RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 MAU2Q9Y6X3 613 aa12.65□□□□□ -0.38
USF1-206ENST00000491629 HCFC1P51610 2035 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 FITM1A5D6W6 292 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 OR51F1A6NGY5 319 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 PSTPIP1O43586 416 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 SPOPO43791 374 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 PRICKLE3O43900 615 aaPredicted RBP12.64□□□□□ -0.39
USF1-206ENST00000491629 CTSVO60911 334 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 AP2A2O94973 939 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 MBD3O95983 291 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 HPP00738 406 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 GSTM1P09488 218 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 COX6A1P12074 109 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 TPH1P17752 444 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 CA7P43166 264 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 GSTM4Q03013 218 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 ODF2Q5BJF6 829 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 FIGLAQ6QHK4 219 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 GFRALQ6UXV0 394 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 CCDC50Q8IVM0 306 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 KATNAL2Q8IYT4 538 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 ZNF808Q8N4W9 903 aaPredicted RBP12.64□□□□□ -0.39
USF1-206ENST00000491629 CCDC110Q8TBZ0 833 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 BRIX1Q8TDN6 353 aaKnown RBP12.64□□□□□ -0.39
USF1-206ENST00000491629 ELMO1Q92556 727 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 KRT35Q92764 455 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 MAGEB10Q96LZ2 347 aaPredicted RBP12.64□□□□□ -0.39
USF1-206ENST00000491629 GBP4Q96PP9 640 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 FAM118BQ9BPY3 351 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 TBL1YQ9BQ87 522 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 RUBCNLQ9H714 662 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 SMARCAL1Q9NZC9 954 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 STOX2Q9P2F5 926 aaPredicted RBP12.64□□□□□ -0.39
USF1-206ENST00000491629 SCN3AQ9NY46 2000 aa12.64□□□□□ -0.39
USF1-206ENST00000491629 INTS1Q8N201 2190 aaKnown RBP12.63□□□□□ -0.39
USF1-206ENST00000491629 TRGV8A0A0C4DH27 118 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 H7C0C1 242 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 APOC4-APOC2K7ER74 178 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 CCL21O00585 134 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 AKR1B10O60218 316 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 OR1I1O60431 355 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 UNC5CO95185 931 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 APOC2P02655 101 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 PRR35P0CG20 571 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 PSMA3P25788 255 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 ATP5OP48047 213 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 EFNA3P52797 238 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 CACNG1Q06432 222 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 IRAK1BP1Q5VVH5 260 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 KCTD11Q693B1 232 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 ITPRIPL1Q6GPH6 555 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 FRMPD2BQ6IN97 320 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 ZNF449Q6P9G9 518 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 TAX1BP1Q86VP1 789 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 PRSS58Q8IYP2 241 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 SIRT6Q8N6T7 355 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 OR8K1Q8NGG5 319 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 ACTL9Q8TC94 416 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 STT3BQ8TCJ2 826 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 HAS2Q92819 552 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 CRB3Q9BUF7 120 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 SYNPO2LQ9H987 977 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 PIH1D1Q9NWS0 290 aaKnown RBP12.63□□□□□ -0.39
USF1-206ENST00000491629 PTGFRNQ9P2B2 879 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 AAR2Q9Y312 384 aaKnown RBP12.63□□□□□ -0.39
USF1-206ENST00000491629 ACANP16112 2415 aa12.63□□□□□ -0.39
USF1-206ENST00000491629 LOC105369274A0A096LPK9 316 aa12.62□□□□□ -0.39
USF1-206ENST00000491629 LOC102723532A0A0G2JNH3 316 aa12.62□□□□□ -0.39
USF1-206ENST00000491629 KRT87PA6NCN2 255 aa12.62□□□□□ -0.39
USF1-206ENST00000491629 ZRANB2O95218 330 aaKnown RBP eCLIP12.62□□□□□ -0.39
USF1-206ENST00000491629 ZGLP1P0C6A0 271 aa12.62□□□□□ -0.39
USF1-206ENST00000491629 PIM1P11309 404 aaPredicted RBP12.62□□□□□ -0.39
USF1-206ENST00000491629 COX6B1P14854 86 aa12.62□□□□□ -0.39
USF1-206ENST00000491629 ACPPP15309 386 aa12.62□□□□□ -0.39
USF1-206ENST00000491629 FOXN2P32314 431 aa12.62□□□□□ -0.39
USF1-206ENST00000491629 NSG1P42857 185 aa12.62□□□□□ -0.39
USF1-206ENST00000491629 KIR3DL1P43629 444 aa12.62□□□□□ -0.39
USF1-206ENST00000491629 RAB28P51157 221 aa12.62□□□□□ -0.39
USF1-206ENST00000491629 CSE1LP55060 971 aaKnown RBP12.62□□□□□ -0.39
USF1-206ENST00000491629 YBX1P67809 324 aaKnown RBP12.62□□□□□ -0.39
USF1-206ENST00000491629 ARG2P78540 354 aa12.62□□□□□ -0.39
USF1-206ENST00000491629 VWA2Q5GFL6 755 aa12.62□□□□□ -0.39
USF1-206ENST00000491629 CAVIN1Q6NZI2 390 aaKnown RBP12.62□□□□□ -0.39
USF1-206ENST00000491629 PACS1Q6VY07 963 aa12.62□□□□□ -0.39
USF1-206ENST00000491629 ARHGEF18Q6ZSZ5 1173 aa12.62□□□□□ -0.39
USF1-206ENST00000491629 RCOR2Q8IZ40 523 aa12.62□□□□□ -0.39
USF1-206ENST00000491629 OR4N4Q8N0Y3 316 aa12.62□□□□□ -0.39
USF1-206ENST00000491629 LKAAEAR1Q8TD35 194 aa12.62□□□□□ -0.39
USF1-206ENST00000491629 NHEJ1Q9H9Q4 299 aaPredicted RBP12.62□□□□□ -0.39
USF1-206ENST00000491629 CHST11Q9NPF2 352 aa12.62□□□□□ -0.39
USF1-206ENST00000491629 LUC7LQ9NQ29 371 aaKnown RBP12.62□□□□□ -0.39
USF1-206ENST00000491629 IMPACTQ9P2X3 320 aa12.62□□□□□ -0.39
USF1-206ENST00000491629 SH3BGRL2Q9UJC5 107 aa12.62□□□□□ -0.39
USF1-206ENST00000491629 NXT1Q9UKK6 140 aaKnown RBP12.62□□□□□ -0.39
USF1-206ENST00000491629 TFR2Q9UP52 801 aa12.62□□□□□ -0.39
USF1-206ENST00000491629 ANKHD1Q8IWZ3 2542 aaKnown RBP12.62□□□□□ -0.39
USF1-206ENST00000491629 IGLV3-12A0A075B6K2 115 aa12.61□□□□□ -0.39
USF1-206ENST00000491629 TRAV17A0A0B4J275 112 aa12.61□□□□□ -0.39
USF1-206ENST00000491629 A0A1W2PQ72 361 aa12.61□□□□□ -0.39
USF1-206ENST00000491629 WDPCPO95876 746 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms