RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 PGAM1P18669 254 aa24.03■■□□□ 1.44
HMGN1-217ENST00000489072 PSMB5P28074 263 aa24.03■■□□□ 1.44
HMGN1-217ENST00000489072 CBSP35520 551 aa24.03■■□□□ 1.44
HMGN1-217ENST00000489072 CRYMQ14894 314 aa24.03■■□□□ 1.44
HMGN1-217ENST00000489072 SF1Q15637 639 aaKnown RBP24.03■■□□□ 1.44
HMGN1-217ENST00000489072 HSP90AA5PQ58FG0 334 aa24.03■■□□□ 1.44
HMGN1-217ENST00000489072 PRICKLE2Q7Z3G6 844 aa24.03■■□□□ 1.44
HMGN1-217ENST00000489072 KCNMB4Q86W47 210 aa24.03■■□□□ 1.44
HMGN1-217ENST00000489072 IGDCC3Q8IVU1 814 aa24.03■■□□□ 1.44
HMGN1-217ENST00000489072 LMNTD2Q8IXW0 634 aa24.03■■□□□ 1.44
HMGN1-217ENST00000489072 ZNF655Q8N720 491 aaPredicted RBP24.03■■□□□ 1.44
HMGN1-217ENST00000489072 C9orf43Q8TAL5 461 aaPredicted RBP24.03■■□□□ 1.44
HMGN1-217ENST00000489072 IARS2Q9NSE4 1012 aaKnown RBP24.03■■□□□ 1.44
HMGN1-217ENST00000489072 EURLQ9NYK6 297 aa24.03■■□□□ 1.44
HMGN1-217ENST00000489072 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.03■■□□□ 1.44
HMGN1-217ENST00000489072 MAN2B2Q9Y2E5 1009 aa24.03■■□□□ 1.44
HMGN1-217ENST00000489072 HEMK1Q9Y5R4 338 aaPredicted RBP24.03■■□□□ 1.44
HMGN1-217ENST00000489072 AP1M2Q9Y6Q5 423 aa24.03■■□□□ 1.44
HMGN1-217ENST00000489072 A0A1W2PPV9 198 aa24.02■■□□□ 1.44
HMGN1-217ENST00000489072 ZSCAN9O15535 394 aaPredicted RBP24.02■■□□□ 1.44
HMGN1-217ENST00000489072 PSIP1O75475 530 aaKnown RBP24.02■■□□□ 1.44
HMGN1-217ENST00000489072 HAUS5O94927 633 aa24.02■■□□□ 1.44
HMGN1-217ENST00000489072 CUL1Q13616 776 aa24.02■■□□□ 1.44
HMGN1-217ENST00000489072 FASTKQ14296 549 aaKnown RBP24.02■■□□□ 1.44
HMGN1-217ENST00000489072 CYP2A13Q16696 494 aa24.02■■□□□ 1.44
HMGN1-217ENST00000489072 C1orf189Q5VU69 101 aa24.02■■□□□ 1.44
HMGN1-217ENST00000489072 RHBDD2Q6NTF9 364 aa24.02■■□□□ 1.44
HMGN1-217ENST00000489072 FIGLAQ6QHK4 219 aa24.02■■□□□ 1.44
HMGN1-217ENST00000489072 PCGF5Q86SE9 256 aa24.02■■□□□ 1.44
HMGN1-217ENST00000489072 CALML6Q8TD86 181 aa24.02■■□□□ 1.44
HMGN1-217ENST00000489072 SEC14L1Q92503 715 aa24.02■■□□□ 1.44
HMGN1-217ENST00000489072 KCNJ9Q92806 393 aa24.02■■□□□ 1.44
HMGN1-217ENST00000489072 EBNA1BP2Q99848 306 aaKnown RBP24.02■■□□□ 1.44
HMGN1-217ENST00000489072 FAM167BQ9BTA0 163 aa24.02■■□□□ 1.44
HMGN1-217ENST00000489072 ZNF71Q9NQZ8 489 aaPredicted RBP24.02■■□□□ 1.44
HMGN1-217ENST00000489072 SPATA7Q9P0W8 599 aa24.02■■□□□ 1.44
HMGN1-217ENST00000489072 TCFL5Q9UL49 500 aa24.02■■□□□ 1.44
HMGN1-217ENST00000489072 ANKRD12Q6UB98 2062 aa24.01■■□□□ 1.43
HMGN1-217ENST00000489072 HEATR5BQ9P2D3 2071 aa24.01■■□□□ 1.43
HMGN1-217ENST00000489072 PYCARD-AS1I3L0S3 204 aa24.01■■□□□ 1.43
HMGN1-217ENST00000489072 J3QKU1 62 aa24.01■■□□□ 1.43
HMGN1-217ENST00000489072 GRIA3P42263 894 aa24.01■■□□□ 1.43
HMGN1-217ENST00000489072 PMS2P54278 862 aa24.01■■□□□ 1.43
HMGN1-217ENST00000489072 DR1Q01658 176 aa24.01■■□□□ 1.43
HMGN1-217ENST00000489072 NCF4Q15080 339 aa24.01■■□□□ 1.43
HMGN1-217ENST00000489072 PTRH1Q86Y79 214 aaKnown RBP24.01■■□□□ 1.43
HMGN1-217ENST00000489072 MCATQ8IVS2 390 aaKnown RBP24.01■■□□□ 1.43
HMGN1-217ENST00000489072 RAB42Q8N4Z0 105 aa24.01■■□□□ 1.43
HMGN1-217ENST00000489072 MAGEC3Q8TD91 643 aa24.01■■□□□ 1.43
HMGN1-217ENST00000489072 ADAMTS17Q8TE56 1095 aa24.01■■□□□ 1.43
HMGN1-217ENST00000489072 PWWP2AQ96N64 755 aa24.01■■□□□ 1.43
HMGN1-217ENST00000489072 GBP5Q96PP8 586 aa24.01■■□□□ 1.43
HMGN1-217ENST00000489072 MIPEPQ99797 713 aa24.01■■□□□ 1.43
HMGN1-217ENST00000489072 DPH2Q9BQC3 489 aaPredicted RBP24.01■■□□□ 1.43
HMGN1-217ENST00000489072 TRIM51Q9BSJ1 452 aa24.01■■□□□ 1.43
HMGN1-217ENST00000489072 CCDC68Q9H2F9 335 aa24.01■■□□□ 1.43
HMGN1-217ENST00000489072 PLAC1Q9HBJ0 212 aa24.01■■□□□ 1.43
HMGN1-217ENST00000489072 KLHL42Q9P2K6 505 aa24.01■■□□□ 1.43
HMGN1-217ENST00000489072 DHCR7Q9UBM7 475 aaKnown RBP24.01■■□□□ 1.43
HMGN1-217ENST00000489072 SNX7Q9UNH6 387 aa24.01■■□□□ 1.43
HMGN1-217ENST00000489072 MYO1CO00159 1063 aa24■■□□□ 1.43
HMGN1-217ENST00000489072 SUV39H1O43463 412 aa24■■□□□ 1.43
HMGN1-217ENST00000489072 ERVK-10P10266 1014 aa24■■□□□ 1.43
HMGN1-217ENST00000489072 ERGP11308 486 aa24■■□□□ 1.43
HMGN1-217ENST00000489072 GCGRP47871 477 aa24■■□□□ 1.43
HMGN1-217ENST00000489072 TTLL9Q3SXZ7 439 aa24■■□□□ 1.43
HMGN1-217ENST00000489072 BBS9Q3SYG4 887 aa24■■□□□ 1.43
HMGN1-217ENST00000489072 TLDC1Q6P9B6 456 aa24■■□□□ 1.43
HMGN1-217ENST00000489072 SYDE1Q6ZW31 735 aaPredicted RBP24■■□□□ 1.43
HMGN1-217ENST00000489072 NEK10Q6ZWH5 1172 aa24■■□□□ 1.43
HMGN1-217ENST00000489072 APLFQ8IW19 511 aaPredicted RBP24■■□□□ 1.43
HMGN1-217ENST00000489072 OR2A1Q8NGT9 310 aa24■■□□□ 1.43
HMGN1-217ENST00000489072 OR9A1PQ8NGU1 263 aa24■■□□□ 1.43
HMGN1-217ENST00000489072 CD200R1Q8TD46 325 aa24■■□□□ 1.43
HMGN1-217ENST00000489072 GPR21Q99679 349 aa24■■□□□ 1.43
HMGN1-217ENST00000489072 TRIM55Q9BYV6 548 aa24■■□□□ 1.43
HMGN1-217ENST00000489072 INTS7Q9NVH2 962 aaKnown RBP24■■□□□ 1.43
HMGN1-217ENST00000489072 IRAK4Q9NWZ3 460 aa24■■□□□ 1.43
HMGN1-217ENST00000489072 DHRS7Q9Y394 339 aa24■■□□□ 1.43
HMGN1-217ENST00000489072 PCSK5Q92824 1860 aa23.99■■□□□ 1.43
HMGN1-217ENST00000489072 K7EM74 188 aa23.99■■□□□ 1.43
HMGN1-217ENST00000489072 TTI1O43156 1089 aa23.99■■□□□ 1.43
HMGN1-217ENST00000489072 NRP2O60462 931 aa23.99■■□□□ 1.43
HMGN1-217ENST00000489072 CTSVO60911 334 aa23.99■■□□□ 1.43
HMGN1-217ENST00000489072 RFPL1O75677 317 aa23.99■■□□□ 1.43
HMGN1-217ENST00000489072 DNAJB5O75953 348 aa23.99■■□□□ 1.43
HMGN1-217ENST00000489072 FKBP9O95302 570 aa23.99■■□□□ 1.43
HMGN1-217ENST00000489072 AGXTP21549 392 aa23.99■■□□□ 1.43
HMGN1-217ENST00000489072 YBX1P67809 324 aaKnown RBP23.99■■□□□ 1.43
HMGN1-217ENST00000489072 CPZQ66K79 652 aa23.99■■□□□ 1.43
HMGN1-217ENST00000489072 C2CD4AQ8NCU7 369 aaPredicted RBP23.99■■□□□ 1.43
HMGN1-217ENST00000489072 OR2L3Q8NG85 312 aa23.99■■□□□ 1.43
HMGN1-217ENST00000489072 THAP4Q8WY91 577 aa23.99■■□□□ 1.43
HMGN1-217ENST00000489072 PKP4Q99569 1192 aa23.99■■□□□ 1.43
HMGN1-217ENST00000489072 WDR83Q9BRX9 315 aaKnown RBP23.99■■□□□ 1.43
HMGN1-217ENST00000489072 AARSD1Q9BTE6 412 aaKnown RBP23.99■■□□□ 1.43
HMGN1-217ENST00000489072 TLK1Q9UKI8 766 aa23.99■■□□□ 1.43
HMGN1-217ENST00000489072 SRPK3Q9UPE1 567 aa23.99■■□□□ 1.43
HMGN1-217ENST00000489072 KLK4Q9Y5K2 254 aa23.99■■□□□ 1.43
HMGN1-217ENST00000489072 COMMD10Q9Y6G5 202 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms