RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 H2AFJQ9BTM1 129 aa9.29□□□□□ -0.92
CD46-214ENST00000480003 HGH1Q9BTY7 390 aa9.29□□□□□ -0.92
CD46-214ENST00000480003 TRIM54Q9BYV2 358 aa9.29□□□□□ -0.92
CD46-214ENST00000480003 RAB33BQ9H082 229 aa9.29□□□□□ -0.92
CD46-214ENST00000480003 MRPL46Q9H2W6 279 aaKnown RBP9.29□□□□□ -0.92
CD46-214ENST00000480003 C12orf65Q9H3J6 166 aaKnown RBP9.29□□□□□ -0.92
CD46-214ENST00000480003 STN1Q9H668 368 aaKnown RBP9.29□□□□□ -0.92
CD46-214ENST00000480003 XKR8Q9H6D3 395 aa9.29□□□□□ -0.92
CD46-214ENST00000480003 OR6C2Q9NZP2 312 aa9.29□□□□□ -0.92
CD46-214ENST00000480003 SPATA7Q9P0W8 599 aa9.29□□□□□ -0.92
CD46-214ENST00000480003 EPHA6Q9UF33 1036 aa9.29□□□□□ -0.92
CD46-214ENST00000480003 PLAGL1Q9UM63 463 aa9.29□□□□□ -0.92
CD46-214ENST00000480003 ICKQ9UPZ9 632 aa9.29□□□□□ -0.92
CD46-214ENST00000480003 TDRKHQ9Y2W6 561 aaKnown RBP9.29□□□□□ -0.92
CD46-214ENST00000480003 UNC13CQ8NB66 2214 aa9.29□□□□□ -0.92
CD46-214ENST00000480003 LAMA1P25391 3075 aa9.29□□□□□ -0.92
CD46-214ENST00000480003 KNTC1P50748 2209 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 A0A1W2PPV9 198 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 A0A1W2PQM1 296 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 MED19A0JLT2 244 aaPredicted RBP9.28□□□□□ -0.92
CD46-214ENST00000480003 GOLGA6L10A6NI86 522 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 G3V2L1 256 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 UBXN8O00124 270 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 NTN3O00634 580 aaPredicted RBP9.28□□□□□ -0.92
CD46-214ENST00000480003 CASC3O15234 703 aaKnown RBP9.28□□□□□ -0.92
CD46-214ENST00000480003 PRPF4O43172 522 aaKnown RBP eCLIP9.28□□□□□ -0.92
CD46-214ENST00000480003 SPAG7O75391 227 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 UBXN7O94888 489 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 SLC16A8O95907 504 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 PROCP04070 461 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 ANXA5P08758 320 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 IMPA1P29218 277 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 ALDH4A1P30038 563 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 PKLRP30613 574 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 ETV4P43268 484 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 ACADVLP49748 655 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 RAB28P51157 221 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 SLC18A1P54219 525 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 PNLIPRP1P54315 467 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 MAGOHP61326 146 aaKnown RBP9.28□□□□□ -0.92
CD46-214ENST00000480003 CCL7P80098 99 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 DAB2P98082 770 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 ILKQ13418 452 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 FASTKQ14296 549 aaKnown RBP9.28□□□□□ -0.92
CD46-214ENST00000480003 CCDC153Q494R4 210 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 SULT1C3Q6IMI6 304 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 AGTRAPQ6RW13 159 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 MBOAT1Q6ZNC8 495 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 EFL1Q7Z2Z2 1120 aaKnown RBP9.28□□□□□ -0.92
CD46-214ENST00000480003 SPRED1Q7Z699 444 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 SLCO6A1Q86UG4 719 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 AMIGO1Q86WK6 493 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 KLHDC8AQ8IYD2 350 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 LMNTD1Q8N9Z9 388 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 LINC01555Q8NAE3 123 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 PDPRQ8NCN5 879 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 OR56A3Q8NH54 315 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 FLVCR1-AS1Q8TAF5 88 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 IFI44Q8TCB0 444 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 TCP10LQ8TDR4 215 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 LCN9Q8WX39 176 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 JPH3Q8WXH2 748 aaPredicted RBP9.28□□□□□ -0.92
CD46-214ENST00000480003 APOPT1Q96IL0 206 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 ATP6V1G3Q96LB4 118 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 STMN4Q9H169 189 aaPredicted RBP9.28□□□□□ -0.92
CD46-214ENST00000480003 CENPHQ9H3R5 247 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 LRRN3Q9H3W5 708 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 SRMSQ9H3Y6 488 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 EPB41L1Q9H4G0 881 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 INTS7Q9NVH2 962 aaKnown RBP9.28□□□□□ -0.92
CD46-214ENST00000480003 ARL15Q9NXU5 204 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 UTP6Q9NYH9 597 aaKnown RBP9.28□□□□□ -0.92
CD46-214ENST00000480003 DLL3Q9NYJ7 618 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 SEMA5BQ9P283 1151 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 STOX2Q9P2F5 926 aaPredicted RBP9.28□□□□□ -0.92
CD46-214ENST00000480003 PDP2Q9P2J9 529 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 FTSJ1Q9UET6 329 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 CIDEBQ9UHD4 219 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 LNPEPQ9UIQ6 1025 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 RNF112Q9ULX5 631 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 PCDHGA1Q9Y5H4 931 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 ANKRD12Q6UB98 2062 aa9.28□□□□□ -0.92
CD46-214ENST00000480003 COL5A1P20908 1838 aaPredicted RBP9.28□□□□□ -0.92
CD46-214ENST00000480003 OR6C74A6NCV1 312 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 OR5K3A6NET4 321 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 SYCE1LA8MT33 242 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 KDM1AO60341 852 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 DLX3O60479 287 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 GUCA1CO95843 209 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 PROS1P07225 676 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 CHRM5P08912 532 aaPredicted RBP9.27□□□□□ -0.93
CD46-214ENST00000480003 DHRS4L1P0CG22 281 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 CEACAM1P13688 526 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 NPPBP16860 134 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 AMD1P17707 334 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 PEBP1P30086 187 aaKnown RBP9.27□□□□□ -0.93
CD46-214ENST00000480003 SHMT2P34897 504 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 RPA3P35244 121 aaPredicted RBP9.27□□□□□ -0.93
CD46-214ENST00000480003 SLC6A12P48065 614 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 HNMTP50135 292 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms