RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 PIAS1O75925 651 aa17.15■□□□□ 0.34
SREBF1-213ENST00000485080 EBLN1P0CF75 366 aa17.15■□□□□ 0.34
SREBF1-213ENST00000485080 OAS2P29728 719 aaKnown RBP17.15■□□□□ 0.34
SREBF1-213ENST00000485080 PHBP35232 272 aa17.15■□□□□ 0.34
SREBF1-213ENST00000485080 SPRP35270 261 aaPredicted RBP17.15■□□□□ 0.34
SREBF1-213ENST00000485080 TLE3Q04726 772 aa17.15■□□□□ 0.34
SREBF1-213ENST00000485080 FOXM1Q08050 763 aa17.15■□□□□ 0.34
SREBF1-213ENST00000485080 TUBB3Q13509 450 aa17.15■□□□□ 0.34
SREBF1-213ENST00000485080 SLMAPQ14BN4 828 aa17.15■□□□□ 0.34
SREBF1-213ENST00000485080 FBXO38Q6PIJ6 1188 aa17.15■□□□□ 0.34
SREBF1-213ENST00000485080 TMEM207Q6UWW9 146 aa17.15■□□□□ 0.34
SREBF1-213ENST00000485080 UBE2R2Q712K3 238 aaPredicted RBP17.15■□□□□ 0.34
SREBF1-213ENST00000485080 PPP1R3BQ86XI6 285 aa17.15■□□□□ 0.34
SREBF1-213ENST00000485080 NKAPQ8N5F7 415 aaKnown RBP17.15■□□□□ 0.34
SREBF1-213ENST00000485080 C19orf47Q8N9M1 422 aaKnown RBP17.15■□□□□ 0.34
SREBF1-213ENST00000485080 MCOLN3Q8TDD5 553 aa17.15■□□□□ 0.34
SREBF1-213ENST00000485080 SMPDL3AQ92484 453 aa17.15■□□□□ 0.34
SREBF1-213ENST00000485080 ZUFSPQ96AP4 578 aa17.15■□□□□ 0.34
SREBF1-213ENST00000485080 ZNF501Q96CX3 271 aaPredicted RBP17.15■□□□□ 0.34
SREBF1-213ENST00000485080 TSPAN17Q96FV3 270 aa17.15■□□□□ 0.34
SREBF1-213ENST00000485080 CYTH2Q99418 400 aa17.15■□□□□ 0.34
SREBF1-213ENST00000485080 ACSS3Q9H6R3 686 aa17.15■□□□□ 0.34
SREBF1-213ENST00000485080 ENAMQ9NRM1 1142 aa17.15■□□□□ 0.34
SREBF1-213ENST00000485080 RARRES3Q9UL19 164 aa17.15■□□□□ 0.34
SREBF1-213ENST00000485080 ESPNB1AK53 854 aa17.14■□□□□ 0.33
SREBF1-213ENST00000485080 TARM1B6A8C7 271 aa17.14■□□□□ 0.33
SREBF1-213ENST00000485080 DLGAP3O95886 979 aa17.14■□□□□ 0.33
SREBF1-213ENST00000485080 SLC16A8O95907 504 aa17.14■□□□□ 0.33
SREBF1-213ENST00000485080 CYP2A7P20853 494 aa17.14■□□□□ 0.33
SREBF1-213ENST00000485080 PNLIPRP1P54315 467 aa17.14■□□□□ 0.33
SREBF1-213ENST00000485080 KCNAB1Q14722 419 aa17.14■□□□□ 0.33
SREBF1-213ENST00000485080 ZKSCAN8Q15776 578 aaPredicted RBP17.14■□□□□ 0.33
SREBF1-213ENST00000485080 ZFAND4Q86XD8 727 aa17.14■□□□□ 0.33
SREBF1-213ENST00000485080 SPNS2Q8IVW8 549 aa17.14■□□□□ 0.33
SREBF1-213ENST00000485080 CTAGE3PQ8IX95 158 aa17.14■□□□□ 0.33
SREBF1-213ENST00000485080 LRRC56Q8IYG6 542 aaPredicted RBP17.14■□□□□ 0.33
SREBF1-213ENST00000485080 PPM1NQ8N819 430 aa17.14■□□□□ 0.33
SREBF1-213ENST00000485080 LRRN4CLQ8ND94 238 aa17.14■□□□□ 0.33
SREBF1-213ENST00000485080 OR2A1Q8NGT9 310 aa17.14■□□□□ 0.33
SREBF1-213ENST00000485080 ZNF480Q8WV37 535 aa17.14■□□□□ 0.33
SREBF1-213ENST00000485080 CCDC138Q96M89 665 aa17.14■□□□□ 0.33
SREBF1-213ENST00000485080 CTRCQ99895 268 aa17.14■□□□□ 0.33
SREBF1-213ENST00000485080 CDC42EP4Q9H3Q1 356 aaKnown RBP17.14■□□□□ 0.33
SREBF1-213ENST00000485080 INTS7Q9NVH2 962 aaKnown RBP17.14■□□□□ 0.33
SREBF1-213ENST00000485080 SOHLH2Q9NX45 425 aa17.14■□□□□ 0.33
SREBF1-213ENST00000485080 CIDEBQ9UHD4 219 aa17.14■□□□□ 0.33
SREBF1-213ENST00000485080 TSR3Q9UJK0 312 aaKnown RBP17.14■□□□□ 0.33
SREBF1-213ENST00000485080 NFU1Q9UMS0 254 aa17.14■□□□□ 0.33
SREBF1-213ENST00000485080 NOVA2Q9UNW9 492 aaKnown RBP17.14■□□□□ 0.33
SREBF1-213ENST00000485080 PDE10AQ9Y233 779 aa17.14■□□□□ 0.33
SREBF1-213ENST00000485080 MTO1Q9Y2Z2 717 aaKnown RBP17.14■□□□□ 0.33
SREBF1-213ENST00000485080 ANKRD12Q6UB98 2062 aa17.14■□□□□ 0.33
SREBF1-213ENST00000485080 FAM208BQ5VWN6 2430 aa17.13■□□□□ 0.33
SREBF1-213ENST00000485080 KRT87PA6NCN2 255 aa17.13■□□□□ 0.33
SREBF1-213ENST00000485080 E7ENX8 843 aa17.13■□□□□ 0.33
SREBF1-213ENST00000485080 STK17BO94768 372 aa17.13■□□□□ 0.33
SREBF1-213ENST00000485080 ENO2P09104 434 aaPredicted RBP17.13■□□□□ 0.33
SREBF1-213ENST00000485080 RHOXF2BP0C7M4 288 aa17.13■□□□□ 0.33
SREBF1-213ENST00000485080 PVRP15151 417 aa17.13■□□□□ 0.33
SREBF1-213ENST00000485080 GABRA4P48169 554 aa17.13■□□□□ 0.33
SREBF1-213ENST00000485080 UCNP55089 124 aa17.13■□□□□ 0.33
SREBF1-213ENST00000485080 AP1S2P56377 157 aa17.13■□□□□ 0.33
SREBF1-213ENST00000485080 TAP2Q03519 686 aa17.13■□□□□ 0.33
SREBF1-213ENST00000485080 NAA25Q14CX7 972 aa17.13■□□□□ 0.33
SREBF1-213ENST00000485080 SF1Q15637 639 aaKnown RBP17.13■□□□□ 0.33
SREBF1-213ENST00000485080 ZIC1Q15915 447 aa17.13■□□□□ 0.33
SREBF1-213ENST00000485080 TRIM73Q86UV7 250 aa17.13■□□□□ 0.33
SREBF1-213ENST00000485080 CEP97Q8IW35 865 aa17.13■□□□□ 0.33
SREBF1-213ENST00000485080 NKD1Q969G9 470 aa17.13■□□□□ 0.33
SREBF1-213ENST00000485080 DCBLD2Q96PD2 775 aa17.13■□□□□ 0.33
SREBF1-213ENST00000485080 RHOXF2Q9BQY4 288 aa17.13■□□□□ 0.33
SREBF1-213ENST00000485080 FANCEQ9HB96 536 aa17.13■□□□□ 0.33
SREBF1-213ENST00000485080 ADAMTS6Q9UKP5 1117 aa17.13■□□□□ 0.33
SREBF1-213ENST00000485080 NBEAQ8NFP9 2946 aa17.13■□□□□ 0.33
SREBF1-213ENST00000485080 CACNA1GO43497 2377 aa17.13■□□□□ 0.33
SREBF1-213ENST00000485080 KLK10O43240 276 aa17.12■□□□□ 0.33
SREBF1-213ENST00000485080 IMPA1P29218 277 aa17.12■□□□□ 0.33
SREBF1-213ENST00000485080 SLC12A2P55011 1212 aa17.12■□□□□ 0.33
SREBF1-213ENST00000485080 FASTKQ14296 549 aaKnown RBP17.12■□□□□ 0.33
SREBF1-213ENST00000485080 USP10Q14694 798 aaKnown RBP17.12■□□□□ 0.33
SREBF1-213ENST00000485080 CDHR3Q6ZTQ4 885 aa17.12■□□□□ 0.33
SREBF1-213ENST00000485080 DNAJC22Q8N4W6 341 aa17.12■□□□□ 0.33
SREBF1-213ENST00000485080 C2orf73Q8N5S3 287 aaPredicted RBP17.12■□□□□ 0.33
SREBF1-213ENST00000485080 OR2L3Q8NG85 312 aa17.12■□□□□ 0.33
SREBF1-213ENST00000485080 SNRNP27Q8WVK2 155 aaKnown RBP17.12■□□□□ 0.33
SREBF1-213ENST00000485080 DERL2Q9GZP9 239 aa17.12■□□□□ 0.33
SREBF1-213ENST00000485080 FAM60AQ9NP50 221 aa17.12■□□□□ 0.33
SREBF1-213ENST00000485080 PCDHB3Q9Y5E6 796 aa17.12■□□□□ 0.33
SREBF1-213ENST00000485080 HEATR5BQ9P2D3 2071 aa17.12■□□□□ 0.33
SREBF1-213ENST00000485080 H3BMH7 237 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 RAD1O60671 282 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 MT-ND3P03897 115 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 ABHD2P08910 425 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 HIST1H2AGP0C0S8 130 aaPredicted RBP17.11■□□□□ 0.33
SREBF1-213ENST00000485080 STMN1P16949 149 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 HIST1H2ADP20671 130 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 ITPKBP27987 946 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 TNFRSF8P28908 595 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 GRIA3P42263 894 aa17.11■□□□□ 0.33
SREBF1-213ENST00000485080 ATP1A2P50993 1020 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms