RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 OTOAQ7RTW8 1153 aa17.82■□□□□ 0.44
CLK1-211ENST00000481641 LRRC8AQ8IWT6 810 aa17.82■□□□□ 0.44
CLK1-211ENST00000481641 MPP5Q8N3R9 675 aa17.82■□□□□ 0.44
CLK1-211ENST00000481641 DTWD1Q8N5C7 304 aa17.82■□□□□ 0.44
CLK1-211ENST00000481641 RBMXL3Q8N7X1 1067 aaKnown RBP17.82■□□□□ 0.44
CLK1-211ENST00000481641 GSDMBQ8TAX9 411 aa17.82■□□□□ 0.44
CLK1-211ENST00000481641 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.82■□□□□ 0.44
CLK1-211ENST00000481641 SLC22A18Q96BI1 424 aa17.82■□□□□ 0.44
CLK1-211ENST00000481641 BIRC8Q96P09 236 aa17.82■□□□□ 0.44
CLK1-211ENST00000481641 C17orf62Q9BQA9 187 aa17.82■□□□□ 0.44
CLK1-211ENST00000481641 GPR83Q9NYM4 423 aa17.82■□□□□ 0.44
CLK1-211ENST00000481641 IL1RAPL1Q9NZN1 696 aa17.82■□□□□ 0.44
CLK1-211ENST00000481641 GALPQ9UBC7 116 aa17.82■□□□□ 0.44
CLK1-211ENST00000481641 PRRC2CQ9Y520 2896 aaKnown RBP17.82■□□□□ 0.44
CLK1-211ENST00000481641 NRP2O60462 931 aa17.81■□□□□ 0.44
CLK1-211ENST00000481641 UMODP07911 640 aa17.81■□□□□ 0.44
CLK1-211ENST00000481641 TPSB2P20231 275 aa17.81■□□□□ 0.44
CLK1-211ENST00000481641 CCZ1BP86790 482 aa17.81■□□□□ 0.44
CLK1-211ENST00000481641 CCZ1P86791 482 aaPredicted RBP17.81■□□□□ 0.44
CLK1-211ENST00000481641 TPSAB1Q15661 275 aa17.81■□□□□ 0.44
CLK1-211ENST00000481641 ANKRD22Q5VYY1 191 aa17.81■□□□□ 0.44
CLK1-211ENST00000481641 JMJD6Q6NYC1 403 aaPredicted RBP17.81■□□□□ 0.44
CLK1-211ENST00000481641 TTC23LQ6PF05 361 aa17.81■□□□□ 0.44
CLK1-211ENST00000481641 PPP1R32Q7Z5V6 425 aa17.81■□□□□ 0.44
CLK1-211ENST00000481641 LRRC6Q86X45 466 aa17.81■□□□□ 0.44
CLK1-211ENST00000481641 FAM26EQ8N5C1 309 aa17.81■□□□□ 0.44
CLK1-211ENST00000481641 EFCAB3Q8N7B9 438 aa17.81■□□□□ 0.44
CLK1-211ENST00000481641 Q8NA96 180 aa17.81■□□□□ 0.44
CLK1-211ENST00000481641 TRIM58Q8NG06 486 aa17.81■□□□□ 0.44
CLK1-211ENST00000481641 OR2Y1Q8NGV0 311 aa17.81■□□□□ 0.44
CLK1-211ENST00000481641 DENND1AQ8TEH3 1009 aa17.81■□□□□ 0.44
CLK1-211ENST00000481641 LPGAT1Q92604 370 aa17.81■□□□□ 0.44
CLK1-211ENST00000481641 COL26A1Q96A83 441 aa17.81■□□□□ 0.44
CLK1-211ENST00000481641 RAD51AP1Q96B01 352 aa17.81■□□□□ 0.44
CLK1-211ENST00000481641 MIPEPQ99797 713 aa17.81■□□□□ 0.44
CLK1-211ENST00000481641 MRM3Q9HC36 420 aaKnown RBP17.81■□□□□ 0.44
CLK1-211ENST00000481641 P4HTMQ9NXG6 502 aa17.81■□□□□ 0.44
CLK1-211ENST00000481641 SOX13Q9UN79 622 aa17.81■□□□□ 0.44
CLK1-211ENST00000481641 CRYL1Q9Y2S2 319 aa17.81■□□□□ 0.44
CLK1-211ENST00000481641 MAP4K5Q9Y4K4 846 aa17.81■□□□□ 0.44
CLK1-211ENST00000481641 PCDHGB7Q9Y5F8 929 aa17.81■□□□□ 0.44
CLK1-211ENST00000481641 AP3B1O00203 1094 aa17.8■□□□□ 0.44
CLK1-211ENST00000481641 DPM1O60762 260 aa17.8■□□□□ 0.44
CLK1-211ENST00000481641 CTSVO60911 334 aa17.8■□□□□ 0.44
CLK1-211ENST00000481641 VPS4BO75351 444 aa17.8■□□□□ 0.44
CLK1-211ENST00000481641 YBX1P67809 324 aaKnown RBP17.8■□□□□ 0.44
CLK1-211ENST00000481641 GPS1Q13098 491 aa17.8■□□□□ 0.44
CLK1-211ENST00000481641 FASTKQ14296 549 aaKnown RBP17.8■□□□□ 0.44
CLK1-211ENST00000481641 KCNJ11Q14654 390 aa17.8■□□□□ 0.44
CLK1-211ENST00000481641 DCAF10Q5QP82 559 aa17.8■□□□□ 0.44
CLK1-211ENST00000481641 TTC27Q6P3X3 843 aa17.8■□□□□ 0.44
CLK1-211ENST00000481641 SDCCAG8Q86SQ7 713 aaPredicted RBP17.8■□□□□ 0.44
CLK1-211ENST00000481641 METTL27Q8N6F8 245 aaPredicted RBP17.8■□□□□ 0.44
CLK1-211ENST00000481641 PTERQ96BW5 349 aa17.8■□□□□ 0.44
CLK1-211ENST00000481641 SMAD5Q99717 465 aaKnown RBP17.8■□□□□ 0.44
CLK1-211ENST00000481641 INTS7Q9NVH2 962 aaKnown RBP17.8■□□□□ 0.44
CLK1-211ENST00000481641 VPS4AQ9UN37 437 aa17.8■□□□□ 0.44
CLK1-211ENST00000481641 G3BP2Q9UN86 482 aaKnown RBP17.8■□□□□ 0.44
CLK1-211ENST00000481641 PEX12O00623 359 aa17.79■□□□□ 0.44
CLK1-211ENST00000481641 ALOX12BO75342 701 aa17.79■□□□□ 0.44
CLK1-211ENST00000481641 KRT14P02533 472 aa17.79■□□□□ 0.44
CLK1-211ENST00000481641 CDK16Q00536 496 aa17.79■□□□□ 0.44
CLK1-211ENST00000481641 INPP5JQ15735 1006 aaPredicted RBP17.79■□□□□ 0.44
CLK1-211ENST00000481641 TYSND1Q2T9J0 566 aa17.79■□□□□ 0.44
CLK1-211ENST00000481641 SLC6A19Q695T7 634 aa17.79■□□□□ 0.44
CLK1-211ENST00000481641 MRNIPQ6NTE8 343 aa17.79■□□□□ 0.44
CLK1-211ENST00000481641 CAND1Q86VP6 1230 aaKnown RBP17.79■□□□□ 0.44
CLK1-211ENST00000481641 DLG3Q92796 817 aa17.79■□□□□ 0.44
CLK1-211ENST00000481641 MS4A14Q96JA4 679 aa17.79■□□□□ 0.44
CLK1-211ENST00000481641 SELENOSQ9BQE4 189 aa17.79■□□□□ 0.44
CLK1-211ENST00000481641 CUTCQ9NTM9 273 aa17.79■□□□□ 0.44
CLK1-211ENST00000481641 PPP2R2CQ9Y2T4 447 aa17.79■□□□□ 0.44
CLK1-211ENST00000481641 UTP20O75691 2785 aaKnown RBP17.78■□□□□ 0.44
CLK1-211ENST00000481641 USP9YO00507 2555 aaPredicted RBP17.78■□□□□ 0.44
CLK1-211ENST00000481641 A0A1B0GX78 115 aa17.78■□□□□ 0.44
CLK1-211ENST00000481641 A0A1W2PPV9 198 aa17.78■□□□□ 0.44
CLK1-211ENST00000481641 KPNA5O15131 536 aa17.78■□□□□ 0.44
CLK1-211ENST00000481641 MED26O95402 600 aa17.78■□□□□ 0.44
CLK1-211ENST00000481641 CHRM3P20309 590 aa17.78■□□□□ 0.44
CLK1-211ENST00000481641 OR1D4P47884 311 aa17.78■□□□□ 0.44
CLK1-211ENST00000481641 ARSFP54793 590 aa17.78■□□□□ 0.44
CLK1-211ENST00000481641 VSX2P58304 361 aaPredicted RBP17.78■□□□□ 0.44
CLK1-211ENST00000481641 GBX1Q14549 363 aa17.78■□□□□ 0.44
CLK1-211ENST00000481641 ACSBG2Q5FVE4 666 aa17.78■□□□□ 0.44
CLK1-211ENST00000481641 ZC3H12BQ5HYM0 836 aaKnown RBP17.78■□□□□ 0.44
CLK1-211ENST00000481641 KIAA0930Q6ICG6 404 aaPredicted RBP17.78■□□□□ 0.44
CLK1-211ENST00000481641 FRMPD2BQ6IN97 320 aa17.78■□□□□ 0.44
CLK1-211ENST00000481641 CASC4Q6P4E1 433 aa17.78■□□□□ 0.44
CLK1-211ENST00000481641 SHISA6Q6ZSJ9 500 aa17.78■□□□□ 0.44
CLK1-211ENST00000481641 CENPUQ71F23 418 aa17.78■□□□□ 0.44
CLK1-211ENST00000481641 COX15Q7KZN9 410 aa17.78■□□□□ 0.44
CLK1-211ENST00000481641 GALNT16Q8N428 558 aa17.78■□□□□ 0.44
CLK1-211ENST00000481641 GALNT11Q8NCW6 608 aa17.78■□□□□ 0.44
CLK1-211ENST00000481641 FER1L6-AS2Q96M78 137 aa17.78■□□□□ 0.44
CLK1-211ENST00000481641 FOPNLQ96NB1 174 aa17.78■□□□□ 0.44
CLK1-211ENST00000481641 IP6K3Q96PC2 410 aa17.78■□□□□ 0.44
CLK1-211ENST00000481641 RAB11FIP5Q9BXF6 653 aa17.78■□□□□ 0.44
CLK1-211ENST00000481641 SLAMF7Q9NQ25 335 aa17.78■□□□□ 0.44
CLK1-211ENST00000481641 HOMER3Q9NSC5 361 aa17.78■□□□□ 0.44
CLK1-211ENST00000481641 STOX2Q9P2F5 926 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms