RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 SLC5A12Q1EHB4 618 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 PCID2Q5JVF3 399 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 PAPD7Q5XG87 772 aaKnown RBP8.54□□□□□ -1.04
HDAC3-211ENST00000491581 RHBDD2Q6NTF9 364 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 MRPL14Q6P1L8 145 aaKnown RBP8.54□□□□□ -1.04
HDAC3-211ENST00000491581 ZNF549Q6P9A3 640 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 CYB5D1Q6P9G0 228 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 ZNF449Q6P9G9 518 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 FIGLAQ6QHK4 219 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 CENPUQ71F23 418 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 GSTA5Q7RTV2 222 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 LAPTM4BQ86VI4 370 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 CAND1Q86VP6 1230 aaKnown RBP8.54□□□□□ -1.04
HDAC3-211ENST00000491581 PLD3Q8IV08 490 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 DENND6AQ8IWF6 608 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 GPR135Q8IZ08 494 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 CARFQ8N187 725 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 RNF10Q8N5U6 811 aaKnown RBP8.54□□□□□ -1.04
HDAC3-211ENST00000491581 OR8K5Q8NH50 307 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 LPGAT1Q92604 370 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 C8orf44Q96CB5 159 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 CALR3Q96L12 384 aaKnown RBP8.54□□□□□ -1.04
HDAC3-211ENST00000491581 PPP1R2P1Q96PQ5 205 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 PSMG3-AS1Q96PY0 264 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 C19orf43Q9BQ61 176 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 MACROD1Q9BQ69 325 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 CARD6Q9BX69 1037 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 ZNF552Q9H707 407 aaPredicted RBP8.54□□□□□ -1.04
HDAC3-211ENST00000491581 FBXO6Q9NRD1 293 aaPredicted RBP8.54□□□□□ -1.04
HDAC3-211ENST00000491581 ASF1BQ9NVP2 202 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 GPR83Q9NYM4 423 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 OR6C2Q9NZP2 312 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 PAK5Q9P286 719 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 SLC17A6Q9P2U8 582 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 PLCL2Q9UPR0 1127 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 MED16Q9Y2X0 877 aa8.54□□□□□ -1.04
HDAC3-211ENST00000491581 ANKRD12Q6UB98 2062 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 NBPF19A0A087WUL8 3843 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 SCN2AQ99250 2005 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 IGKV1-8A0A0C4DH67 115 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 OR2W5A6NFC9 320 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 ERI2A8K979 691 aaKnown RBP8.53□□□□□ -1.04
HDAC3-211ENST00000491581 ARHGEF33A8MVX0 844 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 C9J4A7 227 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 SOCS6O14544 535 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 PRMT5O14744 637 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-211ENST00000491581 RASGRF2O14827 1237 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 NDUFS3O75489 264 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 RECKO95980 971 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 EIF2S1P05198 315 aaKnown RBP8.53□□□□□ -1.04
HDAC3-211ENST00000491581 MSL3P1P0C860 447 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 AGXTP21549 392 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 FOLR3P41439 243 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 MPP1Q00013 466 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 GPS1Q13098 491 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 CTBP1Q13363 440 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 KIR2DS3Q14952 304 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 NR6A1Q15406 480 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 NKG7Q16617 165 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 VWA2Q5GFL6 755 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 DCAF10Q5QP82 559 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 FAAH2Q6GMR7 532 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 CUZD1Q86UP6 607 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 DCUN1D3Q8IWE4 304 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 PARP9Q8IXQ6 854 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 FAM26EQ8N5C1 309 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 OR2A1Q8NGT9 310 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 OR2L8Q8NGY9 312 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 PRR7Q8TB68 274 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.53□□□□□ -1.044e-6■■■■■ 48.1
HDAC3-211ENST00000491581 LRRC45Q96CN5 670 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 SNRNP40Q96DI7 357 aaKnown RBP8.53□□□□□ -1.04
HDAC3-211ENST00000491581 PWWP2AQ96N64 755 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 SPSB2Q99619 263 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 NDC1Q9BTX1 674 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 TXLNGQ9NUQ3 528 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 ZC3H7BQ9UGR2 993 aaKnown RBP8.53□□□□□ -1.04
HDAC3-211ENST00000491581 POLG2Q9UHN1 485 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 GPN3Q9UHW5 284 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-211ENST00000491581 FBXL4Q9UKA2 621 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 SLC39A10Q9ULF5 831 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 SH2B3Q9UQQ2 575 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 MRPS2Q9Y399 296 aaKnown RBP8.53□□□□□ -1.04
HDAC3-211ENST00000491581 PCDHGA9Q9Y5G4 932 aaKnown RBP8.53□□□□□ -1.04
HDAC3-211ENST00000491581 FLNBO75369 2602 aaKnown RBP8.53□□□□□ -1.04
HDAC3-211ENST00000491581 SCN3AQ9NY46 2000 aa8.53□□□□□ -1.04
HDAC3-211ENST00000491581 FLNCQ14315 2725 aa8.52□□□□□ -1.04
HDAC3-211ENST00000491581 P2RX6O15547 441 aa8.52□□□□□ -1.05
HDAC3-211ENST00000491581 VPS4BO75351 444 aa8.52□□□□□ -1.05
HDAC3-211ENST00000491581 WISP2O76076 250 aa8.52□□□□□ -1.05
HDAC3-211ENST00000491581 GAS8O95995 478 aa8.52□□□□□ -1.05
HDAC3-211ENST00000491581 APOA4P06727 396 aa8.52□□□□□ -1.05
HDAC3-211ENST00000491581 HKDC1Q2TB90 917 aa8.52□□□□□ -1.05
HDAC3-211ENST00000491581 KLHL38Q2WGJ6 581 aa8.52□□□□□ -1.05
HDAC3-211ENST00000491581 DNAJC21Q5F1R6 531 aaKnown RBP8.52□□□□□ -1.05
HDAC3-211ENST00000491581 WASHC2DQ5SRD0 308 aa8.52□□□□□ -1.05
HDAC3-211ENST00000491581 HP1BP3Q5SSJ5 553 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-211ENST00000491581 LYPLAL1Q5VWZ2 237 aa8.52□□□□□ -1.05
HDAC3-211ENST00000491581 FBXO42Q6P3S6 717 aa8.52□□□□□ -1.05
HDAC3-211ENST00000491581 KIRREL2Q6UWL6 708 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms