RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 TMBIM6P55061 237 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 CLDN8P56748 225 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 ZIK1Q3SY52 487 aaPredicted RBP25.43■■□□□ 1.66
HLA-C-208ENST00000487245 C8orf59Q8N0T1 100 aaPredicted RBP25.43■■□□□ 1.66
HLA-C-208ENST00000487245 RBM4BQ9BQ04 359 aaKnown RBP25.43■■□□□ 1.66
HLA-C-208ENST00000487245 CPPED1Q9BRF8 314 aaPredicted RBP25.43■■□□□ 1.66
HLA-C-208ENST00000487245 RBM4Q9BWF3 364 aaKnown RBP25.43■■□□□ 1.66
HLA-C-208ENST00000487245 TOR3AQ9H497 397 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 DCAF13Q9NV06 445 aaKnown RBP25.43■■□□□ 1.66
HLA-C-208ENST00000487245 FAM118AQ9NWS6 357 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 HEMK1Q9Y5R4 338 aaPredicted RBP25.43■■□□□ 1.66
HLA-C-208ENST00000487245 IRAK3Q9Y616 596 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 KIAA0355O15063 1070 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 ABCB7O75027 752 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 SEC14L2O76054 403 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 AP2A2O94973 939 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 ACRP10323 421 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 PRPS2P11908 318 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 HOXB9P17482 250 aaPredicted RBP25.43■■□□□ 1.66
HLA-C-208ENST00000487245 PTPN2P17706 415 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 CYP2A7P20853 494 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 VIPR1P32241 457 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 CCR2P41597 374 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 GABARAPL2P60520 117 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 SGO1Q5FBB7 561 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 RFLNAQ6ZTI6 216 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 FBXO30Q8TB52 745 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 OR52E6Q96RD3 313 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 MBOAT4Q96T53 435 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 ING2Q9H160 280 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 GALNT8Q9NY28 637 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 TRIM43BA6NCK2 446 aa25.42■■□□□ 1.66
HLA-C-208ENST00000487245 CST1P01037 141 aa25.42■■□□□ 1.66
HLA-C-208ENST00000487245 PCNAP12004 261 aa25.42■■□□□ 1.66
HLA-C-208ENST00000487245 EPORP19235 508 aa25.42■■□□□ 1.66
HLA-C-208ENST00000487245 ELK4P28324 431 aa25.42■■□□□ 1.66
HLA-C-208ENST00000487245 AP1S2P56377 157 aa25.42■■□□□ 1.66
HLA-C-208ENST00000487245 DCDC1P59894 354 aa25.42■■□□□ 1.66
HLA-C-208ENST00000487245 SKIV2LQ15477 1246 aaKnown RBP25.42■■□□□ 1.66
HLA-C-208ENST00000487245 MBOAT1Q6ZNC8 495 aa25.42■■□□□ 1.66
HLA-C-208ENST00000487245 TMEM26Q6ZUK4 368 aa25.42■■□□□ 1.66
HLA-C-208ENST00000487245 Q6ZVU0 165 aa25.42■■□□□ 1.66
HLA-C-208ENST00000487245 KRTCAP2Q8N6L1 136 aa25.42■■□□□ 1.66
HLA-C-208ENST00000487245 CHST14Q8NCH0 376 aa25.42■■□□□ 1.66
HLA-C-208ENST00000487245 CLP1Q92989 425 aaKnown RBP25.42■■□□□ 1.66
HLA-C-208ENST00000487245 FAM162AQ96A26 154 aa25.42■■□□□ 1.66
HLA-C-208ENST00000487245 TRIM43Q96BQ3 446 aaPredicted RBP25.42■■□□□ 1.66
HLA-C-208ENST00000487245 TIFAQ96CG3 184 aa25.42■■□□□ 1.66
HLA-C-208ENST00000487245 HEPHQ9BQS7 1158 aa25.42■■□□□ 1.66
HLA-C-208ENST00000487245 SPHK2Q9NRA0 654 aa25.42■■□□□ 1.66
HLA-C-208ENST00000487245 TDP1Q9NUW8 608 aa25.42■■□□□ 1.66
HLA-C-208ENST00000487245 INVSQ9Y283 1065 aa25.42■■□□□ 1.66
HLA-C-208ENST00000487245 SERTM1A2A2V5 107 aa25.41■■□□□ 1.66
HLA-C-208ENST00000487245 C16orf96A6NNT2 1141 aa25.41■■□□□ 1.66
HLA-C-208ENST00000487245 LINC00271P0C7V0 271 aa25.41■■□□□ 1.66
HLA-C-208ENST00000487245 ACPPP15309 386 aa25.41■■□□□ 1.66
HLA-C-208ENST00000487245 CRHBPP24387 322 aa25.41■■□□□ 1.66
HLA-C-208ENST00000487245 POLR2IP36954 125 aaKnown RBP25.41■■□□□ 1.66
HLA-C-208ENST00000487245 STT3AP46977 705 aa25.41■■□□□ 1.66
HLA-C-208ENST00000487245 RPS14P62263 151 aaKnown RBP25.41■■□□□ 1.66
HLA-C-208ENST00000487245 HTRA4P83105 476 aaPredicted RBP25.41■■□□□ 1.66
HLA-C-208ENST00000487245 PLIN5Q00G26 463 aa25.41■■□□□ 1.66
HLA-C-208ENST00000487245 HSPA14Q0VDF9 509 aa25.41■■□□□ 1.66
HLA-C-208ENST00000487245 PON2Q15165 354 aa25.41■■□□□ 1.66
HLA-C-208ENST00000487245 MSANTD1Q6ZTZ1 278 aa25.41■■□□□ 1.66
HLA-C-208ENST00000487245 ADHFE1Q8IWW8 467 aa25.41■■□□□ 1.66
HLA-C-208ENST00000487245 OR2A12Q8NGT7 310 aa25.41■■□□□ 1.66
HLA-C-208ENST00000487245 OR5K1Q8NHB7 308 aa25.41■■□□□ 1.66
HLA-C-208ENST00000487245 FNDC8Q8TC99 324 aa25.41■■□□□ 1.66
HLA-C-208ENST00000487245 MAGED4Q96JG8 741 aa25.41■■□□□ 1.66
HLA-C-208ENST00000487245 ZFP14Q9HCL3 533 aa25.41■■□□□ 1.66
HLA-C-208ENST00000487245 TMPRSS11EQ9UL52 423 aa25.41■■□□□ 1.66
HLA-C-208ENST00000487245 BRCA2P51587 3418 aa25.41■■□□□ 1.66
HLA-C-208ENST00000487245 GFYI3L273 518 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 CREG1O75629 220 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 MAPK1P28482 360 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 YAP1P46937 504 aaKnown RBP25.4■■□□□ 1.66
HLA-C-208ENST00000487245 SLC6A12P48065 614 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 TOP3AQ13472 1001 aaPredicted RBP25.4■■□□□ 1.66
HLA-C-208ENST00000487245 LRRC26Q2I0M4 334 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 PLA2G4EQ3MJ16 856 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 KIAA0907Q7Z7F0 614 aaPredicted RBP25.4■■□□□ 1.66
HLA-C-208ENST00000487245 ZCCHC7Q8N3Z6 543 aaKnown RBP25.4■■□□□ 1.66
HLA-C-208ENST00000487245 L3MBTL4Q8NA19 623 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 ZNF555Q8NEP9 628 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 MCOLN3Q8TDD5 553 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 PPP1R14BQ96C90 147 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 ACPTQ9BZG2 426 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 FAM83DQ9H4H8 585 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 SERHLQ9NQF3 203 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 HCFC1R1Q9NWW0 138 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 FAF1Q9UNN5 650 aaPredicted RBP25.4■■□□□ 1.66
HLA-C-208ENST00000487245 ERVW-1Q9UQF0 538 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 MAGED1Q9Y5V3 778 aaPredicted RBP25.4■■□□□ 1.66
HLA-C-208ENST00000487245 KCNE1BA0A087WTH5 132 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 SH3PXD2BA1X283 911 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 AREL1O15033 823 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 NOL3O60936 208 aaKnown RBP25.4■■□□□ 1.66
HLA-C-208ENST00000487245 PRKD3O94806 890 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 TYRP14679 529 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms