RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 SPTY2D1-AS1A0A0U1RR47 76 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 ATP6AP2A0A1C7CYW4 349 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 KRT87PA6NCN2 255 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 TMEM221A6NGB7 291 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 OR5K4A6NMS3 321 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 OR52A4PA6NMU1 304 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 E7ENX8 843 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 M0R296 226 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 TLR4O00206 839 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 MANBAO00462 879 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 SLC22A2O15244 555 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 PEX11AO75192 247 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 ATP6AP2O75787 350 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 CCNDBP1O95273 360 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 VIPP01282 170 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 GNSP15586 552 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 JUNDP17535 347 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 AOC1P19801 751 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 CALB2P22676 271 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 CXCR2P25025 360 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 AK4P27144 223 aaPredicted RBP9.39□□□□□ -0.91
RFC4-210ENST00000449502 MAOBP27338 520 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 ADSLP30566 484 aaPredicted RBP9.39□□□□□ -0.91
RFC4-210ENST00000449502 HOXA6P31267 233 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 HNF4AP41235 474 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 FNTBP49356 437 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 RAB28P51157 221 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 TAP2Q03519 686 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 CSTF1Q05048 431 aaKnown RBP9.39□□□□□ -0.91
RFC4-210ENST00000449502 LAPTM5Q13571 262 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 CLCA4Q14CN2 919 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 ELOCQ15369 112 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 NR6A1Q15406 480 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 CYP2A13Q16696 494 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 GALNTL6Q49A17 601 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 GGTA1PQ4G0N0 100 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 TJAP1Q5JTD0 557 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 TPRG1LQ5T0D9 272 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 CWF19L1Q69YN2 538 aaKnown RBP9.39□□□□□ -0.91
RFC4-210ENST00000449502 DUS1LQ6P1R4 473 aaKnown RBP9.39□□□□□ -0.91
RFC4-210ENST00000449502 ABRAXAS1Q6UWZ7 409 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 ARMCX6Q7L4S7 300 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 TMPRSS11BQ86T26 416 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 WDR5BQ86VZ2 330 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 LONP2Q86WA8 852 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 C17orf64Q86WR6 236 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 TMEFF1Q8IYR6 380 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 KRT78Q8N1N4 520 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 C2orf73Q8N5S3 287 aaPredicted RBP9.39□□□□□ -0.91
RFC4-210ENST00000449502 FNDC5Q8NAU1 212 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 SLC5A11Q8WWX8 675 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 UBE2E3Q969T4 207 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 PTCD3Q96EY7 689 aaKnown RBP9.39□□□□□ -0.91
RFC4-210ENST00000449502 MAELQ96JY0 434 aaKnown RBP9.39□□□□□ -0.91
RFC4-210ENST00000449502 CAMK1GQ96NX5 476 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 NECAB3Q96P71 396 aaPredicted RBP9.39□□□□□ -0.91
RFC4-210ENST00000449502 IL17FQ96PD4 163 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 AKTIPQ9H8T0 292 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 CD320Q9NPF0 282 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 TBC1D29Q9UFV1 150 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 APOBEC3BQ9UH17 382 aaKnown RBP9.39□□□□□ -0.91
RFC4-210ENST00000449502 ZNF490Q9ULM2 529 aaPredicted RBP9.39□□□□□ -0.91
RFC4-210ENST00000449502 EIF3LQ9Y262 564 aaKnown RBP9.39□□□□□ -0.91
RFC4-210ENST00000449502 TRBV23OR9-2A0A075B6M9 112 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 PRR5-ARHGAP8B1AHC4 643 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 C10orf142B7Z368 130 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 E7EQ34 232 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 UNC5CO95185 931 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 CBX6O95503 412 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 PDGFBP01127 241 aaPredicted RBP9.38□□□□□ -0.91
RFC4-210ENST00000449502 JUNP05412 331 aaKnown RBP9.38□□□□□ -0.91
RFC4-210ENST00000449502 C1GALT1C1LP0DN25 315 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 THRAP10827 490 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 PCNAP12004 261 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 F3P13726 295 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 JUPP14923 745 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 BCKDHBP21953 392 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 SHMT2P34897 504 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 SCTRP47872 440 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 DHPSP49366 369 aaPredicted RBP9.38□□□□□ -0.91
RFC4-210ENST00000449502 ZNF33BQ06732 778 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 EIF2B5Q13144 721 aaKnown RBP9.38□□□□□ -0.91
RFC4-210ENST00000449502 MAD2L1Q13257 205 aaPredicted RBP9.38□□□□□ -0.91
RFC4-210ENST00000449502 TUBB3Q13509 450 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 DOC2AQ14183 400 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 FASTKQ14296 549 aaKnown RBP9.38□□□□□ -0.91
RFC4-210ENST00000449502 FZD2Q14332 565 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 PLCL1Q15111 1095 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 GSTA3Q16772 222 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 ZNF542PQ5EBM4 170 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 LYSMD4Q5XG99 296 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 FAM91A1Q658Y4 838 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 GRHL2Q6ISB3 625 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 MED27Q6P2C8 311 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 TSSK4Q6SA08 328 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 NXPE4Q6UWF7 544 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 SUSD1Q6UWL2 747 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 LCTLQ6UWM7 567 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 XKR5Q6UX68 686 aa9.38□□□□□ -0.91
RFC4-210ENST00000449502 GKN2Q86XP6 184 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms