RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 AARS2Q5JTZ9 985 aaKnown RBP8.78□□□□□ -1
HDAC3-212ENST00000492407 TTC23LQ6PF05 361 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 OVCH1Q7RTY7 1134 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 PEX26Q7Z412 305 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 PPP1R32Q7Z5V6 425 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 MCATQ8IVS2 390 aaKnown RBP8.78□□□□□ -1
HDAC3-212ENST00000492407 ZNF655Q8N720 491 aaPredicted RBP8.78□□□□□ -1
HDAC3-212ENST00000492407 OR13J1Q8NGT2 312 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 OR2L8Q8NGY9 312 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 PRR7Q8TB68 274 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 PPP4R1Q8TF05 950 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 ZBTB9Q96C00 473 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 ZNF285Q96NJ3 590 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 MFRPQ9BY79 579 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 ILKAPQ9H0C8 392 aaPredicted RBP8.78□□□□□ -1
HDAC3-212ENST00000492407 KLHL25Q9H0H3 589 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 CASS4Q9NQ75 786 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 TFR2Q9UP52 801 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 TDRKHQ9Y2W6 561 aaKnown RBP8.78□□□□□ -1
HDAC3-212ENST00000492407 KLK4Q9Y5K2 254 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 COPG1Q9Y678 874 aaKnown RBP8.78□□□□□ -1
HDAC3-212ENST00000492407 PRSS21Q9Y6M0 314 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 DUSP10Q9Y6W6 482 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 UTP20O75691 2785 aaKnown RBP8.78□□□□□ -1
HDAC3-212ENST00000492407 UQCRHLA0A096LP55 91 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 CCDC162PA2VCL2 907 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 GRID2IPA4D2P6 1211 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 RCCD1A6NED2 376 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 PCDH17O14917 1159 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 DSCR3O14972 297 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 DDX3YO15523 660 aaKnown RBP8.77□□□□□ -1.01
HDAC3-212ENST00000492407 SLCO2B1O94956 709 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 UMODP07911 640 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 UQCRHP07919 91 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 CD9P21926 228 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 TSFMP43897 325 aaKnown RBP8.77□□□□□ -1.01
HDAC3-212ENST00000492407 EMP3P54852 163 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 ELOAQ14241 798 aaKnown RBP8.77□□□□□ -1.01
HDAC3-212ENST00000492407 GRM7Q14831 915 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 TSTD2Q5T7W7 516 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 C1orf189Q5VU69 101 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 FAM69BQ5VUD6 431 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 AGAP7PQ5VUJ5 663 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 PRAMEF13Q5VWM6 474 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 ARMC3Q5W041 872 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 AP1ARQ63HQ0 302 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 B3GNTL1Q67FW5 361 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-212ENST00000492407 FCRL6Q6DN72 434 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 RPUSD3Q6P087 351 aaKnown RBP8.77□□□□□ -1.01
HDAC3-212ENST00000492407 C4orf22Q6V702 233 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 LRRC6Q86X45 466 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 DCUN1D3Q8IWE4 304 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 SLC34A3Q8N130 599 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 MYO1HQ8N1T3 1032 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 MPP5Q8N3R9 675 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 RAB42Q8N4Z0 105 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 DNAAF3Q8N9W5 541 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 RNF214Q8ND24 703 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 ST6GALNAC3Q8NDV1 305 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 OR4L1Q8NH43 312 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 HMGCLL1Q8TB92 370 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 C5orf34Q96MH7 638 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 AGAP4Q96P64 663 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 FAM118BQ9BPY3 351 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 WDR77Q9BQA1 342 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-212ENST00000492407 TMEM121Q9BTD3 319 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 MENTQ9BUN1 341 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 LACRTQ9GZZ8 138 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 SEMA3GQ9NS98 782 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 ASF1BQ9NVP2 202 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 DHCR7Q9UBM7 475 aaKnown RBP8.77□□□□□ -1.01
HDAC3-212ENST00000492407 BLOC1S6Q9UL45 172 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 TMA7Q9Y2S6 64 aaKnown RBP8.77□□□□□ -1.01
HDAC3-212ENST00000492407 PCDHGA10Q9Y5H3 936 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 IKBKGQ9Y6K9 419 aa8.77□□□□□ -1.01
HDAC3-212ENST00000492407 SPTAN1Q13813 2472 aaKnown RBP8.77□□□□□ -1.01
HDAC3-212ENST00000492407 PRRC2CQ9Y520 2896 aaKnown RBP8.77□□□□□ -1.01
HDAC3-212ENST00000492407 ANKUB1A6NFN9 424 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 SOWAHDA6NJG2 315 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 TRIM64CA6NLI5 447 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 VSTM2BA6NLU5 285 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 RASGRF2O14827 1237 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 HCRTR1O43613 425 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 PHF2O75151 1096 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 CNOT3O75175 753 aaKnown RBP8.76□□□□□ -1.01
HDAC3-212ENST00000492407 GOT2P00505 430 aaKnown RBP8.76□□□□□ -1.01
HDAC3-212ENST00000492407 PRSS56P0CW18 603 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 MAGP20916 626 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 ALAS2P22557 587 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 AOAHP28039 575 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 PEBP1P30086 187 aaKnown RBP8.76□□□□□ -1.01
HDAC3-212ENST00000492407 CCR7P32248 378 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 CCNFP41002 786 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 CARSP49589 748 aaKnown RBP8.76□□□□□ -1.01
HDAC3-212ENST00000492407 TTPAP49638 278 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 CLK1P49759 484 aaKnown RBP8.76□□□□□ -1.01
HDAC3-212ENST00000492407 KIF5AQ12840 1032 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 MRPL49Q13405 166 aaKnown RBP8.76□□□□□ -1.01
HDAC3-212ENST00000492407 GRB7Q14451 532 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 TMED2Q15363 201 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms