RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 OTOAQ7RTW8 1153 aa23.57■■□□□ 1.36
LIME1-206ENST00000487026 RBMXL3Q8N7X1 1067 aaKnown RBP23.57■■□□□ 1.36
LIME1-206ENST00000487026 Q8NA96 180 aa23.57■■□□□ 1.36
LIME1-206ENST00000487026 FAM136AQ96C01 138 aa23.57■■□□□ 1.36
LIME1-206ENST00000487026 MAP4K5Q9Y4K4 846 aa23.57■■□□□ 1.36
LIME1-206ENST00000487026 UTP20O75691 2785 aaKnown RBP23.56■■□□□ 1.36
LIME1-206ENST00000487026 PEX12O00623 359 aa23.56■■□□□ 1.36
LIME1-206ENST00000487026 PRICKLE3O43900 615 aaPredicted RBP23.56■■□□□ 1.36
LIME1-206ENST00000487026 AVILO75366 819 aa23.56■■□□□ 1.36
LIME1-206ENST00000487026 UMODP07911 640 aa23.56■■□□□ 1.36
LIME1-206ENST00000487026 PSMB5P28074 263 aa23.56■■□□□ 1.36
LIME1-206ENST00000487026 GCGRP47871 477 aa23.56■■□□□ 1.36
LIME1-206ENST00000487026 VPS41P49754 854 aa23.56■■□□□ 1.36
LIME1-206ENST00000487026 INPP5JQ15735 1006 aaPredicted RBP23.56■■□□□ 1.36
LIME1-206ENST00000487026 CNSTQ6PJW8 725 aa23.56■■□□□ 1.36
LIME1-206ENST00000487026 ZNF662Q6ZS27 426 aa23.56■■□□□ 1.36
LIME1-206ENST00000487026 PPP1R32Q7Z5V6 425 aa23.56■■□□□ 1.36
LIME1-206ENST00000487026 LRRC6Q86X45 466 aa23.56■■□□□ 1.36
LIME1-206ENST00000487026 MPP5Q8N3R9 675 aa23.56■■□□□ 1.36
LIME1-206ENST00000487026 RAD51AP1Q96B01 352 aa23.56■■□□□ 1.36
LIME1-206ENST00000487026 PTERQ96BW5 349 aa23.56■■□□□ 1.36
LIME1-206ENST00000487026 BIRC8Q96P09 236 aa23.56■■□□□ 1.36
LIME1-206ENST00000487026 IP6K3Q96PC2 410 aa23.56■■□□□ 1.36
LIME1-206ENST00000487026 SMAD5Q99717 465 aaKnown RBP23.56■■□□□ 1.36
LIME1-206ENST00000487026 INTS7Q9NVH2 962 aaKnown RBP23.56■■□□□ 1.36
LIME1-206ENST00000487026 P4HTMQ9NXG6 502 aa23.56■■□□□ 1.36
LIME1-206ENST00000487026 AP3B1O00203 1094 aa23.55■■□□□ 1.36
LIME1-206ENST00000487026 KPNA5O15131 536 aa23.55■■□□□ 1.36
LIME1-206ENST00000487026 NIPSNAP2O75323 286 aa23.55■■□□□ 1.36
LIME1-206ENST00000487026 CD63P08962 238 aa23.55■■□□□ 1.36
LIME1-206ENST00000487026 TPSB2P20231 275 aa23.55■■□□□ 1.36
LIME1-206ENST00000487026 TPSAB1Q15661 275 aa23.55■■□□□ 1.36
LIME1-206ENST00000487026 DCAF10Q5QP82 559 aa23.55■■□□□ 1.36
LIME1-206ENST00000487026 SLC6A19Q695T7 634 aa23.55■■□□□ 1.36
LIME1-206ENST00000487026 SDCCAG8Q86SQ7 713 aaPredicted RBP23.55■■□□□ 1.36
LIME1-206ENST00000487026 PRELID2Q8N945 189 aa23.55■■□□□ 1.36
LIME1-206ENST00000487026 GALNT11Q8NCW6 608 aa23.55■■□□□ 1.36
LIME1-206ENST00000487026 ZDHHC19Q8WVZ1 309 aaPredicted RBP23.55■■□□□ 1.36
LIME1-206ENST00000487026 DLG3Q92796 817 aa23.55■■□□□ 1.36
LIME1-206ENST00000487026 FER1L6-AS2Q96M78 137 aa23.55■■□□□ 1.36
LIME1-206ENST00000487026 MIPEPQ99797 713 aa23.55■■□□□ 1.36
LIME1-206ENST00000487026 MRM3Q9HC36 420 aaKnown RBP23.55■■□□□ 1.36
LIME1-206ENST00000487026 SLAMF7Q9NQ25 335 aa23.55■■□□□ 1.36
LIME1-206ENST00000487026 GALPQ9UBC7 116 aa23.55■■□□□ 1.36
LIME1-206ENST00000487026 SOX13Q9UN79 622 aa23.55■■□□□ 1.36
LIME1-206ENST00000487026 CRYL1Q9Y2S2 319 aa23.55■■□□□ 1.36
LIME1-206ENST00000487026 USP9YO00507 2555 aaPredicted RBP23.54■■□□□ 1.36
LIME1-206ENST00000487026 CTSVO60911 334 aa23.54■■□□□ 1.36
LIME1-206ENST00000487026 ARSFP54793 590 aa23.54■■□□□ 1.36
LIME1-206ENST00000487026 ZC3H12BQ5HYM0 836 aaKnown RBP23.54■■□□□ 1.36
LIME1-206ENST00000487026 MRNIPQ6NTE8 343 aa23.54■■□□□ 1.36
LIME1-206ENST00000487026 LRRC8AQ8IWT6 810 aa23.54■■□□□ 1.36
LIME1-206ENST00000487026 GALNT16Q8N428 558 aa23.54■■□□□ 1.36
LIME1-206ENST00000487026 CLEC1AQ8NC01 280 aa23.54■■□□□ 1.36
LIME1-206ENST00000487026 TRIM58Q8NG06 486 aa23.54■■□□□ 1.36
LIME1-206ENST00000487026 DENND1AQ8TEH3 1009 aa23.54■■□□□ 1.36
LIME1-206ENST00000487026 LPGAT1Q92604 370 aa23.54■■□□□ 1.36
LIME1-206ENST00000487026 TRIM56Q9BRZ2 755 aaKnown RBP23.54■■□□□ 1.36
LIME1-206ENST00000487026 CUTCQ9NTM9 273 aa23.54■■□□□ 1.36
LIME1-206ENST00000487026 A0A1B0GX78 115 aa23.53■■□□□ 1.36
LIME1-206ENST00000487026 NRP2O60462 931 aa23.53■■□□□ 1.36
LIME1-206ENST00000487026 YBX1P67809 324 aaKnown RBP23.53■■□□□ 1.36
LIME1-206ENST00000487026 CDK16Q00536 496 aa23.53■■□□□ 1.36
LIME1-206ENST00000487026 DTWD1Q8N5C7 304 aa23.53■■□□□ 1.36
LIME1-206ENST00000487026 METTL27Q8N6F8 245 aaPredicted RBP23.53■■□□□ 1.36
LIME1-206ENST00000487026 ZUFSPQ96AP4 578 aa23.53■■□□□ 1.36
LIME1-206ENST00000487026 FOPNLQ96NB1 174 aa23.53■■□□□ 1.36
LIME1-206ENST00000487026 SELENOSQ9BQE4 189 aa23.53■■□□□ 1.36
LIME1-206ENST00000487026 RAB11FIP5Q9BXF6 653 aa23.53■■□□□ 1.36
LIME1-206ENST00000487026 IL1RAPL1Q9NZN1 696 aa23.53■■□□□ 1.36
LIME1-206ENST00000487026 MAP10Q9P2G4 905 aa23.53■■□□□ 1.36
LIME1-206ENST00000487026 ANKRD12Q6UB98 2062 aa23.52■■□□□ 1.36
LIME1-206ENST00000487026 BLACEA4D250 179 aa23.52■■□□□ 1.36
LIME1-206ENST00000487026 DSCR3O14972 297 aa23.52■■□□□ 1.36
LIME1-206ENST00000487026 F7P08709 466 aaPredicted RBP23.52■■□□□ 1.36
LIME1-206ENST00000487026 OR1D4P47884 311 aa23.52■■□□□ 1.36
LIME1-206ENST00000487026 VSX2P58304 361 aaPredicted RBP23.52■■□□□ 1.36
LIME1-206ENST00000487026 GPS1Q13098 491 aa23.52■■□□□ 1.36
LIME1-206ENST00000487026 FASTKQ14296 549 aaKnown RBP23.52■■□□□ 1.36
LIME1-206ENST00000487026 KCNJ11Q14654 390 aa23.52■■□□□ 1.36
LIME1-206ENST00000487026 TYSND1Q2T9J0 566 aa23.52■■□□□ 1.36
LIME1-206ENST00000487026 PLEKHN1Q494U1 663 aaPredicted RBP23.52■■□□□ 1.36
LIME1-206ENST00000487026 VWA5B1Q5TIE3 1220 aa23.52■■□□□ 1.36
LIME1-206ENST00000487026 ANKRD22Q5VYY1 191 aa23.52■■□□□ 1.36
LIME1-206ENST00000487026 FRMPD2BQ6IN97 320 aa23.52■■□□□ 1.36
LIME1-206ENST00000487026 SHISA6Q6ZSJ9 500 aa23.52■■□□□ 1.36
LIME1-206ENST00000487026 OVCH1Q7RTY7 1134 aa23.52■■□□□ 1.36
LIME1-206ENST00000487026 HPS6Q86YV9 775 aa23.52■■□□□ 1.36
LIME1-206ENST00000487026 SPNS2Q8IVW8 549 aa23.52■■□□□ 1.36
LIME1-206ENST00000487026 PNPLA2Q96AD5 504 aa23.52■■□□□ 1.36
LIME1-206ENST00000487026 HOMER3Q9NSC5 361 aa23.52■■□□□ 1.36
LIME1-206ENST00000487026 SHANK1Q9Y566 2161 aa23.51■■□□□ 1.35
LIME1-206ENST00000487026 A0A1W2PPV9 198 aa23.51■■□□□ 1.35
LIME1-206ENST00000487026 TARM1B6A8C7 271 aa23.51■■□□□ 1.35
LIME1-206ENST00000487026 ALOX12BO75342 701 aa23.51■■□□□ 1.35
LIME1-206ENST00000487026 CHRM3P20309 590 aa23.51■■□□□ 1.35
LIME1-206ENST00000487026 CCZ1BP86790 482 aa23.51■■□□□ 1.35
LIME1-206ENST00000487026 CCZ1P86791 482 aaPredicted RBP23.51■■□□□ 1.35
LIME1-206ENST00000487026 GRM7Q14831 915 aa23.51■■□□□ 1.35
LIME1-206ENST00000487026 MYBPC3Q14896 1274 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms