RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 SPOCD1Q6ZMY3 1216 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 ZC3H18Q86VM9 953 aaKnown RBP7.04□□□□□ -1.28
BRCA1-214ENST00000477152 CDKL3Q8IVW4 592 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-214ENST00000477152 CFAP206Q8IYR0 622 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 DSELQ8IZU8 1212 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 PLD6Q8N2A8 252 aaKnown RBP7.04□□□□□ -1.28
BRCA1-214ENST00000477152 COG1Q8WTW3 980 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 COPS8Q99627 209 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 ACTR5Q9H9F9 607 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-214ENST00000477152 NHEJ1Q9H9Q4 299 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-214ENST00000477152 GPR83Q9NYM4 423 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 WDR37Q9Y2I8 494 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 SPO11Q9Y5K1 396 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 UBR5O95071 2799 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-214ENST00000477152 SLC9B1P1A6NJY1 282 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 H3BS24 57 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 PSMD3O43242 534 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 UGT1A9O60656 530 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 SRP72O76094 671 aaKnown RBP7.04□□□□□ -1.28
BRCA1-214ENST00000477152 GAS8O95995 478 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 ATP1B2P14415 290 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-214ENST00000477152 UGT1A6P19224 532 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 COMTP21964 271 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 UGT1A1P22309 533 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 UGT1A4P22310 534 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 PPARGP37231 505 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-214ENST00000477152 CDKN2BP42772 138 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 MASP1P48740 699 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 ITGA1P56199 1179 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 SKOR2Q2VWA4 1001 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-214ENST00000477152 LYPLAL1Q5VWZ2 237 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 PAPD7Q5XG87 772 aaKnown RBP7.04□□□□□ -1.28
BRCA1-214ENST00000477152 CAPRIN2Q6IMN6 1127 aaKnown RBP7.04□□□□□ -1.28
BRCA1-214ENST00000477152 POMZP3Q6PJE2 187 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 MFSD7Q6UXD7 560 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 SNX20Q7Z614 316 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 SCUBE1Q8IWY4 988 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 CLEC1AQ8NC01 280 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 GPR150Q8NGU9 434 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 PNPLA2Q96AD5 504 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 ZNF501Q96CX3 271 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-214ENST00000477152 TCTN2Q96GX1 697 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 QKIQ96PU8 341 aaKnown RBP eCLIP7.04□□□□□ -1.28
BRCA1-214ENST00000477152 TSSK1BQ9BXA7 367 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 PACSIN1Q9BY11 444 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 UGT1A7Q9HAW7 530 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 UGT1A10Q9HAW8 530 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 UGT1A8Q9HAW9 530 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 ABHD10Q9NUJ1 306 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 NDOR1Q9UHB4 597 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 POLG2Q9UHN1 485 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 POMT2Q9UKY4 750 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 TCFL5Q9UL49 500 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 DOPEY2Q9Y3R5 2298 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 GOLGA6L9A6NEM1 432 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 TMEM150CB9EJG8 249 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 APOC4-APOC2K7ER74 178 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 AURKAO14965 403 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 APOC2P02655 101 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 POLBP06746 335 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 CD3EP07766 207 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 SNRPB2P08579 225 aaKnown RBP7.03□□□□□ -1.28
BRCA1-214ENST00000477152 FURINP09958 794 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 POLR2CP19387 275 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-214ENST00000477152 NR1D1P20393 614 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 SHMT2P34897 504 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 PRLHRP49683 370 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 CTSCP53634 463 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 HADHBP55084 474 aaKnown RBP7.03□□□□□ -1.28
BRCA1-214ENST00000477152 GFRA1P56159 465 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 WASHC5Q12768 1159 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 SSPNQ14714 243 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 KCNAB1Q14722 419 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 GPR19Q15760 415 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 ASTE1Q2TB18 679 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-214ENST00000477152 KHDC1Q4VXA5 237 aaKnown RBP7.03□□□□□ -1.28
BRCA1-214ENST00000477152 VWA5B1Q5TIE3 1220 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 DET1Q7L5Y6 550 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 TMTC1Q8IUR5 882 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 KATNAL2Q8IYT4 538 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 IQCKQ8N0W5 287 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 ZNF567Q8N184 647 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 TXLNBQ8N3L3 684 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 ENDOVQ8N8Q3 282 aaKnown RBP7.03□□□□□ -1.28
BRCA1-214ENST00000477152 GLIS1Q8NBF1 620 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 OR4E2Q8NGC2 313 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 PROKR1Q8TCW9 393 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 DLG3Q92796 817 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 FICDQ9BVA6 458 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 GBA3Q9H227 469 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 CHST8Q9H2A9 424 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 TFB2MQ9H5Q4 396 aaKnown RBP7.03□□□□□ -1.28
BRCA1-214ENST00000477152 MLXIPLQ9NP71 852 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 TXLNGQ9NUQ3 528 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 IRAK4Q9NWZ3 460 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 PLEKHB1Q9UF11 243 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-214ENST00000477152 SRPK3Q9UPE1 567 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 TRAF6Q9Y4K3 522 aa7.03□□□□□ -1.28
BRCA1-214ENST00000477152 ENO4A6NNW6 628 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 AKR1B15C9JRZ8 316 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms