RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 AGXTP21549 392 aa15.51■□□□□ 0.07
COL7A1-203ENST00000459756 DHX9Q08211 1270 aaKnown RBP15.51■□□□□ 0.07
COL7A1-203ENST00000459756 CYP2A13Q16696 494 aa15.51■□□□□ 0.07
COL7A1-203ENST00000459756 KLHL38Q2WGJ6 581 aa15.51■□□□□ 0.07
COL7A1-203ENST00000459756 CCSMST1Q4G0I0 132 aa15.51■□□□□ 0.07
COL7A1-203ENST00000459756 SPANXN3Q5MJ09 141 aa15.51■□□□□ 0.07
COL7A1-203ENST00000459756 ZNF549Q6P9A3 640 aa15.51■□□□□ 0.07
COL7A1-203ENST00000459756 TAX1BP1Q86VP1 789 aa15.51■□□□□ 0.07
COL7A1-203ENST00000459756 FAM20CQ8IXL6 584 aa15.51■□□□□ 0.07
COL7A1-203ENST00000459756 PDIK1LQ8N165 341 aa15.51■□□□□ 0.07
COL7A1-203ENST00000459756 ENDOVQ8N8Q3 282 aaKnown RBP15.51■□□□□ 0.07
COL7A1-203ENST00000459756 THAP4Q8WY91 577 aa15.51■□□□□ 0.07
COL7A1-203ENST00000459756 SPRTNQ9H040 489 aaPredicted RBP15.51■□□□□ 0.07
COL7A1-203ENST00000459756 EURLQ9NYK6 297 aa15.51■□□□□ 0.07
COL7A1-203ENST00000459756 SRPK3Q9UPE1 567 aa15.51■□□□□ 0.07
COL7A1-203ENST00000459756 HEMK1Q9Y5R4 338 aaPredicted RBP15.51■□□□□ 0.07
COL7A1-203ENST00000459756 SEC16AO15027 2179 aa15.51■□□□□ 0.07
COL7A1-203ENST00000459756 TARM1B6A8C7 271 aa15.5■□□□□ 0.07
COL7A1-203ENST00000459756 C9J4A7 227 aa15.5■□□□□ 0.07
COL7A1-203ENST00000459756 PSIP1O75475 530 aaKnown RBP15.5■□□□□ 0.07
COL7A1-203ENST00000459756 CATP04040 527 aaKnown RBP15.5■□□□□ 0.07
COL7A1-203ENST00000459756 ENO3P13929 434 aaPredicted RBP15.5■□□□□ 0.07
COL7A1-203ENST00000459756 RPS18P62269 152 aaKnown RBP15.5■□□□□ 0.07
COL7A1-203ENST00000459756 PTCHD3Q3KNS1 767 aa15.5■□□□□ 0.07
COL7A1-203ENST00000459756 BBS9Q3SYG4 887 aa15.5■□□□□ 0.07
COL7A1-203ENST00000459756 MSS51Q4VC12 460 aa15.5■□□□□ 0.07
COL7A1-203ENST00000459756 ZC3H12BQ5HYM0 836 aaKnown RBP15.5■□□□□ 0.07
COL7A1-203ENST00000459756 ZNF385CQ66K41 422 aaPredicted RBP15.5■□□□□ 0.07
COL7A1-203ENST00000459756 LCN10Q6JVE6 187 aa15.5■□□□□ 0.07
COL7A1-203ENST00000459756 RHBDD2Q6NTF9 364 aa15.5■□□□□ 0.07
COL7A1-203ENST00000459756 FIGLAQ6QHK4 219 aa15.5■□□□□ 0.07
COL7A1-203ENST00000459756 FAM198BQ6UWH4 519 aa15.5■□□□□ 0.07
COL7A1-203ENST00000459756 MCATQ8IVS2 390 aaKnown RBP15.5■□□□□ 0.07
COL7A1-203ENST00000459756 C2CD4AQ8NCU7 369 aaPredicted RBP15.5■□□□□ 0.07
COL7A1-203ENST00000459756 OR9A1PQ8NGU1 263 aa15.5■□□□□ 0.07
COL7A1-203ENST00000459756 C9orf43Q8TAL5 461 aaPredicted RBP15.5■□□□□ 0.07
COL7A1-203ENST00000459756 PROKR1Q8TCW9 393 aa15.5■□□□□ 0.07
COL7A1-203ENST00000459756 DENND1AQ8TEH3 1009 aa15.5■□□□□ 0.07
COL7A1-203ENST00000459756 INPP5DQ92835 1189 aa15.5■□□□□ 0.07
COL7A1-203ENST00000459756 ZUFSPQ96AP4 578 aa15.5■□□□□ 0.07
COL7A1-203ENST00000459756 C16orf45Q96MC5 204 aaPredicted RBP15.5■□□□□ 0.07
COL7A1-203ENST00000459756 SLC30A3Q99726 388 aa15.5■□□□□ 0.07
COL7A1-203ENST00000459756 C17orf62Q9BQA9 187 aa15.5■□□□□ 0.07
COL7A1-203ENST00000459756 IARS2Q9NSE4 1012 aaKnown RBP15.5■□□□□ 0.07
COL7A1-203ENST00000459756 IRAK4Q9NWZ3 460 aa15.5■□□□□ 0.07
COL7A1-203ENST00000459756 TCFL5Q9UL49 500 aa15.5■□□□□ 0.07
COL7A1-203ENST00000459756 SNX7Q9UNH6 387 aa15.5■□□□□ 0.07
COL7A1-203ENST00000459756 MAN2B2Q9Y2E5 1009 aa15.5■□□□□ 0.07
COL7A1-203ENST00000459756 KLHL20Q9Y2M5 609 aa15.5■□□□□ 0.07
COL7A1-203ENST00000459756 MED16Q9Y2X0 877 aa15.5■□□□□ 0.07
COL7A1-203ENST00000459756 DHRS7Q9Y394 339 aa15.5■□□□□ 0.07
COL7A1-203ENST00000459756 KLK4Q9Y5K2 254 aa15.5■□□□□ 0.07
COL7A1-203ENST00000459756 KRT87PA6NCN2 255 aa15.49■□□□□ 0.07
COL7A1-203ENST00000459756 ARHGEF33A8MVX0 844 aa15.49■□□□□ 0.07
COL7A1-203ENST00000459756 MYO1CO00159 1063 aa15.49■□□□□ 0.07
COL7A1-203ENST00000459756 BANF1O75531 89 aa15.49■□□□□ 0.07
COL7A1-203ENST00000459756 HAUS5O94927 633 aa15.49■□□□□ 0.07
COL7A1-203ENST00000459756 CAPN1P07384 714 aa15.49■□□□□ 0.07
COL7A1-203ENST00000459756 F7P08709 466 aaPredicted RBP15.49■□□□□ 0.07
COL7A1-203ENST00000459756 CBSLP0DN79 551 aa15.49■□□□□ 0.07
COL7A1-203ENST00000459756 ERVK-10P10266 1014 aa15.49■□□□□ 0.07
COL7A1-203ENST00000459756 CASQ1P31415 396 aa15.49■□□□□ 0.07
COL7A1-203ENST00000459756 CBSP35520 551 aa15.49■□□□□ 0.07
COL7A1-203ENST00000459756 HSD17B2P37059 387 aa15.49■□□□□ 0.07
COL7A1-203ENST00000459756 PMS2P54278 862 aa15.49■□□□□ 0.07
COL7A1-203ENST00000459756 MPP1Q00013 466 aa15.49■□□□□ 0.07
COL7A1-203ENST00000459756 ARHGAP19Q14CB8 494 aa15.49■□□□□ 0.07
COL7A1-203ENST00000459756 NCF4Q15080 339 aa15.49■□□□□ 0.07
COL7A1-203ENST00000459756 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.49■□□□□ 0.07
COL7A1-203ENST00000459756 FCRL6Q6DN72 434 aa15.49■□□□□ 0.07
COL7A1-203ENST00000459756 SYT10Q6XYQ8 523 aa15.49■□□□□ 0.07
COL7A1-203ENST00000459756 APLFQ8IW19 511 aaPredicted RBP15.49■□□□□ 0.07
COL7A1-203ENST00000459756 ZNF655Q8N720 491 aaPredicted RBP15.49■□□□□ 0.07
COL7A1-203ENST00000459756 FBXO15Q8NCQ5 510 aaPredicted RBP15.49■□□□□ 0.07
COL7A1-203ENST00000459756 OR2L3Q8NG85 312 aa15.49■□□□□ 0.07
COL7A1-203ENST00000459756 OR2A1Q8NGT9 310 aa15.49■□□□□ 0.07
COL7A1-203ENST00000459756 GIMAP7Q8NHV1 300 aa15.49■□□□□ 0.07
COL7A1-203ENST00000459756 GPR21Q99679 349 aa15.49■□□□□ 0.07
COL7A1-203ENST00000459756 AARSD1Q9BTE6 412 aaKnown RBP15.49■□□□□ 0.07
COL7A1-203ENST00000459756 NDC1Q9BTX1 674 aa15.49■□□□□ 0.07
COL7A1-203ENST00000459756 DHRS4Q9BTZ2 278 aa15.49■□□□□ 0.07
COL7A1-203ENST00000459756 PADI2Q9Y2J8 665 aa15.49■□□□□ 0.07
COL7A1-203ENST00000459756 ZNF839A8K0R7 811 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 MKRN2OSH3BPM6 223 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 EIF3FO00303 357 aaPredicted RBP15.48■□□□□ 0.07
COL7A1-203ENST00000459756 FANCGO15287 622 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 TTI1O43156 1089 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 SLC28A2O43868 658 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 VPS26AO75436 327 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 RFPL1O75677 317 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 CTSBP07858 339 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 CD63P08962 238 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 MPC1LP0DKB6 136 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 ERGP11308 486 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 GRIA3P42263 894 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 CUL1Q13616 776 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 IL10RAQ13651 578 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 NAA25Q14CX7 972 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 HIF1AQ16665 826 aa15.48■□□□□ 0.07
COL7A1-203ENST00000459756 TCTE1Q5JU00 501 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms