RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 ZNF180Q9UJW8 692 aa14.14□□□□□ -0.15
LIMS3-205ENST00000487150 PIKFYVEQ9Y2I7 2098 aa14.14□□□□□ -0.15
LIMS3-205ENST00000487150 UNC13CQ8NB66 2214 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 COL27A1Q8IZC6 1860 aaPredicted RBP14.13□□□□□ -0.15
LIMS3-205ENST00000487150 SLC9B1P1A6NJY1 282 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 CAPNS1P04632 268 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 TPBGLP0DKB5 382 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 LIPCP11150 499 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 FGF5P12034 268 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 ETV5P41161 510 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 SERPINB8P50452 374 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 ABATP80404 500 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 MAP7Q14244 749 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 UAP1Q16222 522 aaPredicted RBP14.13□□□□□ -0.15
LIMS3-205ENST00000487150 ST3GAL2Q16842 350 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 ZC3H12BQ5HYM0 836 aaKnown RBP14.13□□□□□ -0.15
LIMS3-205ENST00000487150 BROXQ5VW32 411 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 RAPH1Q70E73 1250 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 TBC1D1Q86TI0 1168 aaPredicted RBP14.13□□□□□ -0.15
LIMS3-205ENST00000487150 LMNTD1Q8N9Z9 388 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 SLC44A1Q8WWI5 657 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 IL17FQ96PD4 163 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 TRAPPC9Q96Q05 1148 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 PKP4Q99569 1192 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 CCDC77Q9BR77 488 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 CCDC177Q9NQR7 707 aaPredicted RBP14.13□□□□□ -0.15
LIMS3-205ENST00000487150 ARL15Q9NXU5 204 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 SPHK1Q9NYA1 384 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 CTNNAL1Q9UBT7 734 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 FETUBQ9UGM5 382 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 SERTAD3Q9UJW9 196 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 KLK4Q9Y5K2 254 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 B3GALT1Q9Y5Z6 326 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 ACACBO00763 2458 aa14.13□□□□□ -0.15
LIMS3-205ENST00000487150 A0A087WV48 116 aa14.12□□□□□ -0.15
LIMS3-205ENST00000487150 A0A087X1B8 175 aa14.12□□□□□ -0.15
LIMS3-205ENST00000487150 EXOC1LA0A1B0GW35 172 aa14.12□□□□□ -0.15
LIMS3-205ENST00000487150 TARM1B6A8C7 271 aa14.12□□□□□ -0.15
LIMS3-205ENST00000487150 C9orf172C9J069 976 aa14.12□□□□□ -0.15
LIMS3-205ENST00000487150 KRT37O76014 449 aa14.12□□□□□ -0.15
LIMS3-205ENST00000487150 MT-ND3P03897 115 aa14.12□□□□□ -0.15
LIMS3-205ENST00000487150 ST6GAL1P15907 406 aa14.12□□□□□ -0.15
LIMS3-205ENST00000487150 HRH2P25021 359 aa14.12□□□□□ -0.15
LIMS3-205ENST00000487150 MSH2P43246 934 aa14.12□□□□□ -0.15
LIMS3-205ENST00000487150 HNMTP50135 292 aa14.12□□□□□ -0.15
LIMS3-205ENST00000487150 CDKL1Q00532 357 aa14.12□□□□□ -0.15
LIMS3-205ENST00000487150 GPR135Q8IZ08 494 aa14.12□□□□□ -0.15
LIMS3-205ENST00000487150 DENND1AQ8TEH3 1009 aa14.12□□□□□ -0.15
LIMS3-205ENST00000487150 ZUFSPQ96AP4 578 aa14.12□□□□□ -0.15
LIMS3-205ENST00000487150 PAFAH2Q99487 392 aa14.12□□□□□ -0.15
LIMS3-205ENST00000487150 ULBP3Q9BZM4 244 aa14.12□□□□□ -0.15
LIMS3-205ENST00000487150 TLK1Q9UKI8 766 aa14.12□□□□□ -0.15
LIMS3-205ENST00000487150 ZMIZ1Q9ULJ6 1067 aa14.12□□□□□ -0.15
LIMS3-205ENST00000487150 PDE10AQ9Y233 779 aa14.12□□□□□ -0.15
LIMS3-205ENST00000487150 RAXQ9Y2V3 346 aa14.12□□□□□ -0.15
LIMS3-205ENST00000487150 MTO1Q9Y2Z2 717 aaKnown RBP14.12□□□□□ -0.15
LIMS3-205ENST00000487150 PMS2P1A4D2B8 440 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 AGRPO00253 132 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 RIPK2O43353 540 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 PIAS1O75925 651 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 HBQ1P09105 142 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 EBLN1P0CF75 366 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 FOLR1P15328 257 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 PEBP1P30086 187 aaKnown RBP14.11□□□□□ -0.15
LIMS3-205ENST00000487150 DEKP35659 375 aaKnown RBP14.11□□□□□ -0.15
LIMS3-205ENST00000487150 EIF2S3P41091 472 aaKnown RBP14.11□□□□□ -0.15
LIMS3-205ENST00000487150 SH3BP2P78314 561 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 EFTUD2Q15029 972 aaKnown RBP eCLIP14.11□□□□□ -0.15
LIMS3-205ENST00000487150 CCSMST1Q4G0I0 132 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 CDKL4Q5MAI5 379 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 THEMIS2Q5TEJ8 643 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 CAPN13Q6MZZ7 669 aaPredicted RBP14.11□□□□□ -0.15
LIMS3-205ENST00000487150 KLC3Q6P597 504 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 TAX1BP1Q86VP1 789 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 CEP97Q8IW35 865 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 TCAIMQ8N3R3 496 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 ESX1Q8N693 406 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 LRRN4CLQ8ND94 238 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 OR2L3Q8NG85 312 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 FLVCR1-AS1Q8TAF5 88 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 ZNF480Q8WV37 535 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 FBXL8Q96CD0 374 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 MTBPQ96DY7 904 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 HAUS8Q9BT25 410 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 EFHD1Q9BUP0 239 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 FAM117AQ9C073 453 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 MRPS30Q9NP92 439 aaKnown RBP14.11□□□□□ -0.15
LIMS3-205ENST00000487150 FOXJ2Q9P0K8 574 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 STOX2Q9P2F5 926 aaPredicted RBP14.11□□□□□ -0.15
LIMS3-205ENST00000487150 CIDEBQ9UHD4 219 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 SRPK3Q9UPE1 567 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 TMEM184BQ9Y519 407 aaPredicted RBP14.11□□□□□ -0.15
LIMS3-205ENST00000487150 OARD1Q9Y530 152 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 AP1M2Q9Y6Q5 423 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 TPRP12270 2363 aaKnown RBP14.11□□□□□ -0.15
LIMS3-205ENST00000487150 FREM2Q5SZK8 3169 aa14.11□□□□□ -0.15
LIMS3-205ENST00000487150 E7ENX8 843 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 CPNE3O75131 537 aaKnown RBP14.1□□□□□ -0.15
LIMS3-205ENST00000487150 STK17BO94768 372 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 S100BP04271 92 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms