RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 TRPC1P48995 793 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 TCEA2Q15560 299 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 ARHGAP15Q53QZ3 475 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 NHSL2Q5HYW2 709 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 CCDC149Q6ZUS6 474 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 PIWIL3Q7Z3Z3 882 aaKnown RBP15.04■□□□□ -0
LMNB1-203ENST00000460265 DHRSXQ8N5I4 330 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 OVCA2Q8WZ82 227 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 TMEM159Q96B96 161 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 ZNF486Q96H40 463 aaPredicted RBP15.04■□□□□ -0
LMNB1-203ENST00000460265 GREB1Q4ZG55 1949 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 E2F3O00716 465 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 CD160O95971 181 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 CLTBP09497 229 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 NSG1P42857 185 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 CASP9P55211 416 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 OR4D2P58180 307 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 NUMA1Q14980 2115 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 ARSIQ5FYB1 569 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 ATAD3BQ5T9A4 648 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 ABRAXAS1Q6UWZ7 409 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 SLC22A16Q86VW1 577 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 ANKRD13BQ86YJ7 626 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 SYTL1Q8IYJ3 562 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 NXPE1Q8N323 547 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 OR2T12Q8NG77 320 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 FBXL20Q96IG2 436 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 TMEM9Q9P0T7 183 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 TMEM181Q9P2C4 612 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 F11P03951 625 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 PHC1P78364 1004 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 MERTKQ12866 999 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 LAPTM5Q13571 262 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 INAVAQ3KP66 663 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 UBE2UQ5VVX9 321 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 SERPINA13PQ6UXR4 307 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 Q6ZSR9 355 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 KLHDC8BQ8IXV7 354 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 RNF175Q8N4F7 328 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 SLC43A3Q8NBI5 491 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 SH3YL1Q96HL8 342 aaPredicted RBP15.03■□□□□ -0
LMNB1-203ENST00000460265 ZNF385DQ9H6B1 395 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 AIG1Q9NVV5 245 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 DUS2Q9NX74 493 aaKnown RBP15.03■□□□□ -0
LMNB1-203ENST00000460265 SH3BP4Q9P0V3 963 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 GPR45Q9Y5Y3 372 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 GNG14A0A1W2PPG7 69 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 DFNA5O60443 496 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 MAN1A2O60476 641 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 MFN2O95140 757 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 KRT8P05787 483 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 HLA-FP30511 346 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 MAPK8P45983 427 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 POLR2LP62875 67 aaKnown RBP15.03■□□□□ -0
LMNB1-203ENST00000460265 NFKB2Q00653 900 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 TRAP1Q12931 704 aaKnown RBP15.03■□□□□ -0
LMNB1-203ENST00000460265 BNIP2Q12982 314 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 SETMARQ53H47 684 aaPredicted RBP15.03■□□□□ -0
LMNB1-203ENST00000460265 TTC23LQ6PF05 361 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 CRTC1Q6UUV9 634 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 PRR23BQ6ZRT6 265 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 COQ7Q99807 217 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 PSD2Q9BQI7 771 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 BDH2Q9BUT1 245 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 C9orf16Q9BUW7 83 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 FAM83DQ9H4H8 585 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 DDX28Q9NUL7 540 aaKnown RBP15.03■□□□□ -0
LMNB1-203ENST00000460265 ADGRE2Q9UHX3 823 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 ZNF225Q9UK10 706 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 PIKFYVEQ9Y2I7 2098 aa15.03■□□□□ -0
LMNB1-203ENST00000460265 CCRL2O00421 344 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 ATXN8OSP0DMR3 200 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 SRCP12931 536 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 TYRP14679 529 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 CA5AP35218 305 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 MLLT10P55197 1068 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 MRPS15P82914 257 aaKnown RBP15.02■□□□□ -0
LMNB1-203ENST00000460265 PTCHD3Q3KNS1 767 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 FAM98BQ52LJ0 330 aaKnown RBP15.02■□□□□ -0
LMNB1-203ENST00000460265 RSBN1Q5VWQ0 802 aaPredicted RBP15.02■□□□□ -0
LMNB1-203ENST00000460265 SPESP1Q6UW49 350 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 BPHLQ86WA6 291 aaPredicted RBP15.02■□□□□ -0
LMNB1-203ENST00000460265 TRAPPC5Q8IUR0 188 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 DOK1Q99704 481 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 ACAT2Q9BWD1 397 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 NUSAP1Q9BXS6 441 aaKnown RBP15.02■□□□□ -0
LMNB1-203ENST00000460265 EMILIN2Q9BXX0 1053 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 MOV10Q9HCE1 1003 aaKnown RBP15.02■□□□□ -0
LMNB1-203ENST00000460265 KCTD5Q9NXV2 234 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 GPSM3Q9Y4H4 160 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 NYNRINQ9P2P1 1898 aaKnown RBP15.02■□□□□ -0
LMNB1-203ENST00000460265 ZSCAN5BA6NJL1 495 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 SNPHO15079 494 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 IDH3BO43837 385 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 LZTS3O60299 673 aaPredicted RBP15.02■□□□□ -0
LMNB1-203ENST00000460265 CLDN9O95484 217 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 POP4O95707 220 aaKnown RBP15.02■□□□□ -0
LMNB1-203ENST00000460265 PPM1AP35813 382 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 CLCN7P51798 805 aa15.02■□□□□ -0
LMNB1-203ENST00000460265 NAE1Q13564 534 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms