RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 KLK4Q9Y5K2 254 aa12.49□□□□□ -0.41
HDAC6-227ENST00000485102 A0A1B0GUH1 482 aa12.48□□□□□ -0.41
HDAC6-227ENST00000485102 HEATR9A2RTY3 570 aa12.48□□□□□ -0.41
HDAC6-227ENST00000485102 TARM1B6A8C7 271 aa12.48□□□□□ -0.41
HDAC6-227ENST00000485102 PSMD3O43242 534 aa12.48□□□□□ -0.41
HDAC6-227ENST00000485102 SRPX2O60687 465 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-227ENST00000485102 GPC4O75487 556 aa12.48□□□□□ -0.41
HDAC6-227ENST00000485102 TPH1P17752 444 aa12.48□□□□□ -0.41
HDAC6-227ENST00000485102 MAGP20916 626 aa12.48□□□□□ -0.41
HDAC6-227ENST00000485102 CD9P21926 228 aa12.48□□□□□ -0.41
HDAC6-227ENST00000485102 CTNNA2P26232 953 aa12.48□□□□□ -0.41
HDAC6-227ENST00000485102 CETN2P41208 172 aa12.48□□□□□ -0.41
HDAC6-227ENST00000485102 GRM7Q14831 915 aa12.48□□□□□ -0.41
HDAC6-227ENST00000485102 FAM214AQ32MH5 1076 aa12.48□□□□□ -0.41
HDAC6-227ENST00000485102 IRAK1BP1Q5VVH5 260 aa12.48□□□□□ -0.41
HDAC6-227ENST00000485102 ZNF324BQ6AW86 544 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-227ENST00000485102 ISLR2Q6UXK2 745 aa12.48□□□□□ -0.41
HDAC6-227ENST00000485102 COX15Q7KZN9 410 aa12.48□□□□□ -0.41
HDAC6-227ENST00000485102 LINC01555Q8NAE3 123 aa12.48□□□□□ -0.41
HDAC6-227ENST00000485102 OR11G2Q8NGC1 345 aa12.48□□□□□ -0.41
HDAC6-227ENST00000485102 RELTQ969Z4 430 aa12.48□□□□□ -0.41
HDAC6-227ENST00000485102 TRIM44Q96DX7 344 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-227ENST00000485102 ALS2CR12Q96Q35 445 aa12.48□□□□□ -0.41
HDAC6-227ENST00000485102 EPS8L2Q9H6S3 715 aa12.48□□□□□ -0.41
HDAC6-227ENST00000485102 INTS7Q9NVH2 962 aaKnown RBP12.48□□□□□ -0.41
HDAC6-227ENST00000485102 CDC23Q9UJX2 597 aa12.48□□□□□ -0.41
HDAC6-227ENST00000485102 RIMKLBQ9ULI2 386 aa12.48□□□□□ -0.41
HDAC6-227ENST00000485102 OSGIN2Q9Y236 505 aa12.48□□□□□ -0.41
HDAC6-227ENST00000485102 C2CD3Q4AC94 2353 aa12.48□□□□□ -0.41
HDAC6-227ENST00000485102 ANKRD17O75179 2603 aaKnown RBP12.47□□□□□ -0.41
HDAC6-227ENST00000485102 F8P00451 2351 aa12.47□□□□□ -0.41
HDAC6-227ENST00000485102 CCDC78A2IDD5 438 aa12.47□□□□□ -0.41
HDAC6-227ENST00000485102 PRICKLE3O43900 615 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-227ENST00000485102 METTL18O95568 372 aa12.47□□□□□ -0.41
HDAC6-227ENST00000485102 RPN2P04844 631 aa12.47□□□□□ -0.41
HDAC6-227ENST00000485102 CARSP49589 748 aaKnown RBP12.47□□□□□ -0.41
HDAC6-227ENST00000485102 RWDD2BP57060 319 aa12.47□□□□□ -0.41
HDAC6-227ENST00000485102 CDC16Q13042 620 aa12.47□□□□□ -0.41
HDAC6-227ENST00000485102 GRB7Q14451 532 aa12.47□□□□□ -0.41
HDAC6-227ENST00000485102 POU6F1Q14863 301 aa12.47□□□□□ -0.41
HDAC6-227ENST00000485102 P3H1Q32P28 736 aa12.47□□□□□ -0.41
HDAC6-227ENST00000485102 TUBB8Q3ZCM7 444 aa12.47□□□□□ -0.41
HDAC6-227ENST00000485102 SP5Q6BEB4 398 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-227ENST00000485102 FIGLAQ6QHK4 219 aa12.47□□□□□ -0.41
HDAC6-227ENST00000485102 UNC5DQ6UXZ4 953 aa12.47□□□□□ -0.41
HDAC6-227ENST00000485102 RAD9BQ6WBX8 426 aa12.47□□□□□ -0.41
HDAC6-227ENST00000485102 OR2L8Q8NGY9 312 aa12.47□□□□□ -0.41
HDAC6-227ENST00000485102 ASZ1Q8WWH4 475 aa12.47□□□□□ -0.41
HDAC6-227ENST00000485102 MARVELD3Q96A59 401 aa12.47□□□□□ -0.41
HDAC6-227ENST00000485102 TTC1Q99614 292 aa12.47□□□□□ -0.41
HDAC6-227ENST00000485102 CARD6Q9BX69 1037 aa12.47□□□□□ -0.41
HDAC6-227ENST00000485102 CUTCQ9NTM9 273 aa12.47□□□□□ -0.41
HDAC6-227ENST00000485102 IRAK4Q9NWZ3 460 aa12.47□□□□□ -0.41
HDAC6-227ENST00000485102 A0A1W2PQ72 361 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 MACROD2A1Z1Q3 448 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 CCDC162PA2VCL2 907 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 ERI2A8K979 691 aaKnown RBP12.46□□□□□ -0.41
HDAC6-227ENST00000485102 ZG16O60844 167 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 SLCO2B1O94956 709 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 PRF1P14222 555 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 CCR7P32248 378 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 ACVR1Q04771 509 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 Q0VFX4 171 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 MFAP5Q13361 173 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 ART3Q13508 389 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 BRD3Q15059 726 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 SYTL3Q4VX76 610 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 ATG9BQ674R7 924 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 ARHGEF18Q6ZSZ5 1173 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 MICALCLQ6ZW33 695 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 LINC00523Q86TU6 105 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 DCUN1D3Q8IWE4 304 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 FAM20CQ8IXL6 584 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 PARP9Q8IXQ6 854 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 SRRM1Q8IYB3 904 aaKnown RBP12.46□□□□□ -0.41
HDAC6-227ENST00000485102 BCORP1Q8N888 145 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 LMNTD1Q8N9Z9 388 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 PEX13Q92968 403 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 RUBCNLQ9H714 662 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 PLAGL1Q9UM63 463 aa12.46□□□□□ -0.41
HDAC6-227ENST00000485102 OTOGQ6ZRI0 2925 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 IGLV3-12A0A075B6K2 115 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 OR1I1O60431 355 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 KLHL18O94889 574 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 HPP00738 406 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 FDXRP22570 491 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 PPARGP37231 505 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-227ENST00000485102 EMP3P54852 163 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 CCZ1BP86790 482 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 CCZ1P86791 482 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-227ENST00000485102 INAQ16352 499 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 RBBP7Q16576 425 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 PRMT9Q6P2P2 845 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 FAM180AQ6UWF9 173 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 NAPRTQ6XQN6 538 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 FAM71DQ8N9W8 422 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 TTC29Q8NA56 475 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-227ENST00000485102 TRIM58Q8NG06 486 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 OR13J1Q8NGT2 312 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 HMGCLL1Q8TB92 370 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms