RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 RASGEF1CQ8N431 466 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 ZBTB2Q8N680 514 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 LMNTD1Q8N9Z9 388 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 LPGAT1Q92604 370 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 DLG3Q92796 817 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 FAM136AQ96C01 138 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 MS4A14Q96JA4 679 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 IP6K3Q96PC2 410 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 GBP5Q96PP8 586 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 RUVBL2Q9Y230 463 aaKnown RBP12.39□□□□□ -0.43
CHD3-206ENST00000452447 VPS9D1Q9Y2B5 631 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 PTRH2Q9Y3E5 179 aaKnown RBP12.39□□□□□ -0.43
CHD3-206ENST00000452447 NFS1Q9Y697 457 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 ESPL1Q14674 2120 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 SDR42E2A6NKP2 422 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 ZNF185O15231 689 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 NIPSNAP2O75323 286 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 KLF7O75840 302 aaPredicted RBP12.39□□□□□ -0.43
CHD3-206ENST00000452447 FKBP9O95302 570 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 OGNP20774 298 aaKnown RBP12.39□□□□□ -0.43
CHD3-206ENST00000452447 COILP38432 576 aaPredicted RBP12.39□□□□□ -0.43
CHD3-206ENST00000452447 FOLR3P41439 243 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 GRIA3P42263 894 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 BDKRB1P46663 353 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 ARSFP54793 590 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 MLLT10P55197 1068 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 ADARP55265 1226 aaKnown RBP12.39□□□□□ -0.43
CHD3-206ENST00000452447 SPTBN1Q01082 2364 aaKnown RBP12.39□□□□□ -0.43
CHD3-206ENST00000452447 ATP1A4Q13733 1029 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 DHX34Q14147 1143 aaKnown RBP12.39□□□□□ -0.43
CHD3-206ENST00000452447 NKAIN1Q4KMZ8 207 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 NEPROQ6NW34 567 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 TTC27Q6P3X3 843 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 FIGLAQ6QHK4 219 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 ZUFSPQ96AP4 578 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 XAB2Q9HCS7 855 aaKnown RBP12.39□□□□□ -0.43
CHD3-206ENST00000452447 MLXIPLQ9NP71 852 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 TSR3Q9UJK0 312 aaKnown RBP12.39□□□□□ -0.43
CHD3-206ENST00000452447 ZNF451Q9Y4E5 1061 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 NAV2Q8IVL1 2488 aa12.38□□□□□ -0.43
CHD3-206ENST00000452447 MDC1Q14676 2089 aaKnown RBP12.38□□□□□ -0.43
CHD3-206ENST00000452447 FAM237BA0A1B0GVD1 139 aa12.38□□□□□ -0.43
CHD3-206ENST00000452447 CTAGE9A4FU28 777 aa12.38□□□□□ -0.43
CHD3-206ENST00000452447 A6NL46 340 aa12.38□□□□□ -0.43
CHD3-206ENST00000452447 TTLL8A6PVC2 850 aa12.38□□□□□ -0.43
CHD3-206ENST00000452447 GOLGA8MH3BSY2 632 aa12.38□□□□□ -0.43
CHD3-206ENST00000452447 PGRMC1O00264 195 aaKnown RBP12.38□□□□□ -0.43
CHD3-206ENST00000452447 PEX12O00623 359 aa12.38□□□□□ -0.43
CHD3-206ENST00000452447 MLNP12872 115 aa12.38□□□□□ -0.43
CHD3-206ENST00000452447 THOC5Q13769 683 aaKnown RBP12.38□□□□□ -0.43
CHD3-206ENST00000452447 CCSMST1Q4G0I0 132 aa12.38□□□□□ -0.43
CHD3-206ENST00000452447 TCTE1Q5JU00 501 aa12.38□□□□□ -0.43
CHD3-206ENST00000452447 ANKRD22Q5VYY1 191 aa12.38□□□□□ -0.43
CHD3-206ENST00000452447 TTLL10Q6ZVT0 673 aa12.38□□□□□ -0.43
CHD3-206ENST00000452447 CAND1Q86VP6 1230 aaKnown RBP12.38□□□□□ -0.43
CHD3-206ENST00000452447 ATCAYQ86WG3 371 aa12.38□□□□□ -0.43
CHD3-206ENST00000452447 CILP2Q8IUL8 1156 aa12.38□□□□□ -0.43
CHD3-206ENST00000452447 FDCSPQ8NFU4 85 aa12.38□□□□□ -0.43
CHD3-206ENST00000452447 ZNF669Q96BR6 464 aaPredicted RBP12.38□□□□□ -0.43
CHD3-206ENST00000452447 FER1L6-AS2Q96M78 137 aa12.38□□□□□ -0.43
CHD3-206ENST00000452447 CCDC68Q9H2F9 335 aa12.38□□□□□ -0.43
CHD3-206ENST00000452447 GPR83Q9NYM4 423 aa12.38□□□□□ -0.43
CHD3-206ENST00000452447 PLAAQ9Y263 795 aa12.38□□□□□ -0.43
CHD3-206ENST00000452447 PCDHGB7Q9Y5F8 929 aa12.38□□□□□ -0.43
CHD3-206ENST00000452447 DOCK10Q96BY6 2186 aa12.37□□□□□ -0.43
CHD3-206ENST00000452447 GOLGA6L10A0A0M3HER8 536 aa12.37□□□□□ -0.43
CHD3-206ENST00000452447 A0A1B0GX78 115 aa12.37□□□□□ -0.43
CHD3-206ENST00000452447 TARM1B6A8C7 271 aa12.37□□□□□ -0.43
CHD3-206ENST00000452447 CEACAM4O75871 244 aa12.37□□□□□ -0.43
CHD3-206ENST00000452447 PIM1P11309 404 aaPredicted RBP12.37□□□□□ -0.43
CHD3-206ENST00000452447 PKMP14618 531 aaKnown RBP12.37□□□□□ -0.43
CHD3-206ENST00000452447 ATP5DP30049 168 aa12.37□□□□□ -0.43
CHD3-206ENST00000452447 GRM7Q14831 915 aa12.37□□□□□ -0.43
CHD3-206ENST00000452447 CYP1B1Q16678 543 aa12.37□□□□□ -0.43
CHD3-206ENST00000452447 ANKRD20A4Q4UJ75 823 aa12.37□□□□□ -0.43
CHD3-206ENST00000452447 PAPD7Q5XG87 772 aaKnown RBP12.37□□□□□ -0.43
CHD3-206ENST00000452447 FCRL6Q6DN72 434 aa12.37□□□□□ -0.43
CHD3-206ENST00000452447 ZNF470Q6ECI4 717 aa12.37□□□□□ -0.43
CHD3-206ENST00000452447 CENPUQ71F23 418 aa12.37□□□□□ -0.43
CHD3-206ENST00000452447 MRGPREQ86SM8 312 aa12.37□□□□□ -0.43
CHD3-206ENST00000452447 CLEC1AQ8NC01 280 aa12.37□□□□□ -0.43
CHD3-206ENST00000452447 MCUQ8NE86 351 aa12.37□□□□□ -0.43
CHD3-206ENST00000452447 OR2Y1Q8NGV0 311 aa12.37□□□□□ -0.43
CHD3-206ENST00000452447 HMGCLL1Q8TB92 370 aa12.37□□□□□ -0.43
CHD3-206ENST00000452447 GRK7Q8WTQ7 553 aa12.37□□□□□ -0.43
CHD3-206ENST00000452447 PTERQ96BW5 349 aa12.37□□□□□ -0.43
CHD3-206ENST00000452447 SERPINB12Q96P63 405 aa12.37□□□□□ -0.43
CHD3-206ENST00000452447 MIPEPQ99797 713 aa12.37□□□□□ -0.43
CHD3-206ENST00000452447 SELENOSQ9BQE4 189 aa12.37□□□□□ -0.43
CHD3-206ENST00000452447 INTS10Q9NVR2 710 aaKnown RBP12.37□□□□□ -0.43
CHD3-206ENST00000452447 IL1RAPL1Q9NZN1 696 aa12.37□□□□□ -0.43
CHD3-206ENST00000452447 MAD1L1Q9Y6D9 718 aa12.37□□□□□ -0.43
CHD3-206ENST00000452447 SPTAN1Q13813 2472 aaKnown RBP12.37□□□□□ -0.43
CHD3-206ENST00000452447 KRT87PA6NCN2 255 aa12.36□□□□□ -0.43
CHD3-206ENST00000452447 ZSCAN12O43309 604 aa12.36□□□□□ -0.43
CHD3-206ENST00000452447 PRICKLE3O43900 615 aaPredicted RBP12.36□□□□□ -0.43
CHD3-206ENST00000452447 SRPX2O60687 465 aaPredicted RBP12.36□□□□□ -0.43
CHD3-206ENST00000452447 DPM1O60762 260 aa12.36□□□□□ -0.43
CHD3-206ENST00000452447 USP1O94782 785 aa12.36□□□□□ -0.43
CHD3-206ENST00000452447 MATN4O95460 622 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms