RNA–Protein interactions for RNA: ENST00000474945.1

SPCS1-204, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 2

Gene SPCS1, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-204ENST00000474945 CUL1Q13616 776 aa13.11□□□□□ -0.31
SPCS1-204ENST00000474945 TSTA3Q13630 321 aaPredicted RBP13.11□□□□□ -0.31
SPCS1-204ENST00000474945 SLC9A5Q14940 896 aa13.11□□□□□ -0.31
SPCS1-204ENST00000474945 BBS9Q3SYG4 887 aa13.11□□□□□ -0.31
SPCS1-204ENST00000474945 LACTB2Q53H82 288 aaPredicted RBP13.11□□□□□ -0.31
SPCS1-204ENST00000474945 HSP90AA5PQ58FG0 334 aa13.11□□□□□ -0.31
SPCS1-204ENST00000474945 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.11□□□□□ -0.31
SPCS1-204ENST00000474945 FAM69BQ5VUD6 431 aa13.11□□□□□ -0.31
SPCS1-204ENST00000474945 CPZQ66K79 652 aa13.11□□□□□ -0.31
SPCS1-204ENST00000474945 ZNF517Q6ZMY9 492 aaPredicted RBP13.11□□□□□ -0.31
SPCS1-204ENST00000474945 PCGF5Q86SE9 256 aa13.11□□□□□ -0.31
SPCS1-204ENST00000474945 LMNTD2Q8IXW0 634 aa13.11□□□□□ -0.31
SPCS1-204ENST00000474945 GIMAP7Q8NHV1 300 aa13.11□□□□□ -0.31
SPCS1-204ENST00000474945 SLCO2A1Q92959 643 aa13.11□□□□□ -0.31
SPCS1-204ENST00000474945 ABHD17AQ96GS6 310 aa13.11□□□□□ -0.31
SPCS1-204ENST00000474945 RUNDC3BQ96NL0 473 aa13.11□□□□□ -0.31
SPCS1-204ENST00000474945 DPH2Q9BQC3 489 aaPredicted RBP13.11□□□□□ -0.31
SPCS1-204ENST00000474945 NDC1Q9BTX1 674 aa13.11□□□□□ -0.31
SPCS1-204ENST00000474945 NLNQ9BYT8 704 aa13.11□□□□□ -0.31
SPCS1-204ENST00000474945 FAM114A2Q9NRY5 505 aa13.11□□□□□ -0.31
SPCS1-204ENST00000474945 IARS2Q9NSE4 1012 aaKnown RBP13.11□□□□□ -0.31
SPCS1-204ENST00000474945 EURLQ9NYK6 297 aa13.11□□□□□ -0.31
SPCS1-204ENST00000474945 GALPQ9UBC7 116 aa13.11□□□□□ -0.31
SPCS1-204ENST00000474945 PCYOX1Q9UHG3 505 aa13.11□□□□□ -0.31
SPCS1-204ENST00000474945 HELZ2Q9BYK8 2649 aaKnown RBP13.1□□□□□ -0.31
SPCS1-204ENST00000474945 ARGFXA6NJG6 315 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 ARHGEF33A8MVX0 844 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 MKRN2OSH3BPM6 223 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 DNAJB5O75953 348 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 CATP04040 527 aaKnown RBP13.1□□□□□ -0.31
SPCS1-204ENST00000474945 RAB40ALP0C0E4 278 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 PTGIRP43119 386 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 GABRA4P48169 554 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 CLCN7P51798 805 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 CHAF1BQ13112 559 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 GBX1Q14549 363 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 KLHL38Q2WGJ6 581 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 TLDC1Q6P9B6 456 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 DNAJC22Q8N4W6 341 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 PROKR1Q8TCW9 393 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 DENND1AQ8TEH3 1009 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 THAP4Q8WY91 577 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 KCNJ9Q92806 393 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 CFAP36Q96G28 342 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 SIGLEC10Q96LC7 697 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 MIPEPQ99797 713 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 C17orf62Q9BQA9 187 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 TRIM51Q9BSJ1 452 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 DHCR7Q9UBM7 475 aaKnown RBP13.1□□□□□ -0.31
SPCS1-204ENST00000474945 NDOR1Q9UHB4 597 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 GPN3Q9UHW5 284 aaPredicted RBP13.1□□□□□ -0.31
SPCS1-204ENST00000474945 FBXO5Q9UKT4 447 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 TCFL5Q9UL49 500 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 TP53TG5Q9Y2B4 290 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 SAR1BQ9Y6B6 198 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 FAM169AQ9Y6X4 670 aa13.1□□□□□ -0.31
SPCS1-204ENST00000474945 VPS26AO75436 327 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 FKBP9O95302 570 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 MATN4O95460 622 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 TTC4O95801 387 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 SYF2O95926 243 aaKnown RBP13.09□□□□□ -0.31
SPCS1-204ENST00000474945 RECKO95980 971 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 CBSLP0DN79 551 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 ERVK-10P10266 1014 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 NR1D1P20393 614 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 CBSP35520 551 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 GRIA3P42263 894 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 SPANXN3Q5MJ09 141 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 PAPD7Q5XG87 772 aaKnown RBP13.09□□□□□ -0.31
SPCS1-204ENST00000474945 ZNF385CQ66K41 422 aaPredicted RBP13.09□□□□□ -0.31
SPCS1-204ENST00000474945 RHBDD2Q6NTF9 364 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 ZNF549Q6P9A3 640 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 ATG14Q6ZNE5 492 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 SYDE1Q6ZW31 735 aaPredicted RBP13.09□□□□□ -0.31
SPCS1-204ENST00000474945 CREG2Q8IUH2 290 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 CPNE9Q8IYJ1 553 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 OR2L3Q8NG85 312 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 OR9A1PQ8NGU1 263 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 GABPB2Q8TAK5 448 aaPredicted RBP13.09□□□□□ -0.31
SPCS1-204ENST00000474945 DLG3Q92796 817 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 GBP5Q96PP8 586 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 NDNQ99608 321 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 GPR21Q99679 349 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 SLC30A3Q99726 388 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 SELENOSQ9BQE4 189 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 ACAT2Q9BWD1 397 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 PPANQ9NQ55 473 aaKnown RBP13.09□□□□□ -0.31
SPCS1-204ENST00000474945 IFT80Q9P2H3 777 aaPredicted RBP13.09□□□□□ -0.31
SPCS1-204ENST00000474945 TRMT6Q9UJA5 497 aaKnown RBP13.09□□□□□ -0.31
SPCS1-204ENST00000474945 CHMP2BQ9UQN3 213 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 COMMD10Q9Y6G5 202 aa13.09□□□□□ -0.31
SPCS1-204ENST00000474945 H3BMH7 237 aa13.08□□□□□ -0.32
SPCS1-204ENST00000474945 MYO1CO00159 1063 aa13.08□□□□□ -0.32
SPCS1-204ENST00000474945 TTI1O43156 1089 aa13.08□□□□□ -0.32
SPCS1-204ENST00000474945 PSIP1O75475 530 aaKnown RBP13.08□□□□□ -0.32
SPCS1-204ENST00000474945 CAPN1P07384 714 aa13.08□□□□□ -0.32
SPCS1-204ENST00000474945 ENO3P13929 434 aaPredicted RBP13.08□□□□□ -0.32
SPCS1-204ENST00000474945 CMPK1P30085 196 aa13.08□□□□□ -0.32
SPCS1-204ENST00000474945 OTX2P32243 289 aa13.08□□□□□ -0.32
SPCS1-204ENST00000474945 RPA3P35244 121 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms