RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 PSMB5P28074 263 aa11.75□□□□□ -0.53
HDAC3-204ENST00000469207 CETN2P41208 172 aa11.75□□□□□ -0.53
HDAC3-204ENST00000469207 TSTD2Q5T7W7 516 aa11.75□□□□□ -0.53
HDAC3-204ENST00000469207 C1QL3Q5VWW1 255 aa11.75□□□□□ -0.53
HDAC3-204ENST00000469207 LINC00696Q6ZRV3 163 aa11.75□□□□□ -0.53
HDAC3-204ENST00000469207 SPNS2Q8IVW8 549 aa11.75□□□□□ -0.53
HDAC3-204ENST00000469207 TTC13Q8NBP0 860 aa11.75□□□□□ -0.53
HDAC3-204ENST00000469207 ST6GALNAC3Q8NDV1 305 aa11.75□□□□□ -0.53
HDAC3-204ENST00000469207 OR6P1Q8NGX9 317 aa11.75□□□□□ -0.53
HDAC3-204ENST00000469207 OR4L1Q8NH43 312 aa11.75□□□□□ -0.53
HDAC3-204ENST00000469207 TM9SF4Q92544 642 aa11.75□□□□□ -0.53
HDAC3-204ENST00000469207 C8orf44Q96CB5 159 aa11.75□□□□□ -0.53
HDAC3-204ENST00000469207 LRRC45Q96CN5 670 aa11.75□□□□□ -0.53
HDAC3-204ENST00000469207 THOC3Q96J01 351 aaKnown RBP11.75□□□□□ -0.53
HDAC3-204ENST00000469207 WDR77Q9BQA1 342 aaPredicted RBP11.75□□□□□ -0.53
HDAC3-204ENST00000469207 MARCH4Q9P2E8 410 aaPredicted RBP11.75□□□□□ -0.53
HDAC3-204ENST00000469207 AMFRQ9UKV5 643 aa11.75□□□□□ -0.53
HDAC3-204ENST00000469207 NFS1Q9Y697 457 aa11.75□□□□□ -0.53
HDAC3-204ENST00000469207 MYO9AB2RTY4 2548 aa11.75□□□□□ -0.53
HDAC3-204ENST00000469207 DOPEY1Q5JWR5 2465 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 LOC105369274A0A096LPK9 316 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 LOC102723532A0A0G2JNH3 316 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 GOLGA6L9A6NEM1 432 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 QSOX1O00391 747 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 E2F3O00716 465 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 FFAR3O14843 346 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 DSCR3O14972 297 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 GPR42O15529 346 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 PSMD3O43242 534 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 PRICKLE3O43900 615 aaPredicted RBP11.74□□□□□ -0.53
HDAC3-204ENST00000469207 IPO13O94829 963 aaKnown RBP11.74□□□□□ -0.53
HDAC3-204ENST00000469207 ONECUT2O95948 504 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 PRF1P14222 555 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 AOAHP28039 575 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 ARSFP54793 590 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 VSX2P58304 361 aaPredicted RBP11.74□□□□□ -0.53
HDAC3-204ENST00000469207 PLOD1Q02809 727 aaPredicted RBP11.74□□□□□ -0.53
HDAC3-204ENST00000469207 CDH17Q12864 832 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 CDC16Q13042 620 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 P3H1Q32P28 736 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 WASHC2DQ5SRD0 308 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 AGAP7PQ5VUJ5 663 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 IGFL2Q6UWQ7 119 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 PEX26Q7Z412 305 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 LAPTM4BQ86VI4 370 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 OR4N4Q8N0Y3 316 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 OR11G2Q8NGC1 345 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 DLG3Q92796 817 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 AGAP4Q96P64 663 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 CARD6Q9BX69 1037 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 AGPAT4Q9NRZ5 378 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 ZC3H7BQ9UGR2 993 aaKnown RBP11.74□□□□□ -0.53
HDAC3-204ENST00000469207 TSR3Q9UJK0 312 aaKnown RBP11.74□□□□□ -0.53
HDAC3-204ENST00000469207 SLC39A10Q9ULF5 831 aa11.74□□□□□ -0.53
HDAC3-204ENST00000469207 A0A0J9YVX5 310 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 VSTM2BA6NLU5 285 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 BTNL10A8MVZ5 291 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 RASGRF2O14827 1237 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 ZG16O60844 167 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 F10P00742 488 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 IFNB1P01574 187 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 ALBP02768 609 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 EIF2S1P05198 315 aaKnown RBP11.73□□□□□ -0.53
HDAC3-204ENST00000469207 ADRA1DP25100 572 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 BDKRB1P46663 353 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 KLC1Q07866 573 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 FASTKQ14296 549 aaKnown RBP11.73□□□□□ -0.53
HDAC3-204ENST00000469207 ZNF169Q14929 603 aaPredicted RBP11.73□□□□□ -0.53
HDAC3-204ENST00000469207 RBBP7Q16576 425 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 SKOR2Q2VWA4 1001 aaPredicted RBP11.73□□□□□ -0.53
HDAC3-204ENST00000469207 FASTKD1Q53R41 847 aaKnown RBP11.73□□□□□ -0.53
HDAC3-204ENST00000469207 DNAJC21Q5F1R6 531 aaKnown RBP11.73□□□□□ -0.53
HDAC3-204ENST00000469207 VWA2Q5GFL6 755 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 AFTPHQ6ULP2 937 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 PPP1R21Q6ZMI0 780 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 CNTRLQ7Z7A1 2325 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 LINC00523Q86TU6 105 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 OR2L8Q8NGY9 312 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 PPP4R1Q8TF05 950 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 FAR1Q8WVX9 515 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 ASZ1Q8WWH4 475 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 MIPEPQ99797 713 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 SELENOSQ9BQE4 189 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 LHPPQ9H008 270 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 SYNPO2LQ9H987 977 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 LUC7LQ9NQ29 371 aaKnown RBP11.73□□□□□ -0.53
HDAC3-204ENST00000469207 CHRAC1Q9NRG0 131 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 PLA2G3Q9NZ20 509 aa11.73□□□□□ -0.53
HDAC3-204ENST00000469207 TTC7AQ9ULT0 858 aaPredicted RBP11.73□□□□□ -0.53
HDAC3-204ENST00000469207 POLEQ07864 2286 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 ARHGAP10A1A4S6 786 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 HEATR9A2RTY3 570 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 HYKKA2RU49 373 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 ENO4A6NNW6 628 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 KLHL41O60662 606 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 SLCO2B1O94956 709 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 C1orf105O95561 183 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 S1PR4O95977 384 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 CELA2AP08217 269 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 ZSCAN5DPP0CG00 497 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms