RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 ARHGEF33A8MVX0 844 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 TARM1B6A8C7 271 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 PIAS1O75925 651 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 FAM155BO75949 473 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 C9P02748 559 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 NUDT17P0C025 328 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 MYZAPP0CAP1 466 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 THRAP10827 490 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 OAS2P29728 719 aaKnown RBP8□□□□□ -1.13
SF3A1-208ENST00000485618 PRDX3P30048 256 aaKnown RBP8□□□□□ -1.13
SF3A1-208ENST00000485618 CMPK1P30085 196 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 PKLRP30613 574 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 GRK3P35626 688 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 CCT5P48643 541 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 PNLIPRP1P54315 467 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 CDKL1Q00532 357 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 CAMK2BQ13554 666 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 IL11RAQ14626 422 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 SLC5A12Q1EHB4 618 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 ZC3H12BQ5HYM0 836 aaKnown RBP8□□□□□ -1.13
SF3A1-208ENST00000485618 DCAF12Q5T6F0 453 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 CAPN13Q6MZZ7 669 aaPredicted RBP8□□□□□ -1.13
SF3A1-208ENST00000485618 SPESP1Q6UW49 350 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 TIFABQ6ZNK6 161 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 FAM92BQ6ZTR7 304 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 MICALCLQ6ZW33 695 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 FAM129CQ86XR2 697 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 CEP97Q8IW35 865 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 SLITRK4Q8IW52 837 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 GSPT2Q8IYD1 628 aaKnown RBP8□□□□□ -1.13
SF3A1-208ENST00000485618 GIMAP7Q8NHV1 300 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 RHEBL1Q8TAI7 183 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 DENND1AQ8TEH3 1009 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 DCAKDQ8WVC6 231 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 KIAA1191Q96A73 305 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 UBXN10Q96LJ8 280 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 CCDC74BQ96LY2 380 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 TEFMQ96QE5 360 aaKnown RBP8□□□□□ -1.13
SF3A1-208ENST00000485618 RUFY1Q96T51 708 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 PKP4Q99569 1192 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 SLC30A3Q99726 388 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 EGFL8Q99944 293 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 NUDT22Q9BRQ3 303 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 CHRNA10Q9GZZ6 450 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 VPS11Q9H270 941 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 ZNF768Q9H5H4 540 aaKnown RBP8□□□□□ -1.13
SF3A1-208ENST00000485618 XKR8Q9H6D3 395 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 CAB39LQ9H9S4 337 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 POLR1BQ9H9Y6 1135 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 CCDC177Q9NQR7 707 aaPredicted RBP8□□□□□ -1.13
SF3A1-208ENST00000485618 SNX15Q9NRS6 342 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 THSD1Q9NS62 852 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 SOHLH2Q9NX45 425 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 KLHL3Q9UH77 587 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 DCDC2Q9UHG0 476 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 SERTAD3Q9UJW9 196 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 POMT2Q9UKY4 750 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 RNF112Q9ULX5 631 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 SNX7Q9UNH6 387 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 ICKQ9UPZ9 632 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 RUVBL2Q9Y230 463 aaKnown RBP8□□□□□ -1.13
SF3A1-208ENST00000485618 MED16Q9Y2X0 877 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 PCDHGA8Q9Y5G5 932 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 NFS1Q9Y697 457 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 LOC400499M0QZD8 3231 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 DSPP15924 2871 aaKnown RBP7.99□□□□□ -1.13
SF3A1-208ENST00000485618 PRAMEF33A0A0G2JMD5 474 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 TLDC2A0PJX2 215 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 A8MU76 341 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 B4E171 279 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 TRIM49D1C9J1S8 452 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 PLD2O14939 933 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 POLR1CO15160 346 aaPredicted RBP7.99□□□□□ -1.13
SF3A1-208ENST00000485618 PHGDHO43175 533 aaKnown RBP7.99□□□□□ -1.13
SF3A1-208ENST00000485618 H2AFYO75367 372 aaKnown RBP7.99□□□□□ -1.13
SF3A1-208ENST00000485618 IPO13O94829 963 aaKnown RBP7.99□□□□□ -1.13
SF3A1-208ENST00000485618 KLHL2O95198 593 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 TSPAN12O95859 305 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 SLC16A8O95907 504 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 C1QAP02745 245 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 C2P06681 752 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 GSTA1P08263 222 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 TPBGLP0DKB5 382 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 MYBL2P10244 700 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 CD82P27701 267 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 TSPAN7P41732 249 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 BDKRB1P46663 353 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 CLDN6P56747 220 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 TIAL1Q01085 375 aaKnown RBP eCLIP7.99□□□□□ -1.13
SF3A1-208ENST00000485618 TSTA3Q13630 321 aaPredicted RBP7.99□□□□□ -1.13
SF3A1-208ENST00000485618 BMPR2Q13873 1038 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 CSHL1Q14406 222 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 EFTUD2Q15029 972 aaKnown RBP eCLIP7.99□□□□□ -1.134e-7■■■□□ 19.2
SF3A1-208ENST00000485618 SULT1C3Q6IMI6 304 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 XKR5Q6UX68 686 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 CEACAM20Q6UY09 585 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 ARHGAP22Q7Z5H3 698 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 ADGRF3Q8IZF5 1079 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 LMNTD1Q8N9Z9 388 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 KLHL6Q8WZ60 621 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms