RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 VPS4AQ9UN37 437 aa8.7□□□□□ -1.02
HLA-B-253ENST00000481849 ICKQ9UPZ9 632 aa8.7□□□□□ -1.02
HLA-B-253ENST00000481849 EFR3BQ9Y2G0 817 aa8.7□□□□□ -1.02
HLA-B-253ENST00000481849 R3HDM2Q9Y2K5 976 aaKnown RBP8.7□□□□□ -1.02
HLA-B-253ENST00000481849 TDRKHQ9Y2W6 561 aaKnown RBP8.7□□□□□ -1.02
HLA-B-253ENST00000481849 NOTCH1P46531 2555 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 IGLV3-16A0A075B6K0 115 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 A0A0U1RQJ8 604 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 TCRBV7S2A1N4TA0A589 114 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 CLEC18AA5D8T8 446 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 GOLGA6L9A6NEM1 432 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 ZNF749O43361 778 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 FTCDO95954 541 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 CTSBP07858 339 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 CBSLP0DN79 551 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 UGT2B7P16662 529 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 MSNP26038 577 aaKnown RBP8.69□□□□□ -1.02
HLA-B-253ENST00000481849 OTX2P32243 289 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 RORAP35398 523 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 CBSP35520 551 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 CD97P48960 835 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 ZNF75DP51815 510 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 FOXL2P58012 376 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 CACNG1Q06432 222 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 ATP1A4Q13733 1029 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 SLC9A5Q14940 896 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 KYNUQ16719 465 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 PARP6Q2NL67 630 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 ZNF658BQ4V348 819 aaPredicted RBP8.69□□□□□ -1.02
HLA-B-253ENST00000481849 SYTL3Q4VX76 610 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 ZNF789Q5FWF6 425 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 MLIPQ5VWP3 458 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 KCTD11Q693B1 232 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 SPESP1Q6UW49 350 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 FAM198BQ6UWH4 519 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 CLEC18BQ6UXF7 455 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 ZNF517Q6ZMY9 492 aaPredicted RBP8.69□□□□□ -1.02
HLA-B-253ENST00000481849 UNC5AQ6ZN44 842 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 PEX26Q7Z412 305 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 TMTC1Q8IUR5 882 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 FAM20CQ8IXL6 584 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 ADGRF3Q8IZF5 1079 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 ZBTB2Q8N680 514 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 LRRC57Q8N9N7 239 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 CLEC18CQ8NCF0 446 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 FDCSPQ8NFU4 85 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 ADAMTS17Q8TE56 1095 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 ELMO1Q92556 727 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 CDKN2AIPNLQ96HQ2 116 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 LRFN5Q96NI6 719 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 PPP1R2P1Q96PQ5 205 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 PANX2Q96RD6 677 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 TMEM121Q9BTD3 319 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 NUDT9Q9BW91 350 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 NLNQ9BYT8 704 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 SPRTNQ9H040 489 aaPredicted RBP8.69□□□□□ -1.02
HLA-B-253ENST00000481849 TFB2MQ9H5Q4 396 aaKnown RBP8.69□□□□□ -1.02
HLA-B-253ENST00000481849 LRRC40Q9H9A6 602 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 ARNT2Q9HBZ2 717 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 FAM60AQ9NP50 221 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 IRAK4Q9NWZ3 460 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 SPHK1Q9NYA1 384 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 IMPACTQ9P2X3 320 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 STOML1Q9UBI4 398 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 CIDEBQ9UHD4 219 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 FEZ2Q9UHY8 353 aaPredicted RBP8.69□□□□□ -1.02
HLA-B-253ENST00000481849 AMFRQ9UKV5 643 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 ASF1AQ9Y294 204 aa8.69□□□□□ -1.02
HLA-B-253ENST00000481849 TRBV5-4A0A0C4DH59 114 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 CCDC162PA2VCL2 907 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 ISM1B1AKI9 464 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 C9J4A7 227 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 MASP2O00187 686 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 HCRTR1O43613 425 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 OR2B3O76000 313 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 AGFG2O95081 481 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 CAPN1P07384 714 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 RAB40ALP0C0E4 278 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 AGXTP21549 392 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 CD151P48509 253 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 VAV2P52735 878 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 RPA4Q13156 261 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 NCF4Q15080 339 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 ZIC1Q15915 447 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 P3H1Q32P28 736 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 CAPN12Q6ZSI9 719 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.68□□□□□ -1.02
HLA-B-253ENST00000481849 GPR135Q8IZ08 494 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 C2orf73Q8N5S3 287 aaPredicted RBP8.68□□□□□ -1.02
HLA-B-253ENST00000481849 UBL4BQ8N7F7 174 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 C19orf47Q8N9M1 422 aaKnown RBP8.68□□□□□ -1.02
HLA-B-253ENST00000481849 DNAAF3Q8N9W5 541 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 LMNTD1Q8N9Z9 388 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 GALNT11Q8NCW6 608 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 OR52K1Q8NGK4 314 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 STYXQ8WUJ0 223 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 ATG4AQ8WYN0 398 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 OR2A14Q96R47 310 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 DESI2Q9BSY9 194 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 PITPNM3Q9BZ71 974 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms