RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 Q6ZNB5 142 aa11.71□□□□□ -0.53
PCCB-214ENST00000478469 TTC29Q8NA56 475 aaPredicted RBP11.71□□□□□ -0.53
PCCB-214ENST00000478469 PYDC1Q8WXC3 89 aa11.71□□□□□ -0.53
PCCB-214ENST00000478469 TSACCQ96A04 125 aaPredicted RBP11.71□□□□□ -0.53
PCCB-214ENST00000478469 EGFL7Q9UHF1 273 aa11.71□□□□□ -0.53
PCCB-214ENST00000478469 ADGRE2Q9UHX3 823 aa11.71□□□□□ -0.53
PCCB-214ENST00000478469 INTS6Q9UL03 887 aaKnown RBP11.71□□□□□ -0.53
PCCB-214ENST00000478469 RNF11Q9Y3C5 154 aa11.71□□□□□ -0.53
PCCB-214ENST00000478469 CNTRLQ7Z7A1 2325 aa11.71□□□□□ -0.54
PCCB-214ENST00000478469 MATN2O00339 956 aa11.71□□□□□ -0.54
PCCB-214ENST00000478469 SAP18O00422 153 aaKnown RBP11.71□□□□□ -0.54
PCCB-214ENST00000478469 SLC6A2P23975 617 aa11.71□□□□□ -0.54
PCCB-214ENST00000478469 PTX3P26022 381 aaPredicted RBP11.71□□□□□ -0.54
PCCB-214ENST00000478469 SLC34A1Q06495 639 aa11.71□□□□□ -0.54
PCCB-214ENST00000478469 NET1Q7Z628 596 aaPredicted RBP11.71□□□□□ -0.54
PCCB-214ENST00000478469 NUDT13Q86X67 352 aa11.71□□□□□ -0.54
PCCB-214ENST00000478469 EID3Q8N140 333 aa11.71□□□□□ -0.54
PCCB-214ENST00000478469 KDM1BQ8NB78 822 aa11.71□□□□□ -0.54
PCCB-214ENST00000478469 TET1Q8NFU7 2136 aa11.71□□□□□ -0.54
PCCB-214ENST00000478469 CMTM7Q96FZ5 175 aa11.71□□□□□ -0.54
PCCB-214ENST00000478469 ZNF382Q96SR6 550 aa11.71□□□□□ -0.54
PCCB-214ENST00000478469 SPATA5L1Q9BVQ7 753 aa11.71□□□□□ -0.54
PCCB-214ENST00000478469 MVB12BQ9H7P6 319 aa11.71□□□□□ -0.54
PCCB-214ENST00000478469 RMI1Q9H9A7 625 aa11.71□□□□□ -0.54
PCCB-214ENST00000478469 KRCC1Q9NPI7 259 aaPredicted RBP11.71□□□□□ -0.54
PCCB-214ENST00000478469 MARK1Q9P0L2 795 aa11.71□□□□□ -0.54
PCCB-214ENST00000478469 I6L893 689 aaPredicted RBP11.7□□□□□ -0.54
PCCB-214ENST00000478469 GSC2O15499 205 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 GPR39O43194 453 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 HS6ST1O60243 411 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 KCNJ13O60928 360 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 ATP6V1G2O95670 118 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 APBB3O95704 486 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 IL6P05231 212 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 POU1F1P28069 291 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 RABIFP47224 123 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 SH3BGRP55822 239 aaPredicted RBP11.7□□□□□ -0.54
PCCB-214ENST00000478469 FOXM1Q08050 763 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 SMAD4Q13485 552 aaKnown RBP11.7□□□□□ -0.54
PCCB-214ENST00000478469 SLC9A5Q14940 896 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 GPAT3Q53EU6 434 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 STK32CQ86UX6 486 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 ANKRD49Q8WVL7 239 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 MSANTD3Q96H12 275 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 XKR8Q9H6D3 395 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 KCNK12Q9HB15 430 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 PRDX6P30041 224 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 ANKRD46Q86W74 232 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 CAMKVQ8NCB2 501 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 CD200R1Q8TD46 325 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 DENND1AQ8TEH3 1009 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 RLN3Q8WXF3 142 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 TOE1Q96GM8 510 aaKnown RBP11.7□□□□□ -0.54
PCCB-214ENST00000478469 LRMDAQ9H2I8 198 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 HRASLS2Q9NWW9 162 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 AP4S1Q9Y587 144 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 MROH6A6NGR9 719 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 MANBAO00462 879 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 AXIN1O15169 862 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 ERI3O43414 337 aaKnown RBP11.7□□□□□ -0.54
PCCB-214ENST00000478469 PRPS1L1P21108 318 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 MAGEA3P43357 314 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 MLF2Q15773 248 aaPredicted RBP11.7□□□□□ -0.54
PCCB-214ENST00000478469 CNTN4Q8IWV2 1026 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 PGAM4Q8N0Y7 254 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 C1orf52Q8N6N3 182 aaKnown RBP11.7□□□□□ -0.54
PCCB-214ENST00000478469 OR9Q1Q8NGQ5 310 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 MAPK15Q8TD08 544 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 MYEOVQ96EZ4 313 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 APOOQ9BUR5 198 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 BRINP2Q9C0B6 783 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 OTOFQ9HC10 1997 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 EIF4E1BA6NMX2 242 aaKnown RBP11.7□□□□□ -0.54
PCCB-214ENST00000478469 PRAMEF26H0Y7S4 382 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 NUDT14O95848 222 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 CPN2P22792 545 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 HNRNPKP61978 463 aaKnown RBP eCLIP11.7□□□□□ -0.54
PCCB-214ENST00000478469 KLC1Q07866 573 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 SAMD14Q8IZD0 417 aaPredicted RBP11.7□□□□□ -0.54
PCCB-214ENST00000478469 SLC13A3Q8WWT9 602 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 RGMAQ96B86 450 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 RBM18Q96H35 190 aaKnown RBP11.7□□□□□ -0.54
PCCB-214ENST00000478469 KCNA7Q96RP8 456 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 KLHL4Q9C0H6 718 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 PREBQ9HCU5 417 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 DGKBQ9Y6T7 804 aa11.7□□□□□ -0.54
PCCB-214ENST00000478469 KNTC1P50748 2209 aa11.69□□□□□ -0.54
PCCB-214ENST00000478469 FAM47E-STBD1D6RA91 191 aa11.69□□□□□ -0.54
PCCB-214ENST00000478469 HTRA2O43464 458 aaPredicted RBP11.69□□□□□ -0.54
PCCB-214ENST00000478469 B3GALT2O43825 422 aa11.69□□□□□ -0.54
PCCB-214ENST00000478469 POLR2CP19387 275 aaPredicted RBP11.69□□□□□ -0.54
PCCB-214ENST00000478469 MSX2P35548 267 aaPredicted RBP11.69□□□□□ -0.54
PCCB-214ENST00000478469 P2RY2P41231 377 aa11.69□□□□□ -0.54
PCCB-214ENST00000478469 CCR10P46092 362 aa11.69□□□□□ -0.54
PCCB-214ENST00000478469 ELF3P78545 371 aaPredicted RBP11.69□□□□□ -0.54
PCCB-214ENST00000478469 RFTN2Q52LD8 501 aaPredicted RBP11.69□□□□□ -0.54
PCCB-214ENST00000478469 SLC36A4Q6YBV0 504 aa11.69□□□□□ -0.54
PCCB-214ENST00000478469 C11orf74Q86VG3 221 aa11.69□□□□□ -0.54
PCCB-214ENST00000478469 CDK20Q8IZL9 346 aa11.69□□□□□ -0.54
PCCB-214ENST00000478469 TRPV3Q8NET8 790 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms