RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 THOC3Q96J01 351 aaKnown RBP8.93□□□□□ -0.98
VCL-204ENST00000472585 VAT1Q99536 393 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 DNAJC7Q99615 494 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 FAM118BQ9BPY3 351 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 TRIM56Q9BRZ2 755 aaKnown RBP8.93□□□□□ -0.98
VCL-204ENST00000472585 HEMGNQ9BXL5 484 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 FSD1LQ9BXM9 530 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 MCCC2Q9HCC0 563 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 DDX56Q9NY93 547 aaKnown RBP8.93□□□□□ -0.98
VCL-204ENST00000472585 IFNKQ9P0W0 207 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 STOX2Q9P2F5 926 aaPredicted RBP8.93□□□□□ -0.98
VCL-204ENST00000472585 LCMT1Q9UIC8 334 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 CDC23Q9UJX2 597 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 PLCL2Q9UPR0 1127 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 NEU2Q9Y3R4 380 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 ALG6Q9Y672 507 aa8.93□□□□□ -0.98
VCL-204ENST00000472585 OR51F1A6NGY5 319 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 C19orf84I3L1E1 186 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 NRP2O60462 931 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 UNC5CO95185 931 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 CELA2AP08217 269 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 TPH1P17752 444 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 MAGP20916 626 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 MST1P26927 711 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 CA7P43166 264 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 GEMP55040 296 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 TFDP2Q14188 446 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 SLC5A12Q1EHB4 618 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 MSS51Q4VC12 460 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 ANKRD20A2Q5SQ80 823 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 ANKRD20A1Q5TYW2 823 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 ANKRD20A3Q5VUR7 823 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 ATG9BQ674R7 924 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 ISLR2Q6UXK2 745 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 BZW1Q7L1Q6 419 aaKnown RBP8.92□□□□□ -0.98
VCL-204ENST00000472585 HOOK3Q86VS8 718 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 VRK3Q8IV63 474 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 KLHDC8BQ8IXV7 354 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 SHISA5Q8N114 240 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 NR4A3Q92570 626 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 KRT35Q92764 455 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 P3H4Q92791 437 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 NACC2Q96BF6 587 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 ULK4Q96C45 1275 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 C8orf44Q96CB5 159 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 CDKN2AIPNLQ96HQ2 116 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 VPS50Q96JG6 964 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 IL17FQ96PD4 163 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 NDC1Q9BTX1 674 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 LHPPQ9H008 270 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 SLC26A1Q9H2B4 701 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 WDR54Q9H977 334 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 ARNT2Q9HBZ2 717 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 TXLNGQ9NUQ3 528 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 TRHDEQ9UKU6 1024 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 TFR2Q9UP52 801 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 ASF1AQ9Y294 204 aa8.92□□□□□ -0.98
VCL-204ENST00000472585 TDRKHQ9Y2W6 561 aaKnown RBP8.92□□□□□ -0.98
VCL-204ENST00000472585 NCOA6Q14686 2063 aaPredicted RBP8.92□□□□□ -0.98
VCL-204ENST00000472585 A0A1B0GX78 115 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 DYTNA2CJ06 578 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 KRT87PA6NCN2 255 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 HACD1B0YJ81 288 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 ISM1B1AKI9 464 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 H7C0S8 307 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 OR1I1O60431 355 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 CTSVO60911 334 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 SNRNP200O75643 2136 aaKnown RBP8.91□□□□□ -0.98
VCL-204ENST00000472585 CLDN14O95500 239 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 F10P00742 488 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 ALBP02768 609 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 RALBP11234 206 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 ITGALP20701 1170 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 AGAP20933 346 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 SHMT2P34897 504 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 SLC1A1P43005 524 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 EFNA3P52797 238 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 YBX1P67809 324 aaKnown RBP8.91□□□□□ -0.98
VCL-204ENST00000472585 ARG2P78540 354 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 MFAP5Q13361 173 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 INAQ16352 499 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 GPR33Q49SQ1 333 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 TFDP3Q5H9I0 405 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 KCTD11Q693B1 232 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 FAAH2Q6GMR7 532 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 BBS12Q6ZW61 710 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 TAS2R42Q7RTR8 314 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 CCDC50Q8IVM0 306 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 TBC1D21Q8IYX1 336 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 OR8K1Q8NGG5 319 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 OR5K2Q8NHB8 316 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 CCDC110Q8TBZ0 833 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 FKBP10Q96AY3 582 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 ZNF285Q96NJ3 590 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 LMF1Q96S06 567 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 SYNPO2LQ9H987 977 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 ENAMQ9NRM1 1142 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 CUTCQ9NTM9 273 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 NLE1Q9NVX2 485 aaPredicted RBP8.91□□□□□ -0.98
VCL-204ENST00000472585 PIH1D1Q9NWS0 290 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms