RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 CDYLQ9Y232 598 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 PIN4Q9Y237 131 aaKnown RBP3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 ANKRD6Q9Y2G4 727 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 PCDHA10Q9Y5I2 948 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 NOX1Q9Y5S8 564 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 PSAT1Q9Y617 370 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 COPG1Q9Y678 874 aaKnown RBP3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 MN1Q10571 1320 aaPredicted RBP3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 TP53BP1Q12888 1972 aaPredicted RBP3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 TNRC18O15417 2968 aaPredicted RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 DENND4AQ7Z401 1863 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 KIAA0100Q14667 2235 aaKnown RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 MYOFQ9NZM1 2061 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 TICRRQ7Z2Z1 1910 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 A0A096LPK6 155 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 ZCWPW2A0A1B0GU75 182 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 DHRS12A0PJE2 317 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 PRSS38A1L453 326 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 MAGEB16A2A368 324 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 C17orf102A2RUQ5 167 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 ISPDA4D126 451 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 CASTOR2A6NHX0 329 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 TRPC5OSA6NMA1 111 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 NT5C1B-RDH14C9J2C7 533 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 H7C0C1 242 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 FXYD1O00168 92 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 HAS3O00219 553 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 CLOCKO15516 846 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 KCNN4O15554 427 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 NBNO60934 754 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 NOL3O60936 208 aaKnown RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 TMEM127O75204 238 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 RECQL4O94761 1208 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 SUPT7LO94864 414 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 PRSS23O95084 383 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 BCL10O95999 233 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 HPRP00739 348 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 CHRNA1P02708 482 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 JUNP05412 331 aaKnown RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 ITGB1P05556 798 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 CHRNGP07510 517 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 APRTP07741 180 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 HOXC6P09630 235 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 OR4Q2P0C623 313 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 ENO3P13929 434 aaPredicted RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 MYOGP15173 224 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 TNNI1P19237 187 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 TFEBP19484 476 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 ITIH1P19827 911 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 GPD1P21695 349 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 MATN1P21941 496 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 CD40P25942 277 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 NFKBIAP25963 317 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 RBL1P28749 1068 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 TKTP29401 623 aaKnown RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 TYK2P29597 1187 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 AXLP30530 894 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 RFC2P35250 354 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 SPRP35270 261 aaPredicted RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 ARL2P36404 184 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 POLR2IP36954 125 aaKnown RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 THPOP40225 353 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 OPRL1P41146 370 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 EIF2DP41214 584 aaKnown RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 PTPN9P43378 593 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 NAMPTP43490 491 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 KIR2DL3P43628 341 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 ATP5OP48047 213 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 LIG4P49917 911 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 ACLYP53396 1101 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 CDH6P55285 790 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 ARPC4P59998 168 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 IFITM2Q01629 132 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 FOXM1Q08050 763 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 CD300CQ08708 224 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 MGAT3Q09327 533 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 GALNT1Q10472 559 aaPredicted RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 BST2Q10589 180 aaKnown RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 AQP6Q13520 282 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 GTF2H3Q13889 308 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 GPNMBQ14956 572 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 PDCD1Q15116 288 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 DLG2Q15700 870 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 NRF1Q16656 503 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 TRIM71Q2Q1W2 868 aaKnown RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 RAB6CQ53S08 254 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 ARL13AQ5H913 290 aaPredicted RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 KCNT1Q5JUK3 1230 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 TMTC4Q5T4D3 741 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 BROXQ5VW32 411 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 GPR107Q5VW38 600 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 JADE1Q6IE81 842 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 PRMT9Q6P2P2 845 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 ISLR2Q6UXK2 745 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 FKBP9P1Q75LS8 142 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 GAREM2Q75VX8 874 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 RHOUQ7L0Q8 258 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 PRSS48Q7RTY5 328 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 PIWIL4Q7Z3Z4 852 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms