RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 ARMC3Q5W041 872 aa16.99■□□□□ 0.31
COL6A1-204ENST00000486023 ZNF549Q6P9A3 640 aa16.99■□□□□ 0.31
COL6A1-204ENST00000486023 FIGLAQ6QHK4 219 aa16.99■□□□□ 0.31
COL6A1-204ENST00000486023 MCATQ8IVS2 390 aaKnown RBP16.99■□□□□ 0.31
COL6A1-204ENST00000486023 DNAJC22Q8N4W6 341 aa16.99■□□□□ 0.31
COL6A1-204ENST00000486023 C9orf43Q8TAL5 461 aaPredicted RBP16.99■□□□□ 0.31
COL6A1-204ENST00000486023 CALML6Q8TD86 181 aa16.99■□□□□ 0.31
COL6A1-204ENST00000486023 TRIM51Q9BSJ1 452 aa16.99■□□□□ 0.31
COL6A1-204ENST00000486023 RAB11FIP5Q9BXF6 653 aa16.99■□□□□ 0.31
COL6A1-204ENST00000486023 TRIM4Q9C037 500 aa16.99■□□□□ 0.31
COL6A1-204ENST00000486023 TXLNGQ9NUQ3 528 aa16.99■□□□□ 0.31
COL6A1-204ENST00000486023 INTS7Q9NVH2 962 aaKnown RBP16.99■□□□□ 0.31
COL6A1-204ENST00000486023 EURLQ9NYK6 297 aa16.99■□□□□ 0.31
COL6A1-204ENST00000486023 GPN3Q9UHW5 284 aaPredicted RBP16.99■□□□□ 0.31
COL6A1-204ENST00000486023 FBXO5Q9UKT4 447 aa16.99■□□□□ 0.31
COL6A1-204ENST00000486023 FAM169AQ9Y6X4 670 aa16.99■□□□□ 0.31
COL6A1-204ENST00000486023 ARGFXA6NJG6 315 aa16.98■□□□□ 0.31
COL6A1-204ENST00000486023 C9J4A7 227 aa16.98■□□□□ 0.31
COL6A1-204ENST00000486023 J3QKU1 62 aa16.98■□□□□ 0.31
COL6A1-204ENST00000486023 ZSCAN9O15535 394 aaPredicted RBP16.98■□□□□ 0.31
COL6A1-204ENST00000486023 TTI1O43156 1089 aa16.98■□□□□ 0.31
COL6A1-204ENST00000486023 DNAJB5O75953 348 aa16.98■□□□□ 0.31
COL6A1-204ENST00000486023 MSL3P1P0C860 447 aa16.98■□□□□ 0.31
COL6A1-204ENST00000486023 NR1D1P20393 614 aa16.98■□□□□ 0.31
COL6A1-204ENST00000486023 CARSP49589 748 aaKnown RBP16.98■□□□□ 0.31
COL6A1-204ENST00000486023 CLCN7P51798 805 aa16.98■□□□□ 0.31
COL6A1-204ENST00000486023 ADARP55265 1226 aaKnown RBP16.98■□□□□ 0.31
COL6A1-204ENST00000486023 IL10RAQ13651 578 aa16.98■□□□□ 0.31
COL6A1-204ENST00000486023 CRYMQ14894 314 aa16.98■□□□□ 0.31
COL6A1-204ENST00000486023 CRTC2Q53ET0 693 aaPredicted RBP16.98■□□□□ 0.31
COL6A1-204ENST00000486023 FCRL6Q6DN72 434 aa16.98■□□□□ 0.31
COL6A1-204ENST00000486023 SUSD1Q6UWL2 747 aa16.98■□□□□ 0.31
COL6A1-204ENST00000486023 SYVN1Q86TM6 617 aa16.98■□□□□ 0.31
COL6A1-204ENST00000486023 C17orf53Q8N3J3 647 aaPredicted RBP16.98■□□□□ 0.31
COL6A1-204ENST00000486023 LRFN5Q96NI6 719 aa16.98■□□□□ 0.31
COL6A1-204ENST00000486023 KRT12Q99456 494 aa16.98■□□□□ 0.31
COL6A1-204ENST00000486023 NDNQ99608 321 aa16.98■□□□□ 0.31
COL6A1-204ENST00000486023 GPR21Q99679 349 aa16.98■□□□□ 0.31
COL6A1-204ENST00000486023 EBNA1BP2Q99848 306 aaKnown RBP16.98■□□□□ 0.31
COL6A1-204ENST00000486023 FAM167BQ9BTA0 163 aa16.98■□□□□ 0.31
COL6A1-204ENST00000486023 NDC1Q9BTX1 674 aa16.98■□□□□ 0.31
COL6A1-204ENST00000486023 NLNQ9BYT8 704 aa16.98■□□□□ 0.31
COL6A1-204ENST00000486023 AP1M2Q9Y6Q5 423 aa16.98■□□□□ 0.31
COL6A1-204ENST00000486023 ARHGEF33A8MVX0 844 aa16.97■□□□□ 0.31
COL6A1-204ENST00000486023 MATN4O95460 622 aa16.97■□□□□ 0.31
COL6A1-204ENST00000486023 CATP04040 527 aaKnown RBP16.97■□□□□ 0.31
COL6A1-204ENST00000486023 GABRA4P48169 554 aa16.97■□□□□ 0.31
COL6A1-204ENST00000486023 CCL11P51671 97 aa16.97■□□□□ 0.31
COL6A1-204ENST00000486023 UGT8Q16880 541 aa16.97■□□□□ 0.31
COL6A1-204ENST00000486023 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.97■□□□□ 0.31
COL6A1-204ENST00000486023 TLDC1Q6P9B6 456 aa16.97■□□□□ 0.31
COL6A1-204ENST00000486023 IGDCC3Q8IVU1 814 aa16.97■□□□□ 0.31
COL6A1-204ENST00000486023 OR9A1PQ8NGU1 263 aa16.97■□□□□ 0.31
COL6A1-204ENST00000486023 GIMAP7Q8NHV1 300 aa16.97■□□□□ 0.31
COL6A1-204ENST00000486023 DENND1AQ8TEH3 1009 aa16.97■□□□□ 0.31
COL6A1-204ENST00000486023 INPP5DQ92835 1189 aa16.97■□□□□ 0.31
COL6A1-204ENST00000486023 IFT80Q9P2H3 777 aaPredicted RBP16.97■□□□□ 0.31
COL6A1-204ENST00000486023 TLK1Q9UKI8 766 aa16.97■□□□□ 0.31
COL6A1-204ENST00000486023 TCFL5Q9UL49 500 aa16.97■□□□□ 0.31
COL6A1-204ENST00000486023 CHMP2BQ9UQN3 213 aa16.97■□□□□ 0.31
COL6A1-204ENST00000486023 A0A0J9YVX5 310 aa16.96■□□□□ 0.31
COL6A1-204ENST00000486023 MKRN2OSH3BPM6 223 aa16.96■□□□□ 0.31
COL6A1-204ENST00000486023 EIF2S1P05198 315 aaKnown RBP16.96■□□□□ 0.31
COL6A1-204ENST00000486023 RAB40ALP0C0E4 278 aa16.96■□□□□ 0.31
COL6A1-204ENST00000486023 MCM3P25205 808 aa16.96■□□□□ 0.31
COL6A1-204ENST00000486023 OTX2P32243 289 aa16.96■□□□□ 0.31
COL6A1-204ENST00000486023 RPA3P35244 121 aaPredicted RBP16.96■□□□□ 0.31
COL6A1-204ENST00000486023 ITGA8P53708 1063 aa16.96■□□□□ 0.31
COL6A1-204ENST00000486023 FOXL2P58012 376 aa16.96■□□□□ 0.31
COL6A1-204ENST00000486023 YBX1P67809 324 aaKnown RBP16.96■□□□□ 0.31
COL6A1-204ENST00000486023 DCDP81605 110 aaKnown RBP16.96■□□□□ 0.31
COL6A1-204ENST00000486023 SPANXN3Q5MJ09 141 aa16.96■□□□□ 0.31
COL6A1-204ENST00000486023 CPZQ66K79 652 aa16.96■□□□□ 0.31
COL6A1-204ENST00000486023 FAM198BQ6UWH4 519 aa16.96■□□□□ 0.31
COL6A1-204ENST00000486023 ZNF517Q6ZMY9 492 aaPredicted RBP16.96■□□□□ 0.31
COL6A1-204ENST00000486023 TTLL10Q6ZVT0 673 aa16.96■□□□□ 0.31
COL6A1-204ENST00000486023 ANKMY2Q8IV38 441 aa16.96■□□□□ 0.31
COL6A1-204ENST00000486023 CPNE9Q8IYJ1 553 aa16.96■□□□□ 0.31
COL6A1-204ENST00000486023 PDIK1LQ8N165 341 aa16.96■□□□□ 0.31
COL6A1-204ENST00000486023 METTL27Q8N6F8 245 aaPredicted RBP16.96■□□□□ 0.31
COL6A1-204ENST00000486023 PPFIBP2Q8ND30 876 aa16.96■□□□□ 0.31
COL6A1-204ENST00000486023 SEC14L1Q92503 715 aa16.96■□□□□ 0.31
COL6A1-204ENST00000486023 SLCO2A1Q92959 643 aa16.96■□□□□ 0.31
COL6A1-204ENST00000486023 RUNDC3BQ96NL0 473 aa16.96■□□□□ 0.31
COL6A1-204ENST00000486023 PKP4Q99569 1192 aa16.96■□□□□ 0.31
COL6A1-204ENST00000486023 SELENOSQ9BQE4 189 aa16.96■□□□□ 0.31
COL6A1-204ENST00000486023 AARSD1Q9BTE6 412 aaKnown RBP16.96■□□□□ 0.31
COL6A1-204ENST00000486023 TRIM55Q9BYV6 548 aa16.96■□□□□ 0.31
COL6A1-204ENST00000486023 FAM114A2Q9NRY5 505 aa16.96■□□□□ 0.31
COL6A1-204ENST00000486023 SLC17A6Q9P2U8 582 aa16.96■□□□□ 0.31
COL6A1-204ENST00000486023 A6NL46 340 aa16.95■□□□□ 0.3
COL6A1-204ENST00000486023 K7EM74 188 aa16.95■□□□□ 0.3
COL6A1-204ENST00000486023 VPS26AO75436 327 aa16.95■□□□□ 0.3
COL6A1-204ENST00000486023 RFPL1O75677 317 aa16.95■□□□□ 0.3
COL6A1-204ENST00000486023 CAPN1P07384 714 aa16.95■□□□□ 0.3
COL6A1-204ENST00000486023 IVDP26440 423 aa16.95■□□□□ 0.3
COL6A1-204ENST00000486023 ATP5DP30049 168 aa16.95■□□□□ 0.3
COL6A1-204ENST00000486023 ELK3P41970 407 aa16.95■□□□□ 0.3
COL6A1-204ENST00000486023 VSX2P58304 361 aaPredicted RBP16.95■□□□□ 0.3
COL6A1-204ENST00000486023 GBX1Q14549 363 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms