RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 FITM1A5D6W6 292 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 KRT87PA6NCN2 255 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 CCL21O00585 134 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 OR1I1O60431 355 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 UNC5CO95185 931 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 ZRANB2O95218 330 aaKnown RBP eCLIP12.31□□□□□ -0.44
UBR4-213ENST00000483922 HPP00738 406 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 CCR7P32248 378 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 PTGER4P35408 488 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 CA7P43166 264 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 KIR3DL1P43629 444 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 RBBP7Q16576 425 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 FIGLAQ6QHK4 219 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 BBS12Q6ZW61 710 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 GDF7Q7Z4P5 450 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 CCDC50Q8IVM0 306 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 PRSS58Q8IYP2 241 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 OR4N4Q8N0Y3 316 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 SHISA5Q8N114 240 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 OR8K1Q8NGG5 319 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 STT3BQ8TCJ2 826 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 BRIX1Q8TDN6 353 aaKnown RBP12.31□□□□□ -0.44
UBR4-213ENST00000483922 ADAMTS18Q8TE60 1221 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 DLG3Q92796 817 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 IQCDQ96DY2 449 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 MAGEB10Q96LZ2 347 aaPredicted RBP12.31□□□□□ -0.44
UBR4-213ENST00000483922 TBL1YQ9BQ87 522 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 NHEJ1Q9H9Q4 299 aaPredicted RBP12.31□□□□□ -0.44
UBR4-213ENST00000483922 MRM3Q9HC36 420 aaKnown RBP12.31□□□□□ -0.44
UBR4-213ENST00000483922 PIH1D1Q9NWS0 290 aaKnown RBP12.31□□□□□ -0.44
UBR4-213ENST00000483922 AAR2Q9Y312 384 aaKnown RBP12.31□□□□□ -0.44
UBR4-213ENST00000483922 TRGV8A0A0C4DH27 118 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 H7C0C1 242 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 APOC4-APOC2K7ER74 178 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 PSTPIP1O43586 416 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 SPOPO43791 374 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 AKR1B10O60218 316 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 AP2A2O94973 939 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 METTL18O95568 372 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 MBD3O95983 291 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 APOC2P02655 101 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 GSTM1P09488 218 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 ZGLP1P0C6A0 271 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 PRR35P0CG20 571 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 COX6A1P12074 109 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 CD9P21926 228 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 ATP5OP48047 213 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 CSE1LP55060 971 aaKnown RBP12.3□□□□□ -0.44
UBR4-213ENST00000483922 SNRPNP63162 240 aaKnown RBP12.3□□□□□ -0.44
UBR4-213ENST00000483922 GSTM4Q03013 218 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 CACNG1Q06432 222 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 ODF2Q5BJF6 829 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 WASHC2DQ5SRD0 308 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 ARHGEF18Q6ZSZ5 1173 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 TAX1BP1Q86VP1 789 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 RCOR2Q8IZ40 523 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 ZNF808Q8N4W9 903 aaPredicted RBP12.3□□□□□ -0.44
UBR4-213ENST00000483922 SIRT6Q8N6T7 355 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 ACTL9Q8TC94 416 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 LKAAEAR1Q8TD35 194 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 GBP4Q96PP9 640 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 CRB3Q9BUF7 120 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 RUBCNLQ9H714 662 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 VPS37BQ9H9H4 285 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 IMPACTQ9P2X3 320 aa12.3□□□□□ -0.44
UBR4-213ENST00000483922 NIPBLQ6KC79 2804 aaeCLIP12.29□□□□□ -0.446e-7■■□□□ 12.1
UBR4-213ENST00000483922 MED13LQ71F56 2210 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 IGLV3-12A0A075B6K2 115 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 HYKKA2RU49 373 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 CCDC162PA2VCL2 907 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 FFAR3O14843 346 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 GPR42O15529 346 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 GPC4O75487 556 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 WDPCPO95876 746 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 PIM1P11309 404 aaPredicted RBP12.29□□□□□ -0.44
UBR4-213ENST00000483922 FOXN2P32314 431 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 NSG1P42857 185 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 RAB28P51157 221 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 VSX2P58304 361 aaPredicted RBP12.29□□□□□ -0.44
UBR4-213ENST00000483922 ARG2P78540 354 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 PMP22Q01453 160 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 GRM7Q14831 915 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 CCSMST1Q4G0I0 132 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 ITPRIPL1Q6GPH6 555 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 CAVIN1Q6NZI2 390 aaKnown RBP12.29□□□□□ -0.44
UBR4-213ENST00000483922 AADACL2Q6P093 401 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 FBXO42Q6P3S6 717 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 ZNF449Q6P9G9 518 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 TMEM207Q6UWW9 146 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 PACS1Q6VY07 963 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 NCCRP1Q6ZVX7 275 aaPredicted RBP12.29□□□□□ -0.44
UBR4-213ENST00000483922 KBTBD2Q8IY47 623 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 SPATA13Q96N96 652 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 ZNF304Q9HCX3 659 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 SH3BGRL2Q9UJC5 107 aa12.29□□□□□ -0.44
UBR4-213ENST00000483922 A0A1W2PQ72 361 aa12.28□□□□□ -0.44
UBR4-213ENST00000483922 MROH6A6NGR9 719 aa12.28□□□□□ -0.44
UBR4-213ENST00000483922 IQCF5A8MTL0 148 aa12.28□□□□□ -0.44
UBR4-213ENST00000483922 KCNN4O15554 427 aa12.28□□□□□ -0.44
UBR4-213ENST00000483922 ZNHIT1O43257 154 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms