RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 ENGP17813 658 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 VCLP18206 1134 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 PSMA3P25788 255 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 ACRV1P26436 265 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 NMBRP28336 390 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 MDH1P40925 334 aaKnown RBP6.07□□□□□ -1.44
SF3B1-209ENST00000479532 ELK3P41970 407 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 TTPAP49638 278 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 SERPINB8P50452 374 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 CCT8P50990 548 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 SRP54P61011 504 aaKnown RBP6.07□□□□□ -1.44
SF3B1-209ENST00000479532 ELF3P78545 371 aaPredicted RBP6.07□□□□□ -1.44
SF3B1-209ENST00000479532 ACVR1Q04771 509 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 ILF2Q12905 390 aaKnown RBP6.07□□□□□ -1.44
SF3B1-209ENST00000479532 MSLNQ13421 630 aaPredicted RBP6.07□□□□□ -1.44
SF3B1-209ENST00000479532 PTPRCAPQ14761 206 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 CCDC6Q16204 474 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 KCTD19Q17RG1 926 aaPredicted RBP6.07□□□□□ -1.44
SF3B1-209ENST00000479532 ANKRD20A4Q4UJ75 823 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 ATP13A5Q4VNC0 1218 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 TMEM177Q53S58 311 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 FNBP1LQ5T0N5 605 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 ZNF449Q6P9G9 518 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 DOK6Q6PKX4 331 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 RFLNAQ6ZTI6 216 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 LHFPL2Q6ZUX7 228 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 GGNQ86UU5 652 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 GALNT13Q8IUC8 556 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 MPP5Q8N3R9 675 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 FBXO36Q8NEA4 188 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 OR13J1Q8NGT2 312 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 OR4L1Q8NH43 312 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 FBXO25Q8TCJ0 367 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 CDKL2Q92772 493 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 USP7Q93009 1102 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 FBXW5Q969U6 566 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 FUBP1Q96AE4 644 aaKnown RBP6.07□□□□□ -1.44
SF3B1-209ENST00000479532 EID2BQ96D98 161 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 CFAP36Q96G28 342 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 COX14Q96I36 57 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 ZNF514Q96K75 400 aaPredicted RBP6.07□□□□□ -1.44
SF3B1-209ENST00000479532 SIGLEC10Q96LC7 697 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 TBATAQ96M53 351 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 JMJD8Q96S16 334 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 CCT8L2Q96SF2 557 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 ELF4Q99607 663 aaPredicted RBP6.07□□□□□ -1.44
SF3B1-209ENST00000479532 COPS8Q99627 209 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 KCNJ15Q99712 375 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 EDEM2Q9BV94 578 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 CCDC68Q9H2F9 335 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 RABEP2Q9H5N1 569 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 GAREM1Q9H706 876 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 TMEM9BQ9NQ34 198 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 SEMA4GQ9NTN9 838 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 C20orf96Q9NUD7 363 aaPredicted RBP6.07□□□□□ -1.44
SF3B1-209ENST00000479532 TBCCD1Q9NVR7 557 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 DNAJC28Q9NX36 388 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 NSMCE4AQ9NXX6 385 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 GRHL1Q9NZI5 618 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 SLAMF8Q9P0V8 285 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 SPATA7Q9P0W8 599 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 SPASTQ9UBP0 616 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 GULP1Q9UBP9 304 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 SLC2A6Q9UGQ3 507 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 APOBEC3BQ9UH17 382 aaKnown RBP6.07□□□□□ -1.44
SF3B1-209ENST00000479532 PAIP2BQ9ULR5 123 aaKnown RBP6.07□□□□□ -1.44
SF3B1-209ENST00000479532 SLC12A4Q9UP95 1085 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 CHMP2BQ9UQN3 213 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 TMEM98Q9Y2Y6 226 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 KCTD3Q9Y597 815 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 CUL9Q8IWT3 2517 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 ADAMTS9Q9P2N4 1935 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 PLXNB3Q9ULL4 1909 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 PRSS38A1L453 326 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 NEMP2A6NFY4 417 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 PATE3B3GLJ2 98 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 ALG1L2C9J202 215 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 E7ESA3 106 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 K7ESM1 405 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 CCL22O00626 93 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 KMOO15229 486 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 CD3EAPO15446 510 aaKnown RBP6.06□□□□□ -1.44
SF3B1-209ENST00000479532 UGT1A9O60656 530 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 KCNJ13O60928 360 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 SMIM24O75264 130 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 NDUFS3O75489 264 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 CDK14O94921 469 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 ANP32DO95626 131 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 SOD1P00441 154 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 CSF2P04141 144 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 S100BP04271 92 aaPredicted RBP6.06□□□□□ -1.44
SF3B1-209ENST00000479532 OR56A5P0C7T3 313 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 TROVE2P10155 538 aaKnown RBP eCLIP6.06□□□□□ -1.44
SF3B1-209ENST00000479532 ATP1B2P14415 290 aaPredicted RBP6.06□□□□□ -1.44
SF3B1-209ENST00000479532 ACADSP16219 412 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 BMP7P18075 431 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 UGT1A6P19224 532 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 OGNP20774 298 aaKnown RBP6.06□□□□□ -1.44
SF3B1-209ENST00000479532 UGT1A1P22309 533 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 UGT1A4P22310 534 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms