RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 IRF8Q02556 426 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 ABRAXAS2Q15018 415 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 DUS1LQ6P1R4 473 aaKnown RBP23.67■■□□□ 1.38
U2AF1-204ENST00000459639 SCIMPQ6UWF3 145 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 MAMSTRQ6ZN01 415 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 RD3Q7Z3Z2 195 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 RGL4Q8IZJ4 473 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 OR2T11Q8NH01 316 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 MIPEPQ99797 713 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 MVB12BQ9H7P6 319 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 CD320Q9NPF0 282 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 PNMA8BQ9ULN7 279 aaPredicted RBP23.67■■□□□ 1.38
U2AF1-204ENST00000459639 SNX6Q9UNH7 406 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 KCNE2Q9Y6J6 123 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 FANCMQ8IYD8 2048 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 SCAMP1O15126 338 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 PRAMEF4O60810 478 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 THEGLP0DJG4 465 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 JUPP14923 745 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 CD27P26842 260 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 PTPN4P29074 926 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 CLCA4Q14CN2 919 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 PRAMEF9Q5VWM5 478 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 SPATA19Q7Z5L4 167 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 FERD3LQ96RJ6 166 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 PRDM8Q9NQV8 689 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 IMP3Q9NV31 184 aaKnown RBP23.67■■□□□ 1.38
U2AF1-204ENST00000459639 PLAGL1Q9UM63 463 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 HEBP2Q9Y5Z4 205 aa23.67■■□□□ 1.38
U2AF1-204ENST00000459639 TRIOO75962 3097 aa23.66■■□□□ 1.38
U2AF1-204ENST00000459639 CFAP73A6NFT4 308 aa23.66■■□□□ 1.38
U2AF1-204ENST00000459639 E7EQ34 232 aa23.66■■□□□ 1.38
U2AF1-204ENST00000459639 SLC28A1O00337 649 aa23.66■■□□□ 1.38
U2AF1-204ENST00000459639 AXIN1O15169 862 aa23.66■■□□□ 1.38
U2AF1-204ENST00000459639 PI15O43692 258 aa23.66■■□□□ 1.38
U2AF1-204ENST00000459639 RASGRP1O95267 797 aa23.66■■□□□ 1.38
U2AF1-204ENST00000459639 ALDOCP09972 364 aaKnown RBP23.66■■□□□ 1.38
U2AF1-204ENST00000459639 GNAZP19086 355 aa23.66■■□□□ 1.38
U2AF1-204ENST00000459639 MNAT1P51948 309 aa23.66■■□□□ 1.38
U2AF1-204ENST00000459639 PRKG2Q13237 762 aa23.66■■□□□ 1.38
U2AF1-204ENST00000459639 E2F2Q14209 437 aa23.66■■□□□ 1.38
U2AF1-204ENST00000459639 HERC3Q15034 1050 aa23.66■■□□□ 1.38
U2AF1-204ENST00000459639 CPSF6Q16630 551 aaKnown RBP eCLIP23.66■■□□□ 1.38
U2AF1-204ENST00000459639 CYP2A13Q16696 494 aa23.66■■□□□ 1.38
U2AF1-204ENST00000459639 XKR6Q5GH73 641 aa23.66■■□□□ 1.38
U2AF1-204ENST00000459639 ABRAXAS1Q6UWZ7 409 aa23.66■■□□□ 1.38
U2AF1-204ENST00000459639 Q6ZSR9 355 aa23.66■■□□□ 1.38
U2AF1-204ENST00000459639 TRIM46Q7Z4K8 759 aa23.66■■□□□ 1.38
U2AF1-204ENST00000459639 HID1Q8IV36 788 aa23.66■■□□□ 1.38
U2AF1-204ENST00000459639 RAB42Q8N4Z0 105 aa23.66■■□□□ 1.38
U2AF1-204ENST00000459639 SETD7Q8WTS6 366 aaKnown RBP23.66■■□□□ 1.38
U2AF1-204ENST00000459639 SLC6A18Q96N87 628 aa23.66■■□□□ 1.38
U2AF1-204ENST00000459639 MENTQ9BUN1 341 aa23.66■■□□□ 1.38
U2AF1-204ENST00000459639 GIMAP2Q9UG22 337 aa23.66■■□□□ 1.38
U2AF1-204ENST00000459639 PCOLCE2Q9UKZ9 415 aa23.66■■□□□ 1.38
U2AF1-204ENST00000459639 ZNF490Q9ULM2 529 aaPredicted RBP23.66■■□□□ 1.38
U2AF1-204ENST00000459639 DYRK1BQ9Y463 629 aa23.66■■□□□ 1.38
U2AF1-204ENST00000459639 SPTY2D1-AS1A0A0U1RR47 76 aa23.65■■□□□ 1.38
U2AF1-204ENST00000459639 TNFP01375 233 aa23.65■■□□□ 1.38
U2AF1-204ENST00000459639 MTHFD1P11586 935 aaKnown RBP23.65■■□□□ 1.38
U2AF1-204ENST00000459639 HNF4AP41235 474 aa23.65■■□□□ 1.38
U2AF1-204ENST00000459639 CASP2P42575 452 aa23.65■■□□□ 1.38
U2AF1-204ENST00000459639 STX1BP61266 288 aa23.65■■□□□ 1.38
U2AF1-204ENST00000459639 ZNF33BQ06732 778 aa23.65■■□□□ 1.38
U2AF1-204ENST00000459639 FASTKQ14296 549 aaKnown RBP23.65■■□□□ 1.38
U2AF1-204ENST00000459639 ZRSR2Q15696 482 aaKnown RBP23.65■■□□□ 1.38
U2AF1-204ENST00000459639 ATP6AP1LQ52LC2 224 aa23.65■■□□□ 1.38
U2AF1-204ENST00000459639 GRHL2Q6ISB3 625 aa23.65■■□□□ 1.38
U2AF1-204ENST00000459639 SLC36A4Q6YBV0 504 aa23.65■■□□□ 1.38
U2AF1-204ENST00000459639 DCP2Q8IU60 420 aaKnown RBP23.65■■□□□ 1.38
U2AF1-204ENST00000459639 KLHDC7BQ96G42 594 aa23.65■■□□□ 1.38
U2AF1-204ENST00000459639 IL17FQ96PD4 163 aa23.65■■□□□ 1.38
U2AF1-204ENST00000459639 RAB11FIP5Q9BXF6 653 aa23.65■■□□□ 1.38
U2AF1-204ENST00000459639 TMEM168Q9H0V1 697 aa23.65■■□□□ 1.38
U2AF1-204ENST00000459639 AASDHPPTQ9NRN7 309 aa23.65■■□□□ 1.38
U2AF1-204ENST00000459639 CCL27Q9Y4X3 112 aa23.65■■□□□ 1.38
U2AF1-204ENST00000459639 RGS14O43566 566 aa23.64■■□□□ 1.38
U2AF1-204ENST00000459639 PEX11AO75192 247 aa23.64■■□□□ 1.38
U2AF1-204ENST00000459639 COX4I1P13073 169 aa23.64■■□□□ 1.38
U2AF1-204ENST00000459639 NPPBP16860 134 aa23.64■■□□□ 1.38
U2AF1-204ENST00000459639 AK4P27144 223 aaPredicted RBP23.64■■□□□ 1.38
U2AF1-204ENST00000459639 ERVK-8P63133 956 aa23.64■■□□□ 1.38
U2AF1-204ENST00000459639 RPL6Q02878 288 aaKnown RBP23.64■■□□□ 1.38
U2AF1-204ENST00000459639 DOC2AQ14183 400 aa23.64■■□□□ 1.38
U2AF1-204ENST00000459639 RPE65Q16518 533 aa23.64■■□□□ 1.38
U2AF1-204ENST00000459639 GSTA3Q16772 222 aa23.64■■□□□ 1.38
U2AF1-204ENST00000459639 USP39Q53GS9 565 aaKnown RBP23.64■■□□□ 1.38
U2AF1-204ENST00000459639 LCTLQ6UWM7 567 aa23.64■■□□□ 1.38
U2AF1-204ENST00000459639 SFRP1Q8N474 314 aa23.64■■□□□ 1.38
U2AF1-204ENST00000459639 PPP3R2Q96LZ3 170 aa23.64■■□□□ 1.38
U2AF1-204ENST00000459639 ELOVL6Q9H5J4 265 aa23.64■■□□□ 1.38
U2AF1-204ENST00000459639 DLGAP2Q9P1A6 1054 aa23.64■■□□□ 1.38
U2AF1-204ENST00000459639 TBC1D29Q9UFV1 150 aa23.64■■□□□ 1.38
U2AF1-204ENST00000459639 INVSQ9Y283 1065 aa23.64■■□□□ 1.38
U2AF1-204ENST00000459639 PCM1Q15154 2024 aa23.64■■□□□ 1.37
U2AF1-204ENST00000459639 SERTM1A2A2V5 107 aa23.64■■□□□ 1.37
U2AF1-204ENST00000459639 LSM1O15116 133 aaKnown RBP23.64■■□□□ 1.37
U2AF1-204ENST00000459639 THRAP10827 490 aa23.64■■□□□ 1.37
U2AF1-204ENST00000459639 ACTR1BP42025 376 aa23.64■■□□□ 1.37
U2AF1-204ENST00000459639 CPA2P48052 419 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms