RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 ARSFP54793 590 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 RRADP55042 308 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 RPS18P62269 152 aaKnown RBP8.79□□□□□ -1
HDAC6-232ENST00000489053 CALCOCO2Q13137 446 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 CRYMQ14894 314 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 MORF4L2Q15014 288 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 NCF4Q15080 339 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 HIF1AQ16665 826 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 UGT8Q16880 541 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 KLHL38Q2WGJ6 581 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 HSP90AA5PQ58FG0 334 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 TCTE1Q5JU00 501 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 SPANXN3Q5MJ09 141 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 RNASEH2BQ5TBB1 312 aaKnown RBP8.79□□□□□ -1
HDAC6-232ENST00000489053 PRAMEF17Q5VTA0 474 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 ADCK2Q7Z695 626 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 TMEM135Q86UB9 458 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 PTRH1Q86Y79 214 aaKnown RBP8.79□□□□□ -1
HDAC6-232ENST00000489053 MCATQ8IVS2 390 aaKnown RBP8.79□□□□□ -1
HDAC6-232ENST00000489053 DENND6AQ8IWF6 608 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 DSELQ8IZU8 1212 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 BBOF1Q8ND07 529 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 OR9A1PQ8NGU1 263 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 PROKR1Q8TCW9 393 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 SMPDL3AQ92484 453 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 KCNJ9Q92806 393 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 INPP5DQ92835 1189 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 SNF8Q96H20 258 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 MIPEPQ99797 713 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 NLNQ9BYT8 704 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 TRIM31Q9BZY9 425 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 CHRNA10Q9GZZ6 450 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 SPRTNQ9H040 489 aaPredicted RBP8.79□□□□□ -1
HDAC6-232ENST00000489053 EURLQ9NYK6 297 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 RNF14Q9UBS8 474 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 ZC3H7BQ9UGR2 993 aaKnown RBP8.79□□□□□ -1
HDAC6-232ENST00000489053 PCYOX1Q9UHG3 505 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 FBXO5Q9UKT4 447 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 CDYLQ9Y232 598 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 KLHL20Q9Y2M5 609 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 NFS1Q9Y697 457 aa8.79□□□□□ -1
HDAC6-232ENST00000489053 PRRC2CQ9Y520 2896 aaKnown RBP8.79□□□□□ -1
HDAC6-232ENST00000489053 FLNBO75369 2602 aaKnown RBP8.78□□□□□ -1
HDAC6-232ENST00000489053 TENM4Q6N022 2769 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 ARGFXA6NJG6 315 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 USP27XA6NNY8 438 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 EFCAB8A8MWE9 144 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 IGHEP01854 428 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 HIST1H2AGP0C0S8 130 aaPredicted RBP8.78□□□□□ -1
HDAC6-232ENST00000489053 CBSLP0DN79 551 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 PLA2G2AP14555 144 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 HIST1H2ADP20671 130 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 CASQ1P31415 396 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 OTX2P32243 289 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 CBSP35520 551 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 GRIA3P42263 894 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 SKIV2L2P42285 1042 aaKnown RBP8.78□□□□□ -1
HDAC6-232ENST00000489053 CARSP49589 748 aaKnown RBP8.78□□□□□ -1
HDAC6-232ENST00000489053 PMS2P54278 862 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 DHX9Q08211 1270 aaKnown RBP8.78□□□□□ -1
HDAC6-232ENST00000489053 PDAP1Q13442 181 aaKnown RBP8.78□□□□□ -1
HDAC6-232ENST00000489053 CUL1Q13616 776 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 GRM7Q14831 915 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 SLC9A5Q14940 896 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 FAM214AQ32MH5 1076 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 ACSBG2Q5FVE4 666 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 IRAK1BP1Q5VVH5 260 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 PAPD7Q5XG87 772 aaKnown RBP8.78□□□□□ -1
HDAC6-232ENST00000489053 FIGLAQ6QHK4 219 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 TTLL10Q6ZVT0 673 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 UBE2R2Q712K3 238 aaPredicted RBP8.78□□□□□ -1
HDAC6-232ENST00000489053 CENPUQ71F23 418 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 FAM20CQ8IXL6 584 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 MYO1HQ8N1T3 1032 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 TEX19Q8NA77 164 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 LINC01555Q8NAE3 123 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 MCOLN3Q8TDD5 553 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 SLCO2A1Q92959 643 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 RERGQ96A58 199 aaPredicted RBP8.78□□□□□ -1
HDAC6-232ENST00000489053 ZUFSPQ96AP4 578 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 VPS50Q96JG6 964 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 HIST1H2AHQ96KK5 128 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 BIRC8Q96P09 236 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 IP6K3Q96PC2 410 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 KRT12Q99456 494 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 GPR21Q99679 349 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 EBNA1BP2Q99848 306 aaKnown RBP8.78□□□□□ -1
HDAC6-232ENST00000489053 HIST1H2AJQ99878 128 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 TRIM56Q9BRZ2 755 aaKnown RBP8.78□□□□□ -1
HDAC6-232ENST00000489053 H2AFJQ9BTM1 129 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 DHRS4Q9BTZ2 278 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 ACAT2Q9BWD1 397 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 MRPS30Q9NP92 439 aaKnown RBP8.78□□□□□ -1
HDAC6-232ENST00000489053 STARD5Q9NSY2 213 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 PCMTD2Q9NV79 361 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 TAS2R13Q9NYV9 303 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 TXNDC16Q9P2K2 825 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 KLHL42Q9P2K6 505 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 TCFL5Q9UL49 500 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 PTRH2Q9Y3E5 179 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms