RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 LINC00597Q9H2U6 94 aa17.66■□□□□ 0.42
HPS3-202ENST00000460120 KAT8Q9H7Z6 458 aaKnown RBP17.66■□□□□ 0.42
HPS3-202ENST00000460120 MYO1GB0I1T2 1018 aa17.66■□□□□ 0.42
HPS3-202ENST00000460120 MATN1P21941 496 aa17.66■□□□□ 0.42
HPS3-202ENST00000460120 MAPK8P45983 427 aa17.66■□□□□ 0.42
HPS3-202ENST00000460120 PREPP48147 710 aa17.66■□□□□ 0.42
HPS3-202ENST00000460120 CHIT1Q13231 466 aa17.66■□□□□ 0.42
HPS3-202ENST00000460120 C16orf72Q14CZ0 275 aa17.66■□□□□ 0.42
HPS3-202ENST00000460120 XKR5Q6UX68 686 aa17.66■□□□□ 0.42
HPS3-202ENST00000460120 HTR3DQ70Z44 454 aa17.66■□□□□ 0.42
HPS3-202ENST00000460120 CYP2U1Q7Z449 544 aa17.66■□□□□ 0.42
HPS3-202ENST00000460120 TIMMDC1Q9NPL8 285 aa17.66■□□□□ 0.42
HPS3-202ENST00000460120 hCG_2039718K7EN88 272 aa17.65■□□□□ 0.42
HPS3-202ENST00000460120 AOAHP28039 575 aa17.65■□□□□ 0.42
HPS3-202ENST00000460120 KCNAB2Q13303 367 aa17.65■□□□□ 0.42
HPS3-202ENST00000460120 CCSMST1Q4G0I0 132 aa17.65■□□□□ 0.42
HPS3-202ENST00000460120 C8orf59Q8N0T1 100 aaPredicted RBP17.65■□□□□ 0.42
HPS3-202ENST00000460120 PARP8Q8N3A8 854 aa17.65■□□□□ 0.42
HPS3-202ENST00000460120 THAP11Q96EK4 314 aa17.65■□□□□ 0.42
HPS3-202ENST00000460120 DTNBP1Q96EV8 351 aa17.65■□□□□ 0.42
HPS3-202ENST00000460120 MBOAT4Q96T53 435 aa17.65■□□□□ 0.42
HPS3-202ENST00000460120 PCDH12Q9NPG4 1184 aa17.65■□□□□ 0.42
HPS3-202ENST00000460120 SERHLQ9NQF3 203 aa17.65■□□□□ 0.42
HPS3-202ENST00000460120 TMEM39AQ9NV64 488 aa17.65■□□□□ 0.42
HPS3-202ENST00000460120 FAM118AQ9NWS6 357 aa17.65■□□□□ 0.42
HPS3-202ENST00000460120 TUBA8Q9NY65 449 aaPredicted RBP17.65■□□□□ 0.42
HPS3-202ENST00000460120 DNAJB9Q9UBS3 223 aa17.65■□□□□ 0.42
HPS3-202ENST00000460120 NUP214P35658 2090 aaPredicted RBP17.65■□□□□ 0.42
HPS3-202ENST00000460120 RFXANKO14593 260 aa17.65■□□□□ 0.42
HPS3-202ENST00000460120 SLC39A5Q6ZMH5 540 aa17.65■□□□□ 0.42
HPS3-202ENST00000460120 OTOP2Q7RTS6 562 aa17.65■□□□□ 0.42
HPS3-202ENST00000460120 ZNF551Q7Z340 670 aaPredicted RBP17.65■□□□□ 0.42
HPS3-202ENST00000460120 HSD11B1LQ7Z5J1 315 aa17.65■□□□□ 0.42
HPS3-202ENST00000460120 GORASP2Q9H8Y8 452 aa17.65■□□□□ 0.42
HPS3-202ENST00000460120 VNN3Q9NY84 501 aa17.65■□□□□ 0.42
HPS3-202ENST00000460120 SNX6Q9UNH7 406 aa17.65■□□□□ 0.42
HPS3-202ENST00000460120 MYO7AQ13402 2215 aa17.64■□□□□ 0.42
HPS3-202ENST00000460120 TFPTP0C1Z6 253 aa17.64■□□□□ 0.42
HPS3-202ENST00000460120 ATP1B2P14415 290 aaPredicted RBP17.64■□□□□ 0.42
HPS3-202ENST00000460120 CSF2RAP15509 400 aa17.64■□□□□ 0.42
HPS3-202ENST00000460120 SPINT3P49223 89 aa17.64■□□□□ 0.42
HPS3-202ENST00000460120 BNIP3Q12983 259 aa17.64■□□□□ 0.42
HPS3-202ENST00000460120 TBC1D25Q3MII6 688 aa17.64■□□□□ 0.42
HPS3-202ENST00000460120 CARD16Q5EG05 197 aa17.64■□□□□ 0.42
HPS3-202ENST00000460120 ZCCHC8Q6NZY4 707 aaKnown RBP17.64■□□□□ 0.42
HPS3-202ENST00000460120 ZNF621Q6ZSS3 439 aa17.64■□□□□ 0.42
HPS3-202ENST00000460120 RBM23Q86U06 439 aaKnown RBP17.64■□□□□ 0.42
HPS3-202ENST00000460120 TMC8Q8IU68 726 aa17.64■□□□□ 0.42
HPS3-202ENST00000460120 TMEM132CQ8N3T6 1108 aa17.64■□□□□ 0.42
HPS3-202ENST00000460120 GLB1L3Q8NCI6 653 aaPredicted RBP17.64■□□□□ 0.42
HPS3-202ENST00000460120 ZNF555Q8NEP9 628 aa17.64■□□□□ 0.42
HPS3-202ENST00000460120 UBTD2Q8WUN7 234 aa17.64■□□□□ 0.42
HPS3-202ENST00000460120 HHIPL1Q96JK4 782 aa17.64■□□□□ 0.42
HPS3-202ENST00000460120 FAM210AQ96ND0 272 aa17.64■□□□□ 0.42
HPS3-202ENST00000460120 SLC25A13Q9UJS0 675 aa17.64■□□□□ 0.42
HPS3-202ENST00000460120 UNC80Q8N2C7 3258 aa17.64■□□□□ 0.41
HPS3-202ENST00000460120 PER2O15055 1255 aa17.64■□□□□ 0.41
HPS3-202ENST00000460120 RFPL2O75678 378 aa17.64■□□□□ 0.41
HPS3-202ENST00000460120 CTU2Q2VPK5 515 aaKnown RBP17.64■□□□□ 0.41
HPS3-202ENST00000460120 ANKDD1AQ495B1 522 aa17.64■□□□□ 0.41
HPS3-202ENST00000460120 CNKSR3Q6P9H4 555 aa17.64■□□□□ 0.41
HPS3-202ENST00000460120 THAP5Q7Z6K1 395 aa17.64■□□□□ 0.41
HPS3-202ENST00000460120 DDX53Q86TM3 631 aaKnown RBP17.64■□□□□ 0.41
HPS3-202ENST00000460120 SYT12Q8IV01 421 aa17.64■□□□□ 0.41
HPS3-202ENST00000460120 CLECL1Q8IZS7 167 aa17.64■□□□□ 0.41
HPS3-202ENST00000460120 CPPED1Q9BRF8 314 aaPredicted RBP17.64■□□□□ 0.41
HPS3-202ENST00000460120 RDH14Q9HBH5 336 aa17.64■□□□□ 0.41
HPS3-202ENST00000460120 WARS2Q9UGM6 360 aaKnown RBP17.64■□□□□ 0.41
HPS3-202ENST00000460120 GRXCR2A6NFK2 248 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 PFDN1O60925 122 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 FKTNO75072 461 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 C7P10643 843 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 ZNF182P17025 639 aaPredicted RBP17.63■□□□□ 0.41
HPS3-202ENST00000460120 HLCSP50747 726 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 XKR6Q5GH73 641 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 FAM217AQ8IXS0 508 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 CBARPQ8N350 705 aaPredicted RBP17.63■□□□□ 0.41
HPS3-202ENST00000460120 GPR156Q8NFN8 814 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 ASB11Q8WXH4 323 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 CCDC115Q96NT0 180 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 PANX1Q96RD7 426 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 C16orf96A6NNT2 1141 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 ITGB8P26012 769 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 AQP1P29972 269 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 EMP3P54852 163 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 CLDN8P56748 225 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 IRF8Q02556 426 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 SIM2Q14190 667 aaPredicted RBP17.63■□□□□ 0.41
HPS3-202ENST00000460120 PRR23BQ6ZRT6 265 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 CNIH3Q8TBE1 160 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 SH3GL1Q99961 368 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 SLC12A9Q9BXP2 914 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 REXO4Q9GZR2 422 aaKnown RBP17.63■□□□□ 0.41
HPS3-202ENST00000460120 DCAF13Q9NV06 445 aaKnown RBP17.63■□□□□ 0.41
HPS3-202ENST00000460120 GALNT8Q9NY28 637 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 ABCG2Q9UNQ0 655 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 A0A0J9YVX5 310 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 TTC34A8MYJ7 566 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 E7EQ34 232 aa17.63■□□□□ 0.41
HPS3-202ENST00000460120 FGF18O76093 207 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms