RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 FRMD6-AS1P0C7T7 363 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 HSPA8P11142 646 aaKnown RBP3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 STMN1P16949 149 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 CPT2P23786 658 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 PTPN3P26045 913 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 EEF1DP29692 281 aaKnown RBP3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 ATP5DP30049 168 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 HPDP32754 393 aaPredicted RBP3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 MAP2K2P36507 400 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 MNDAP41218 407 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 CD86P42081 329 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 TDO2P48775 406 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 HSD17B7P56937 341 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 HNRNPKP61978 463 aaKnown RBP eCLIP3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 GPR17Q13304 367 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 KYNUQ16719 465 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 ITPRIPL2Q3MIP1 535 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 PHLDA2Q53GA4 152 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 KLHL26Q53HC5 615 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 SYT14P1Q58G82 188 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 ARHGEF16Q5VV41 709 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 KRTAP5-11Q6L8G4 156 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 C11orf63Q6NUN7 778 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 MFSD12Q6NUT3 480 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 DET1Q7L5Y6 550 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 CENPVQ7Z7K6 275 aaPredicted RBP3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 TMPRSS11BQ86T26 416 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 NUDT13Q86X67 352 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 TMEM139Q8IV31 216 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 CDK20Q8IZL9 346 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 TDRD5Q8NAT2 981 aaKnown RBP3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 CENPTQ96BT3 561 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 GIMAP5Q96F15 307 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 PI4K2AQ9BTU6 479 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 MIS12Q9H081 205 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 RABEP2Q9H5N1 569 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 Q9N2K0 584 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 DDX43Q9NXZ2 648 aaKnown RBP3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 TBK1Q9UHD2 729 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 DAPK2Q9UIK4 370 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 CPSF3Q9UKF6 684 aaKnown RBP3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 GTF3C4Q9UKN8 822 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 RIPK3Q9Y572 518 aa3.56□□□□□ -1.84
SMARCA1-204ENST00000478420 A0A1W2PPM1 405 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 A0A1W2PPQ1 181 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 NEMP2A6NFY4 417 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 TRIM77I1YAP6 450 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 ZNF197O14709 1029 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 CPLX1O14810 134 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 SPRY1O43609 319 aaPredicted RBP3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 TBX10O75333 385 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 B3GALNT1O75752 331 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 C22orf31O95567 290 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 GGPS1O95749 300 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 EML2O95834 649 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 NGFP01138 241 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 IGHV2-70P01814 119 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 SLC4A1P02730 911 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 SMIM18P0DKX4 95 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 CA6P23280 308 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 MC5RP33032 325 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 HNF4AP41235 474 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 RAB28P51157 221 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 NR0B1P51843 470 aaKnown RBP3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 CRIP2P52943 208 aaPredicted RBP3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 MAT1AQ00266 395 aaKnown RBP3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 CDR2Q01850 454 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 UBXN1Q04323 297 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 AP1B1Q10567 949 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 RRS1Q15050 365 aaKnown RBP3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 CCDC6Q16204 474 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 ODF4Q2M2E3 257 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 VWC2Q2TAL6 325 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 TMEM30BQ3MIR4 351 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 GTDC1Q4AE62 458 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 TCP11X2Q5H9J9 407 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 CST9LP1Q5W188 147 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 ARHGAP17Q68EM7 881 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 KRT39Q6A163 491 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 PRR27Q6MZM9 219 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 FAM53AQ6NSI3 398 aaPredicted RBP3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 ADAM5Q6NVV9 412 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 ARHGAP11AQ6P4F7 1023 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 DCLRE1AQ6PJP8 1040 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 UNC5DQ6UXZ4 953 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 SLC16A9Q7RTY1 509 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 ARHGAP22Q7Z5H3 698 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 SLFN11Q7Z7L1 901 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 RPAINQ86UA6 219 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 CCDC170Q8IYT3 715 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 ZNF843Q8N446 348 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 MAPKAPK5-AS1Q8N8E1 139 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 ZBTB8BQ8NAP8 495 aaPredicted RBP3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 SPATA3Q8NHX4 192 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 OLIG1Q8TAK6 271 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 PHLDA1Q8WV24 401 aaPredicted RBP3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 TMEM190Q8WZ59 177 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 MOB3AQ96BX8 217 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 HDAC11Q96DB2 347 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms