RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 NMRAL1Q9HBL8 299 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 KCNK4Q9NYG8 393 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 CPNE7Q9UBL6 633 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 ZNF839A8K0R7 811 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 TRIM49D1C9J1S8 452 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 SUV39H1O43463 412 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 SHBGP04278 402 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 ENO2P09104 434 aaPredicted RBP16.93■□□□□ 0.3
CPSF4-209ENST00000465132 THRAP10827 490 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 H2AFXP16104 143 aaPredicted RBP16.93■□□□□ 0.3
CPSF4-209ENST00000465132 MPSTP25325 297 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 HSD17B2P37059 387 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 HHEXQ03014 270 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 CLCA4Q14CN2 919 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 TSNAXIP1Q2TAA8 658 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 KRT71Q3SY84 523 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 ACSBG2Q5FVE4 666 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 CPNE9Q8IYJ1 553 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 IQCKQ8N0W5 287 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 GOLGA6L1Q8N7Z2 621 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 OR5K2Q8NHB8 316 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 MCOLN3Q8TDD5 553 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 RAD51AP1Q96B01 352 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 FAM136AQ96C01 138 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 LINGO1Q96FE5 620 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 FERD3LQ96RJ6 166 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 SLC38A3Q99624 504 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 OLFM1Q99784 485 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 DDA1Q9BW61 102 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 VIPAS39Q9H9C1 493 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 SNX15Q9NRS6 342 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 TMEM9Q9P0T7 183 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 SENP1Q9P0U3 644 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.93■□□□□ 0.3
CPSF4-209ENST00000465132 CDYLQ9Y232 598 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 MED16Q9Y2X0 877 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 B3GALT1Q9Y5Z6 326 aa16.93■□□□□ 0.3
CPSF4-209ENST00000465132 A0A096LPK6 155 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 CYSRT1A8MQ03 144 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 MATN4O95460 622 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 CCDC166P0CW27 439 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 ACADLP28330 430 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 PDHA2P29803 388 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 CSTF2P33240 577 aaKnown RBP eCLIP16.92■□□□□ 0.3
CPSF4-209ENST00000465132 EPHA4P54764 986 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 GPLD1P80108 840 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 ABRQ12979 859 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 BMPR2Q13873 1038 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 CASP8Q14790 479 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 UBAP2Q5T6F2 1119 aaKnown RBP16.92■□□□□ 0.3
CPSF4-209ENST00000465132 TMEM71Q6P5X7 295 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 ADAMTSL2Q86TH1 951 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 DCUN1D3Q8IWE4 304 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 FBXO15Q8NCQ5 510 aaPredicted RBP16.92■□□□□ 0.3
CPSF4-209ENST00000465132 ACVR1CQ8NER5 493 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 SLC37A2Q8TED4 501 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 EEF1AKMT1Q8WVE0 214 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 ISL2Q96A47 359 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 RMDN2Q96LZ7 410 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 INSM2Q96T92 566 aaPredicted RBP16.92■□□□□ 0.3
CPSF4-209ENST00000465132 DERL2Q9GZP9 239 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 SLC40A1Q9NP59 571 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 GEMIN8Q9NWZ8 242 aaKnown RBP16.92■□□□□ 0.3
CPSF4-209ENST00000465132 SLC39A1Q9NY26 324 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 CTNNAL1Q9UBT7 734 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 TBK1Q9UHD2 729 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 LGALS13Q9UHV8 139 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 LNPEPQ9UIQ6 1025 aa16.92■□□□□ 0.3
CPSF4-209ENST00000465132 NOVA2Q9UNW9 492 aaKnown RBP16.92■□□□□ 0.3
CPSF4-209ENST00000465132 SDK2Q58EX2 2172 aa16.91■□□□□ 0.3
CPSF4-209ENST00000465132 TRBV23OR9-2A0A075B6M9 112 aa16.91■□□□□ 0.3
CPSF4-209ENST00000465132 SMIM23A6NLE4 172 aa16.91■□□□□ 0.3
CPSF4-209ENST00000465132 B4E171 279 aa16.91■□□□□ 0.3
CPSF4-209ENST00000465132 RGS16O15492 202 aaPredicted RBP16.91■□□□□ 0.3
CPSF4-209ENST00000465132 F7P08709 466 aaPredicted RBP16.91■□□□□ 0.3
CPSF4-209ENST00000465132 LTA4HP09960 611 aaKnown RBP16.91■□□□□ 0.3
CPSF4-209ENST00000465132 BRAFP15056 766 aa16.91■□□□□ 0.3
CPSF4-209ENST00000465132 TSPAN7P41732 249 aa16.91■□□□□ 0.3
CPSF4-209ENST00000465132 SLCO1A2P46721 670 aa16.91■□□□□ 0.3
CPSF4-209ENST00000465132 CEP97Q8IW35 865 aa16.91■□□□□ 0.3
CPSF4-209ENST00000465132 IL22RA1Q8N6P7 574 aa16.91■□□□□ 0.3
CPSF4-209ENST00000465132 CFAP61Q8NHU2 1237 aa16.91■□□□□ 0.3
CPSF4-209ENST00000465132 GIMAP7Q8NHV1 300 aa16.91■□□□□ 0.3
CPSF4-209ENST00000465132 EPS8L3Q8TE67 593 aaKnown RBP16.91■□□□□ 0.3
CPSF4-209ENST00000465132 ASB11Q8WXH4 323 aa16.91■□□□□ 0.3
CPSF4-209ENST00000465132 ASPSCR1Q9BZE9 553 aa16.91■□□□□ 0.3
CPSF4-209ENST00000465132 SLC25A18Q9H1K4 315 aa16.91■□□□□ 0.3
CPSF4-209ENST00000465132 VPS11Q9H270 941 aa16.91■□□□□ 0.3
CPSF4-209ENST00000465132 KIR3DX1Q9H7L2 352 aa16.91■□□□□ 0.3
CPSF4-209ENST00000465132 CAB39LQ9H9S4 337 aa16.91■□□□□ 0.3
CPSF4-209ENST00000465132 OCIAD1Q9NX40 245 aa16.91■□□□□ 0.3
CPSF4-209ENST00000465132 PDP2Q9P2J9 529 aa16.91■□□□□ 0.3
CPSF4-209ENST00000465132 WDR37Q9Y2I8 494 aa16.91■□□□□ 0.3
CPSF4-209ENST00000465132 LILRA5A6NI73 299 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 OR52A4PA6NMU1 304 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 EFCAB7A8K855 629 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 SYCE1LA8MT33 242 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 MATN2O00339 956 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 PSIP1O75475 530 aaKnown RBP16.9■□□□□ 0.3
CPSF4-209ENST00000465132 ALDOAP04075 364 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms