RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 CELF2O95319 508 aaKnown RBP18.61■□□□□ 0.57
SDCBP-204ENST00000447182 TRIM16O95361 564 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 CLDN9O95484 217 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 MYCLP1P12525 358 aaPredicted RBP18.61■□□□□ 0.57
SDCBP-204ENST00000447182 BMP4P12644 408 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 CORO1AP31146 461 aaKnown RBP18.61■□□□□ 0.57
SDCBP-204ENST00000447182 MAP2K4P45985 399 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 MASP1P48740 699 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 ST13P50502 369 aaKnown RBP18.61■□□□□ 0.57
SDCBP-204ENST00000447182 NFATC2Q13469 925 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 HIST2H2ACQ16777 129 aaPredicted RBP18.61■□□□□ 0.57
SDCBP-204ENST00000447182 ADGRF1Q5T601 910 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 AGAP7PQ5VUJ5 663 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 MFSD14CQ5VZR4 134 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 LAIR1Q6GTX8 287 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 MACC1Q6ZN28 852 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 MSANTD1Q6ZTZ1 278 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 CEP68Q76N32 757 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 BEND7Q8N7W2 519 aaPredicted RBP18.61■□□□□ 0.57
SDCBP-204ENST00000447182 APOL4Q9BPW4 351 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 INPP5KQ9BT40 448 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 BTBD2Q9BX70 525 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 RIBC2Q9H4K1 309 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 ASB8Q9H765 288 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 NDRG4Q9ULP0 352 aaKnown RBP18.61■□□□□ 0.57
SDCBP-204ENST00000447182 MAN1A2O60476 641 aa18.6■□□□□ 0.57
SDCBP-204ENST00000447182 CNOT3O75175 753 aaKnown RBP18.6■□□□□ 0.57
SDCBP-204ENST00000447182 NTRK1P04629 796 aa18.6■□□□□ 0.57
SDCBP-204ENST00000447182 ITGALP20701 1170 aa18.6■□□□□ 0.57
SDCBP-204ENST00000447182 PRPH2P23942 346 aa18.6■□□□□ 0.57
SDCBP-204ENST00000447182 ACRV1P26436 265 aa18.6■□□□□ 0.57
SDCBP-204ENST00000447182 SIM2Q14190 667 aaPredicted RBP18.6■□□□□ 0.57
SDCBP-204ENST00000447182 INAQ16352 499 aa18.6■□□□□ 0.57
SDCBP-204ENST00000447182 LYPLAL1Q5VWZ2 237 aa18.6■□□□□ 0.57
SDCBP-204ENST00000447182 CCSAPQ6IQ19 270 aaPredicted RBP18.6■□□□□ 0.57
SDCBP-204ENST00000447182 SERPINA11Q86U17 422 aa18.6■□□□□ 0.57
SDCBP-204ENST00000447182 TSPYL5Q86VY4 417 aaPredicted RBP18.6■□□□□ 0.57
SDCBP-204ENST00000447182 CLDN19Q8N6F1 224 aa18.6■□□□□ 0.57
SDCBP-204ENST00000447182 PIH1D2Q8WWB5 315 aa18.6■□□□□ 0.57
SDCBP-204ENST00000447182 OVCA2Q8WZ82 227 aa18.6■□□□□ 0.57
SDCBP-204ENST00000447182 BARD1Q99728 777 aaKnown RBP18.6■□□□□ 0.57
SDCBP-204ENST00000447182 ABCG2Q9UNQ0 655 aa18.6■□□□□ 0.57
SDCBP-204ENST00000447182 GMPPBQ9Y5P6 360 aa18.6■□□□□ 0.57
SDCBP-204ENST00000447182 ZNF106Q9H2Y7 1883 aaKnown RBP18.6■□□□□ 0.57
SDCBP-204ENST00000447182 COCHO43405 550 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 PGLSO95336 258 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 SEMG1P04279 462 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 ALPIP09923 528 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 CTPS1P17812 591 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 FPR1P21462 350 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 DNAJA1P31689 397 aaKnown RBP18.59■□□□□ 0.57
SDCBP-204ENST00000447182 VBP1P61758 197 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 CDKL4Q5MAI5 379 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 HECTD3Q5T447 861 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 ARMC12Q5T9G4 340 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 C16orf59Q7L2K0 433 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 ZNF551Q7Z340 670 aaPredicted RBP18.59■□□□□ 0.57
SDCBP-204ENST00000447182 ADCK1Q86TW2 530 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 CADM3Q8N126 398 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 MYO19Q96H55 970 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 ASPSCR1Q9BZE9 553 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 LATS2Q9NRM7 1088 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 TRIM43BA6NCK2 446 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 ZNF840PA6NDX5 716 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 NPIPB8E9PQR5 432 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 AQP9O43315 295 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 RGS10O43665 173 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 PDYNP01213 254 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 GSNP06396 782 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 CDKN2CP42773 168 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 EIF2B2P49770 351 aaKnown RBP18.59■□□□□ 0.57
SDCBP-204ENST00000447182 RHOAP61586 193 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 FADDQ13158 208 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 GGTA1PQ4G0N0 100 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 PAGE2BQ5JRK9 111 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 OR10Q1Q8NGQ4 319 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 TRIB2Q92519 343 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 ABHD8Q96I13 439 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 ZFYVE1Q9HBF4 777 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 ANKHQ9HCJ1 492 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 ACOT13Q9NPJ3 140 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 MARCH5Q9NX47 278 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 CEP350Q5VT06 3117 aa18.59■□□□□ 0.57
SDCBP-204ENST00000447182 SCN8AQ9UQD0 1980 aa18.58■□□□□ 0.57
SDCBP-204ENST00000447182 MT-ND2P03891 347 aa18.58■□□□□ 0.57
SDCBP-204ENST00000447182 ACPPP15309 386 aa18.58■□□□□ 0.57
SDCBP-204ENST00000447182 EPORP19235 508 aa18.58■□□□□ 0.57
SDCBP-204ENST00000447182 CTGFP29279 349 aa18.58■□□□□ 0.57
SDCBP-204ENST00000447182 AP1S1P61966 158 aa18.58■□□□□ 0.57
SDCBP-204ENST00000447182 MAD2L1BPQ15013 274 aaPredicted RBP18.58■□□□□ 0.57
SDCBP-204ENST00000447182 PLEKHG7Q6ZR37 379 aa18.58■□□□□ 0.57
SDCBP-204ENST00000447182 TTC29Q8NA56 475 aaPredicted RBP18.58■□□□□ 0.57
SDCBP-204ENST00000447182 SIGLEC11Q96RL6 698 aa18.58■□□□□ 0.57
SDCBP-204ENST00000447182 HTATIP2Q9BUP3 242 aa18.58■□□□□ 0.57
SDCBP-204ENST00000447182 ALOXE3Q9BYJ1 711 aa18.58■□□□□ 0.57
SDCBP-204ENST00000447182 SLC32A1Q9H598 525 aa18.58■□□□□ 0.57
SDCBP-204ENST00000447182 IL26Q9NPH9 171 aa18.58■□□□□ 0.57
SDCBP-204ENST00000447182 AASDHPPTQ9NRN7 309 aa18.58■□□□□ 0.57
SDCBP-204ENST00000447182 PPT2Q9UMR5 302 aa18.58■□□□□ 0.57
SDCBP-204ENST00000447182 TMED5Q9Y3A6 229 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms