RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 ZC3H12BQ5HYM0 836 aaKnown RBP18.14■□□□□ 0.49
SORT1-203ENST00000471996 HIBCHQ6NVY1 386 aaPredicted RBP18.14■□□□□ 0.49
SORT1-203ENST00000471996 RIPOR1Q6ZS17 1223 aa18.14■□□□□ 0.49
SORT1-203ENST00000471996 H2AFVQ71UI9 128 aa18.14■□□□□ 0.49
SORT1-203ENST00000471996 SPPL2CQ8IUH8 684 aa18.14■□□□□ 0.49
SORT1-203ENST00000471996 PRSS58Q8IYP2 241 aa18.14■□□□□ 0.49
SORT1-203ENST00000471996 DTWD1Q8N5C7 304 aa18.14■□□□□ 0.49
SORT1-203ENST00000471996 CLDN19Q8N6F1 224 aa18.14■□□□□ 0.49
SORT1-203ENST00000471996 RNF25Q96BH1 459 aaPredicted RBP18.14■□□□□ 0.49
SORT1-203ENST00000471996 C19orf43Q9BQ61 176 aa18.14■□□□□ 0.49
SORT1-203ENST00000471996 FICDQ9BVA6 458 aa18.14■□□□□ 0.49
SORT1-203ENST00000471996 ZNF304Q9HCX3 659 aa18.14■□□□□ 0.49
SORT1-203ENST00000471996 LUC7LQ9NQ29 371 aaKnown RBP18.14■□□□□ 0.49
SORT1-203ENST00000471996 ZNF282Q9UDV7 671 aaPredicted RBP18.14■□□□□ 0.49
SORT1-203ENST00000471996 NENFQ9UMX5 172 aa18.14■□□□□ 0.49
SORT1-203ENST00000471996 ANKHD1Q8IWZ3 2542 aaKnown RBP18.13■□□□□ 0.49
SORT1-203ENST00000471996 KDM1AO60341 852 aa18.13■□□□□ 0.49
SORT1-203ENST00000471996 KRT1P04264 644 aa18.13■□□□□ 0.49
SORT1-203ENST00000471996 UQCRHP07919 91 aa18.13■□□□□ 0.49
SORT1-203ENST00000471996 ACRV1P26436 265 aa18.13■□□□□ 0.49
SORT1-203ENST00000471996 GRIA3P42263 894 aa18.13■□□□□ 0.49
SORT1-203ENST00000471996 CDKN1CP49918 316 aaPredicted RBP18.13■□□□□ 0.49
SORT1-203ENST00000471996 MESDQ14696 234 aa18.13■□□□□ 0.49
SORT1-203ENST00000471996 CNSTQ6PJW8 725 aa18.13■□□□□ 0.49
SORT1-203ENST00000471996 RANBP10Q6VN20 620 aa18.13■□□□□ 0.49
SORT1-203ENST00000471996 SERPINA9Q86WD7 417 aa18.13■□□□□ 0.49
SORT1-203ENST00000471996 NAP1L5Q96NT1 182 aaPredicted RBP18.13■□□□□ 0.49
SORT1-203ENST00000471996 RSPH14Q9UHP6 348 aa18.13■□□□□ 0.49
SORT1-203ENST00000471996 TRBV5-4A0A0C4DH59 114 aa18.12■□□□□ 0.49
SORT1-203ENST00000471996 FAM221AA4D161 298 aa18.12■□□□□ 0.49
SORT1-203ENST00000471996 FAM155BO75949 473 aa18.12■□□□□ 0.49
SORT1-203ENST00000471996 CRTAMO95727 393 aa18.12■□□□□ 0.49
SORT1-203ENST00000471996 CELA2AP08217 269 aa18.12■□□□□ 0.49
SORT1-203ENST00000471996 PECAM1P16284 738 aaPredicted RBP18.12■□□□□ 0.49
SORT1-203ENST00000471996 ZNF140P52738 457 aaPredicted RBP18.12■□□□□ 0.49
SORT1-203ENST00000471996 MSLNQ13421 630 aaPredicted RBP18.12■□□□□ 0.49
SORT1-203ENST00000471996 LONRF1Q17RB8 773 aa18.12■□□□□ 0.49
SORT1-203ENST00000471996 KRTCAP3Q53RY4 240 aa18.12■□□□□ 0.49
SORT1-203ENST00000471996 NCCRP1Q6ZVX7 275 aaPredicted RBP18.12■□□□□ 0.49
SORT1-203ENST00000471996 LAPTM4BQ86VI4 370 aa18.12■□□□□ 0.49
SORT1-203ENST00000471996 CTNNBL1Q8WYA6 563 aaPredicted RBP18.12■□□□□ 0.49
SORT1-203ENST00000471996 GPR137Q96N19 417 aa18.12■□□□□ 0.49
SORT1-203ENST00000471996 SELENOSQ9BQE4 189 aa18.12■□□□□ 0.49
SORT1-203ENST00000471996 INTS7Q9NVH2 962 aaKnown RBP18.12■□□□□ 0.49
SORT1-203ENST00000471996 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.12■□□□□ 0.49
SORT1-203ENST00000471996 TRHDEQ9UKU6 1024 aa18.12■□□□□ 0.49
SORT1-203ENST00000471996 IGLV3-12A0A075B6K2 115 aa18.11■□□□□ 0.49
SORT1-203ENST00000471996 IGHV1-45A0A0A0MS14 117 aa18.11■□□□□ 0.49
SORT1-203ENST00000471996 A0A1B0GTH6 734 aa18.11■□□□□ 0.49
SORT1-203ENST00000471996 CCL22O00626 93 aa18.11■□□□□ 0.49
SORT1-203ENST00000471996 AP2A2O94973 939 aa18.11■□□□□ 0.49
SORT1-203ENST00000471996 MED26O95402 600 aa18.11■□□□□ 0.49
SORT1-203ENST00000471996 CXCR2P25025 360 aa18.11■□□□□ 0.49
SORT1-203ENST00000471996 PKLRP30613 574 aa18.11■□□□□ 0.49
SORT1-203ENST00000471996 MC4RP32245 332 aa18.11■□□□□ 0.49
SORT1-203ENST00000471996 ARHGAP25P42331 645 aa18.11■□□□□ 0.49
SORT1-203ENST00000471996 GEMP55040 296 aa18.11■□□□□ 0.49
SORT1-203ENST00000471996 EEF1A2Q05639 463 aaKnown RBP18.11■□□□□ 0.49
SORT1-203ENST00000471996 BRD3Q15059 726 aa18.11■□□□□ 0.49
SORT1-203ENST00000471996 ODF2Q5BJF6 829 aa18.11■□□□□ 0.49
SORT1-203ENST00000471996 ABHD17BQ5VST6 288 aa18.11■□□□□ 0.49
SORT1-203ENST00000471996 PRMT9Q6P2P2 845 aa18.11■□□□□ 0.49
SORT1-203ENST00000471996 FIGLAQ6QHK4 219 aa18.11■□□□□ 0.49
SORT1-203ENST00000471996 MFSD7Q6UXD7 560 aa18.11■□□□□ 0.49
SORT1-203ENST00000471996 ARHGEF18Q6ZSZ5 1173 aa18.11■□□□□ 0.49
SORT1-203ENST00000471996 LINC01555Q8NAE3 123 aa18.11■□□□□ 0.49
SORT1-203ENST00000471996 SLC22A18Q96BI1 424 aa18.11■□□□□ 0.49
SORT1-203ENST00000471996 APOL2Q9BQE5 337 aa18.11■□□□□ 0.49
SORT1-203ENST00000471996 RIC8BQ9NVN3 520 aa18.11■□□□□ 0.49
SORT1-203ENST00000471996 STMN3Q9NZ72 180 aa18.11■□□□□ 0.49
SORT1-203ENST00000471996 FBN3Q75N90 2809 aa18.1■□□□□ 0.49
SORT1-203ENST00000471996 HYKKA2RU49 373 aa18.1■□□□□ 0.49
SORT1-203ENST00000471996 BHMG1C9JSJ3 638 aaPredicted RBP18.1■□□□□ 0.49
SORT1-203ENST00000471996 SRPX2O60687 465 aaPredicted RBP18.1■□□□□ 0.49
SORT1-203ENST00000471996 ANXA9O76027 345 aa18.1■□□□□ 0.49
SORT1-203ENST00000471996 ZRANB2O95218 330 aaKnown RBP eCLIP18.1■□□□□ 0.49
SORT1-203ENST00000471996 PRSS56P0CW18 603 aa18.1■□□□□ 0.49
SORT1-203ENST00000471996 ITGAMP11215 1152 aa18.1■□□□□ 0.49
SORT1-203ENST00000471996 ADRA1AP35348 466 aa18.1■□□□□ 0.49
SORT1-203ENST00000471996 EMP2P54851 167 aa18.1■□□□□ 0.49
SORT1-203ENST00000471996 OLIG2Q13516 323 aa18.1■□□□□ 0.49
SORT1-203ENST00000471996 TFDP2Q14188 446 aa18.1■□□□□ 0.49
SORT1-203ENST00000471996 ZNF766Q5HY98 468 aa18.1■□□□□ 0.49
SORT1-203ENST00000471996 WASHC2DQ5SRD0 308 aa18.1■□□□□ 0.49
SORT1-203ENST00000471996 LRRC38Q5VT99 294 aa18.1■□□□□ 0.49
SORT1-203ENST00000471996 PHF10Q8WUB8 498 aaKnown RBP18.1■□□□□ 0.49
SORT1-203ENST00000471996 ELMO1Q92556 727 aa18.1■□□□□ 0.49
SORT1-203ENST00000471996 GORASP1Q9BQQ3 440 aa18.1■□□□□ 0.49
SORT1-203ENST00000471996 TMEM121Q9BTD3 319 aa18.1■□□□□ 0.49
SORT1-203ENST00000471996 PACSIN1Q9BY11 444 aa18.1■□□□□ 0.49
SORT1-203ENST00000471996 TNFRSF10DQ9UBN6 386 aa18.1■□□□□ 0.49
SORT1-203ENST00000471996 CACNA1CQ13936 2221 aa18.09■□□□□ 0.49
SORT1-203ENST00000471996 SLC5A10A0PJK1 596 aa18.09■□□□□ 0.49
SORT1-203ENST00000471996 IDSB3KWA1 339 aa18.09■□□□□ 0.49
SORT1-203ENST00000471996 FAM227AF5H4B4 570 aa18.09■□□□□ 0.49
SORT1-203ENST00000471996 CST8O60676 142 aa18.09■□□□□ 0.49
SORT1-203ENST00000471996 MLYCDO95822 493 aa18.09■□□□□ 0.49
SORT1-203ENST00000471996 S1PR4O95977 384 aa18.09■□□□□ 0.49
SORT1-203ENST00000471996 VSX2P58304 361 aaPredicted RBP18.09■□□□□ 0.49
SORT1-203ENST00000471996 AP2B1P63010 937 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms