RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 FRS2Q8WU20 508 aa17.1■□□□□ 0.33
TNXB-205ENST00000486148 HDAC2Q92769 488 aaKnown RBP17.1■□□□□ 0.33
TNXB-205ENST00000486148 SCLYQ96I15 445 aa17.1■□□□□ 0.33
TNXB-205ENST00000486148 ALPK1Q96QP1 1244 aa17.1■□□□□ 0.33
TNXB-205ENST00000486148 SH3GL1Q99961 368 aa17.1■□□□□ 0.33
TNXB-205ENST00000486148 USE1Q9NZ43 259 aa17.1■□□□□ 0.33
TNXB-205ENST00000486148 SCHIP1Q9P0W5 487 aaPredicted RBP17.1■□□□□ 0.33
TNXB-205ENST00000486148 DAPK2Q9UIK4 370 aa17.1■□□□□ 0.33
TNXB-205ENST00000486148 POU2F3Q9UKI9 436 aa17.1■□□□□ 0.33
TNXB-205ENST00000486148 NPIPB15A6NHN6 443 aaPredicted RBP17.09■□□□□ 0.33
TNXB-205ENST00000486148 FAM47E-STBD1D6RA91 191 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 NOL3O60936 208 aaKnown RBP17.09■□□□□ 0.33
TNXB-205ENST00000486148 CLDN9O95484 217 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 SERPINA1P01009 418 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 MAP4P27816 1152 aaKnown RBP17.09■□□□□ 0.33
TNXB-205ENST00000486148 DCTP40126 519 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 NEK2P51955 445 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 TMBIM6P55061 237 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 TPD52P55327 224 aaPredicted RBP17.09■□□□□ 0.33
TNXB-205ENST00000486148 CD47Q08722 323 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 SKIV2LQ15477 1246 aaKnown RBP17.09■□□□□ 0.33
TNXB-205ENST00000486148 TXNDC8Q6A555 127 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 TPGS1Q6ZTW0 290 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 CALHM3Q86XJ0 350 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 SVOPLQ8N434 492 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 ZNF555Q8NEP9 628 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 CSF3RQ99062 836 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 RBM4BQ9BQ04 359 aaKnown RBP17.09■□□□□ 0.33
TNXB-205ENST00000486148 CPPED1Q9BRF8 314 aaPredicted RBP17.09■□□□□ 0.33
TNXB-205ENST00000486148 C2orf49Q9BVC5 232 aaPredicted RBP17.09■□□□□ 0.33
TNXB-205ENST00000486148 RBM4Q9BWF3 364 aaKnown RBP17.09■□□□□ 0.33
TNXB-205ENST00000486148 SRRDQ9UH36 339 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 U3KQV3 271 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 SCN5AQ14524 2016 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 A8MU76 341 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 HS6ST1O60243 411 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 ZNF821O75541 412 aaPredicted RBP17.09■□□□□ 0.33
TNXB-205ENST00000486148 TCEA1P23193 301 aaKnown RBP17.09■□□□□ 0.33
TNXB-205ENST00000486148 TACR1P25103 407 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 RPS14P62263 151 aaKnown RBP17.09■□□□□ 0.33
TNXB-205ENST00000486148 INAQ16352 499 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 SMUG1Q53HV7 270 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 LYPLAL1Q5VWZ2 237 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 ATG9BQ674R7 924 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 RETSATQ6NUM9 610 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 Q6ZNB5 142 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 NAT16Q8N8M0 369 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 IGSF21Q96ID5 467 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 NDEL1Q9GZM8 345 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 EHD1Q9H4M9 534 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 ZNF334Q9HCZ1 680 aaPredicted RBP17.09■□□□□ 0.33
TNXB-205ENST00000486148 EXD2Q9NVH0 621 aa17.09■□□□□ 0.33
TNXB-205ENST00000486148 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.08■□□□□ 0.33
TNXB-205ENST00000486148 FAM220BPB1ANY3 271 aa17.08■□□□□ 0.33
TNXB-205ENST00000486148 RETP07949 1114 aa17.08■□□□□ 0.33
TNXB-205ENST00000486148 MYCLP1P12525 358 aaPredicted RBP17.08■□□□□ 0.33
TNXB-205ENST00000486148 GSTM2P28161 218 aa17.08■□□□□ 0.33
TNXB-205ENST00000486148 IDUAP35475 653 aa17.08■□□□□ 0.33
TNXB-205ENST00000486148 CDKN2CP42773 168 aa17.08■□□□□ 0.33
TNXB-205ENST00000486148 RPIAP49247 311 aa17.08■□□□□ 0.33
TNXB-205ENST00000486148 BFSP2Q13515 415 aa17.08■□□□□ 0.33
TNXB-205ENST00000486148 GTF2IRD2BQ6EKJ0 949 aa17.08■□□□□ 0.33
TNXB-205ENST00000486148 RFLNAQ6ZTI6 216 aa17.08■□□□□ 0.33
TNXB-205ENST00000486148 GTF2IRD2Q86UP8 949 aa17.08■□□□□ 0.33
TNXB-205ENST00000486148 SLC22A15Q8IZD6 547 aa17.08■□□□□ 0.33
TNXB-205ENST00000486148 FAM120BQ96EK7 910 aaKnown RBP17.08■□□□□ 0.33
TNXB-205ENST00000486148 TSSK3Q96PN8 268 aa17.08■□□□□ 0.33
TNXB-205ENST00000486148 CTRCQ99895 268 aa17.08■□□□□ 0.33
TNXB-205ENST00000486148 HERC2P3Q9BVR0 1158 aa17.08■□□□□ 0.33
TNXB-205ENST00000486148 SLC29A3Q9BZD2 475 aa17.08■□□□□ 0.33
TNXB-205ENST00000486148 PARVBQ9HBI1 364 aa17.08■□□□□ 0.33
TNXB-205ENST00000486148 ARL15Q9NXU5 204 aa17.08■□□□□ 0.33
TNXB-205ENST00000486148 PDE10AQ9Y233 779 aa17.08■□□□□ 0.33
TNXB-205ENST00000486148 LATS1O95835 1130 aa17.08■□□□□ 0.32
TNXB-205ENST00000486148 ANXA5P08758 320 aa17.08■□□□□ 0.32
TNXB-205ENST00000486148 PFKLP17858 780 aa17.08■□□□□ 0.32
TNXB-205ENST00000486148 PLA2G16P53816 162 aa17.08■□□□□ 0.32
TNXB-205ENST00000486148 B4GALNT1Q00973 533 aa17.08■□□□□ 0.32
TNXB-205ENST00000486148 TTLL9Q3SXZ7 439 aa17.08■□□□□ 0.32
TNXB-205ENST00000486148 GPR33Q49SQ1 333 aa17.08■□□□□ 0.32
TNXB-205ENST00000486148 DGKKQ5KSL6 1271 aa17.08■□□□□ 0.32
TNXB-205ENST00000486148 LDLRAP1Q5SW96 308 aa17.08■□□□□ 0.32
TNXB-205ENST00000486148 LRIF1Q5T3J3 769 aa17.08■□□□□ 0.32
TNXB-205ENST00000486148 CCDC138Q96M89 665 aa17.08■□□□□ 0.32
TNXB-205ENST00000486148 MROQ9BYG7 248 aa17.08■□□□□ 0.32
TNXB-205ENST00000486148 MBD1Q9UIS9 605 aaPredicted RBP17.08■□□□□ 0.32
TNXB-205ENST00000486148 PPT2Q9UMR5 302 aa17.08■□□□□ 0.32
TNXB-205ENST00000486148 KPNA4O00629 521 aaPredicted RBP17.07■□□□□ 0.32
TNXB-205ENST00000486148 KRT6AP02538 564 aa17.07■□□□□ 0.32
TNXB-205ENST00000486148 C1QCP02747 245 aa17.07■□□□□ 0.32
TNXB-205ENST00000486148 KRT6BP04259 564 aa17.07■□□□□ 0.32
TNXB-205ENST00000486148 PTPN6P29350 595 aa17.07■□□□□ 0.32
TNXB-205ENST00000486148 CCR7P32248 378 aa17.07■□□□□ 0.32
TNXB-205ENST00000486148 KRT6CP48668 564 aa17.07■□□□□ 0.32
TNXB-205ENST00000486148 CLDN8P56748 225 aa17.07■□□□□ 0.32
TNXB-205ENST00000486148 VAC14Q08AM6 782 aa17.07■□□□□ 0.32
TNXB-205ENST00000486148 VEPH1Q14D04 833 aa17.07■□□□□ 0.32
TNXB-205ENST00000486148 DPY19L1Q2PZI1 675 aa17.07■□□□□ 0.32
TNXB-205ENST00000486148 METTL2BQ6P1Q9 378 aaKnown RBP17.07■□□□□ 0.32
TNXB-205ENST00000486148 CRTC1Q6UUV9 634 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms