RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 TDRKHQ9Y2W6 561 aaKnown RBP7.31□□□□□ -1.24
PDPN-205ENST00000487038 FAM169AQ9Y6X4 670 aa7.31□□□□□ -1.24
PDPN-205ENST00000487038 GTF3C1Q12789 2109 aa7.31□□□□□ -1.24
PDPN-205ENST00000487038 SCN2AQ99250 2005 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 IGHV1-45A0A0A0MS14 117 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 LRRD1A4D1F6 860 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 AGAP14A8MT82 685 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 QSOX1O00391 747 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 RASGRF2O14827 1237 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 SGTAO43765 313 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 CRTAMO95727 393 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 AP2A1O95782 977 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 NFKB1P19838 968 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 FBLP22087 321 aaKnown RBP7.3□□□□□ -1.24
PDPN-205ENST00000487038 KDELR1P24390 212 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 PTPN3P26045 913 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 EEF1DP29692 281 aaKnown RBP7.3□□□□□ -1.24
PDPN-205ENST00000487038 PDHA2P29803 388 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 CHRNA4P43681 627 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 OR1D4P47884 311 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 PCOLCEQ15113 449 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 TAF1AQ15573 450 aaPredicted RBP7.3□□□□□ -1.24
PDPN-205ENST00000487038 ATG9BQ674R7 924 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 SLC9A4Q6AI14 798 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 KDELC1Q6UW63 502 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 NEK10Q6ZWH5 1172 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 MCATQ8IVS2 390 aaKnown RBP7.3□□□□□ -1.24
PDPN-205ENST00000487038 GHDCQ8N2G8 530 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 METTL27Q8N6F8 245 aaPredicted RBP7.3□□□□□ -1.24
PDPN-205ENST00000487038 DNAAF3Q8N9W5 541 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 TMEM178AQ8NBL3 297 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 OR4K2Q8NGD2 314 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 FLVCR1-AS1Q8TAF5 88 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 AGAP11Q8TF27 550 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 NAT14Q8WUY8 206 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.3□□□□□ -1.24
PDPN-205ENST00000487038 ASB5Q8WWX0 329 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 PSMF1Q92530 271 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 MRGPRX2Q96LB1 330 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 NRTNQ99748 197 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 ANP32EQ9BTT0 268 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 REPIN1Q9BWE0 567 aaKnown RBP7.3□□□□□ -1.24
PDPN-205ENST00000487038 C14orf105Q9NVL8 296 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 SPHK1Q9NYA1 384 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 STMN3Q9NZ72 180 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 KLHL8Q9P2G9 620 aaPredicted RBP7.3□□□□□ -1.24
PDPN-205ENST00000487038 KCNN3Q9UGI6 736 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 FKBPLQ9UIM3 349 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 PPT2Q9UMR5 302 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 ARL5AQ9Y689 179 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 BZW2Q9Y6E2 419 aaKnown RBP7.3□□□□□ -1.24
PDPN-205ENST00000487038 MAU2Q9Y6X3 613 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 MXRA5Q9NR99 2828 aa7.3□□□□□ -1.24
PDPN-205ENST00000487038 PHF3Q92576 2039 aaKnown RBP7.3□□□□□ -1.24
PDPN-205ENST00000487038 A0A1W2PQ72 361 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 FITM1A5D6W6 292 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 RCCD1A6NED2 376 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 C5orf60A6NFR6 353 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 LRRC10BA6NIK2 292 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 IDSB3KWA1 339 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 SRPX2O60687 465 aaPredicted RBP7.29□□□□□ -1.24
PDPN-205ENST00000487038 PROSCO94903 275 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 FKBP9O95302 570 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 S1PR4O95977 384 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 FTH1P02794 183 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 RPN2P04844 631 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 CYP1A2P05177 515 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 ERVK-10P10266 1014 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 CD46P15529 392 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 IGFBP2P18065 325 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 EMP2P54851 167 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 PLOD1Q02809 727 aaPredicted RBP7.29□□□□□ -1.24
PDPN-205ENST00000487038 SRSF11Q05519 484 aaKnown RBP7.29□□□□□ -1.24
PDPN-205ENST00000487038 MYBPHQ13203 477 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 MUM1Q2TAK8 710 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 GPR33Q49SQ1 333 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 BIVMQ86UB2 503 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 RFX6Q8HWS3 928 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 TMTC1Q8IUR5 882 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 PRSS58Q8IYP2 241 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 HORMAD2Q8N7B1 307 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 TFB1MQ8WVM0 346 aaKnown RBP7.29□□□□□ -1.24
PDPN-205ENST00000487038 ELMO1Q92556 727 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 LRRC45Q96CN5 670 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 FCRL5Q96RD9 977 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 VAT1Q99536 393 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 C19orf43Q9BQ61 176 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 TUBB6Q9BUF5 446 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 ENAMQ9NRM1 1142 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 ZDHHC3Q9NYG2 299 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 CTTNBP2NLQ9P2B4 639 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 UVRAGQ9P2Y5 699 aa7.29□□□□□ -1.24
PDPN-205ENST00000487038 INTS1Q8N201 2190 aaKnown RBP7.29□□□□□ -1.24
PDPN-205ENST00000487038 IGLV3-12A0A075B6K2 115 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 HYKKA2RU49 373 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 NPIPA5E9PKD4 350 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 F8W8V4 182 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 AP2A2O94973 939 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 HEXBP07686 556 aa7.28□□□□□ -1.24
PDPN-205ENST00000487038 ITGAMP11215 1152 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms