RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 TTLL8A6PVC2 850 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 E5RI56 91 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 ZNF749O43361 778 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 CHRM5P08912 532 aaPredicted RBP14.6□□□□□ -0.07
VARS-223ENST00000474643 UGT2B7P16662 529 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 ELK3P41970 407 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 RRADP55042 308 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 PDIA2Q13087 525 aaKnown RBP14.6□□□□□ -0.07
VARS-223ENST00000474643 CRYMQ14894 314 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 KYNUQ16719 465 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 TYSND1Q2T9J0 566 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 DEFB110Q30KQ9 67 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 PTCHD3Q3KNS1 767 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 MSS51Q4VC12 460 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 SPANXN3Q5MJ09 141 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 CPZQ66K79 652 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 UNC5AQ6ZN44 842 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 CDHR3Q6ZTQ4 885 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 KCNMB4Q86W47 210 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 CILP2Q8IUL8 1156 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 ANKMY2Q8IV38 441 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 LMNTD2Q8IXW0 634 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 ADGRF3Q8IZF5 1079 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 AGGF1Q8N302 714 aaeCLIP14.6□□□□□ -0.07
VARS-223ENST00000474643 RAB42Q8N4Z0 105 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 SLC38A9Q8NBW4 561 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 OR5K2Q8NHB8 316 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 ASZ1Q8WWH4 475 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 CARD6Q9BX69 1037 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 IARS2Q9NSE4 1012 aaKnown RBP14.6□□□□□ -0.07
VARS-223ENST00000474643 PCMTD2Q9NV79 361 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 INTS10Q9NVR2 710 aaKnown RBP14.6□□□□□ -0.07
VARS-223ENST00000474643 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.6□□□□□ -0.07
VARS-223ENST00000474643 WHRNQ9P202 907 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 MAP10Q9P2G4 905 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 ZC3H7BQ9UGR2 993 aaKnown RBP14.6□□□□□ -0.07
VARS-223ENST00000474643 TCFL5Q9UL49 500 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 PLAGL1Q9UM63 463 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 FAM169AQ9Y6X4 670 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 H3BMM5 538 aa14.59□□□□□ -0.07
VARS-223ENST00000474643 KPNA5O15131 536 aa14.59□□□□□ -0.07
VARS-223ENST00000474643 VPS4BO75351 444 aa14.59□□□□□ -0.07
VARS-223ENST00000474643 MSL3P1P0C860 447 aa14.59□□□□□ -0.07
VARS-223ENST00000474643 CHRM3P20309 590 aa14.59□□□□□ -0.07
VARS-223ENST00000474643 RPS3P23396 243 aaKnown RBP eCLIP14.59□□□□□ -0.077e-10■■■■■ 28.8
VARS-223ENST00000474643 OTX2P32243 289 aa14.59□□□□□ -0.07
VARS-223ENST00000474643 CCR7P32248 378 aa14.59□□□□□ -0.07
VARS-223ENST00000474643 FOXK1P85037 733 aa14.59□□□□□ -0.07
VARS-223ENST00000474643 CTBP1Q13363 440 aa14.59□□□□□ -0.07
VARS-223ENST00000474643 NCF4Q15080 339 aa14.59□□□□□ -0.07
VARS-223ENST00000474643 HSP90AA5PQ58FG0 334 aa14.59□□□□□ -0.07
VARS-223ENST00000474643 PLEKHS1Q5SXH7 462 aa14.59□□□□□ -0.07
VARS-223ENST00000474643 C1orf189Q5VU69 101 aa14.59□□□□□ -0.07
VARS-223ENST00000474643 MLIPQ5VWP3 458 aa14.59□□□□□ -0.07
VARS-223ENST00000474643 CENPUQ71F23 418 aa14.59□□□□□ -0.07
VARS-223ENST00000474643 OTOAQ7RTW8 1153 aa14.59□□□□□ -0.07
VARS-223ENST00000474643 DENND6AQ8IWF6 608 aa14.59□□□□□ -0.07
VARS-223ENST00000474643 LKAAEAR1Q8TD35 194 aa14.59□□□□□ -0.07
VARS-223ENST00000474643 LRRC39Q96DD0 335 aa14.59□□□□□ -0.07
VARS-223ENST00000474643 NDC1Q9BTX1 674 aa14.59□□□□□ -0.07
VARS-223ENST00000474643 TRIM55Q9BYV6 548 aa14.59□□□□□ -0.07
VARS-223ENST00000474643 P2RY12Q9H244 342 aa14.59□□□□□ -0.07
VARS-223ENST00000474643 FBXO6Q9NRD1 293 aaPredicted RBP14.59□□□□□ -0.07
VARS-223ENST00000474643 INTS7Q9NVH2 962 aaKnown RBP14.59□□□□□ -0.07
VARS-223ENST00000474643 IFT80Q9P2H3 777 aaPredicted RBP14.59□□□□□ -0.07
VARS-223ENST00000474643 SLC39A10Q9ULF5 831 aa14.59□□□□□ -0.07
VARS-223ENST00000474643 VPS4AQ9UN37 437 aa14.59□□□□□ -0.07
VARS-223ENST00000474643 UBR5O95071 2799 aaPredicted RBP14.58□□□□□ -0.07
VARS-223ENST00000474643 A6NL46 340 aa14.58□□□□□ -0.08
VARS-223ENST00000474643 PEX12O00623 359 aa14.58□□□□□ -0.08
VARS-223ENST00000474643 ZSCAN9O15535 394 aaPredicted RBP14.58□□□□□ -0.08
VARS-223ENST00000474643 ESR1P03372 595 aa14.58□□□□□ -0.08
VARS-223ENST00000474643 CD63P08962 238 aa14.58□□□□□ -0.08
VARS-223ENST00000474643 ERVK-10P10266 1014 aa14.58□□□□□ -0.08
VARS-223ENST00000474643 FOLR3P41439 243 aa14.58□□□□□ -0.08
VARS-223ENST00000474643 SLC1A2P43004 574 aa14.58□□□□□ -0.08
VARS-223ENST00000474643 MLLT10P55197 1068 aa14.58□□□□□ -0.08
VARS-223ENST00000474643 CBLBQ13191 982 aa14.58□□□□□ -0.08
VARS-223ENST00000474643 KIR2DS3Q14952 304 aa14.58□□□□□ -0.08
VARS-223ENST00000474643 LPGAT1Q92604 370 aa14.58□□□□□ -0.08
VARS-223ENST00000474643 SLC22A18Q96BI1 424 aa14.58□□□□□ -0.08
VARS-223ENST00000474643 FAM136AQ96C01 138 aa14.58□□□□□ -0.08
VARS-223ENST00000474643 FOPNLQ96NB1 174 aa14.58□□□□□ -0.08
VARS-223ENST00000474643 NRTNQ99748 197 aa14.58□□□□□ -0.08
VARS-223ENST00000474643 DHRS4Q9BTZ2 278 aa14.58□□□□□ -0.08
VARS-223ENST00000474643 FBXO5Q9UKT4 447 aa14.58□□□□□ -0.08
VARS-223ENST00000474643 SRPK3Q9UPE1 567 aa14.58□□□□□ -0.08
VARS-223ENST00000474643 PLAAQ9Y263 795 aa14.58□□□□□ -0.08
VARS-223ENST00000474643 ZNF451Q9Y4E5 1061 aa14.58□□□□□ -0.08
VARS-223ENST00000474643 SLC5A10A0PJK1 596 aa14.57□□□□□ -0.08
VARS-223ENST00000474643 BHMG1C9JSJ3 638 aaPredicted RBP14.57□□□□□ -0.08
VARS-223ENST00000474643 K7EM74 188 aa14.57□□□□□ -0.08
VARS-223ENST00000474643 NIPSNAP2O75323 286 aa14.57□□□□□ -0.08
VARS-223ENST00000474643 SLU7O95391 586 aaKnown RBP14.57□□□□□ -0.08
VARS-223ENST00000474643 PKMP14618 531 aaKnown RBP14.57□□□□□ -0.08
VARS-223ENST00000474643 RORAP35398 523 aa14.57□□□□□ -0.08
VARS-223ENST00000474643 RAB28P51157 221 aa14.57□□□□□ -0.08
VARS-223ENST00000474643 PLTPP55058 493 aa14.57□□□□□ -0.08
VARS-223ENST00000474643 DCDP81605 110 aaKnown RBP14.57□□□□□ -0.08
VARS-223ENST00000474643 SLC7A5Q01650 507 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms