RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 DPH5Q9H2P9 285 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 FAM60AQ9NP50 221 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 TXLNGQ9NUQ3 528 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 ZFATQ9P243 1243 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 GALPQ9UBC7 116 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 FARSAQ9Y285 508 aaKnown RBP10.09□□□□□ -0.79
MCF2L-216ENST00000439475 VWA7Q9Y334 891 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 KMT2BQ9UMN6 2715 aaPredicted RBP10.08□□□□□ -0.8
MCF2L-216ENST00000439475 E7ESA3 106 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 FANCGO15287 622 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 NKX2-8O15522 239 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 ZNF749O43361 778 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 SRPX2O60687 465 aaPredicted RBP10.08□□□□□ -0.8
MCF2L-216ENST00000439475 SYF2O95926 243 aaKnown RBP10.08□□□□□ -0.8
MCF2L-216ENST00000439475 C8GP07360 202 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 RAB40ALP0C0E4 278 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 PIM1P11309 404 aaPredicted RBP10.08□□□□□ -0.8
MCF2L-216ENST00000439475 WT1P19544 449 aaPredicted RBP10.08□□□□□ -0.8
MCF2L-216ENST00000439475 MAGP20916 626 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 PEBP1P30086 187 aaKnown RBP10.08□□□□□ -0.8
MCF2L-216ENST00000439475 RPA3P35244 121 aaPredicted RBP10.08□□□□□ -0.8
MCF2L-216ENST00000439475 CYP4F2P78329 520 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 CBLBQ13191 982 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 CUL1Q13616 776 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 TSTA3Q13630 321 aaPredicted RBP10.08□□□□□ -0.8
MCF2L-216ENST00000439475 CYP2A13Q16696 494 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 TCTE1Q5JU00 501 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 STEAP4Q687X5 459 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 CYHR1Q6ZMK1 362 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 UBE2R2Q712K3 238 aaPredicted RBP10.08□□□□□ -0.8
MCF2L-216ENST00000439475 TAX1BP1Q86VP1 789 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 IGDCC3Q8IVU1 814 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 CPNE9Q8IYJ1 553 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 ZBED8Q8IZ13 594 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 DSELQ8IZU8 1212 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 DNAJC22Q8N4W6 341 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 GPATCH11Q8N954 259 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 LMNTD1Q8N9Z9 388 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 LINC01555Q8NAE3 123 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 FLVCR1-AS1Q8TAF5 88 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 CD200R1Q8TD46 325 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 ZNF592Q92610 1267 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 DLG3Q92796 817 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 EXTL1Q92935 676 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 MED8Q96G25 268 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 C16orf45Q96MC5 204 aaPredicted RBP10.08□□□□□ -0.8
MCF2L-216ENST00000439475 PWWP2AQ96N64 755 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 NDC1Q9BTX1 674 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 TRIM54Q9BYV2 358 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 TXNDC16Q9P2K2 825 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 CIDEBQ9UHD4 219 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 IL17BQ9UHF5 180 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 SRPK3Q9UPE1 567 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 RUVBL2Q9Y230 463 aaKnown RBP10.08□□□□□ -0.8
MCF2L-216ENST00000439475 PCDHGA6Q9Y5G7 932 aa10.08□□□□□ -0.8
MCF2L-216ENST00000439475 ARHGEF33A8MVX0 844 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 C9J4A7 227 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 GFYI3L273 518 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 MYO1CO00159 1063 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 SLC16A5O15375 505 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 PRICKLE3O43900 615 aaPredicted RBP10.07□□□□□ -0.8
MCF2L-216ENST00000439475 CREG1O75629 220 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 GSTA2P09210 222 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 MCM3P25205 808 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 PTPN4P29074 926 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 PNLIPRP1P54315 467 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 SLC12A2P55011 1212 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 PLTPP55058 493 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 IL2P60568 153 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 MRPS25P82663 173 aaKnown RBP10.07□□□□□ -0.8
MCF2L-216ENST00000439475 CDC20Q12834 499 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 GPS2Q13227 327 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 ERV3-1Q14264 604 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 TBR1Q16650 682 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 WHAMMP3Q1A5X7 153 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 FAM214AQ32MH5 1076 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 CCSMST1Q4G0I0 132 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 THEMIS2Q5TEJ8 643 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 HECTD2Q5U5R9 776 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 YOD1Q5VVQ6 348 aaPredicted RBP10.07□□□□□ -0.8
MCF2L-216ENST00000439475 DUPD1Q68J44 220 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 FAM199XQ6PEV8 388 aaPredicted RBP10.07□□□□□ -0.8
MCF2L-216ENST00000439475 ZNF572Q7Z3I7 529 aaPredicted RBP10.07□□□□□ -0.8
MCF2L-216ENST00000439475 SYVN1Q86TM6 617 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 SLC26A11Q86WA9 606 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 MCATQ8IVS2 390 aaKnown RBP10.07□□□□□ -0.8
MCF2L-216ENST00000439475 SYTL1Q8IYJ3 562 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 TTC29Q8NA56 475 aaPredicted RBP10.07□□□□□ -0.8
MCF2L-216ENST00000439475 MNS1Q8NEH6 495 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 OR2L3Q8NG85 312 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 OR2A1Q8NGT9 310 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 PROKR1Q8TCW9 393 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 CT55Q8WUE5 264 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 ASB11Q8WXH4 323 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 RNF31Q96EP0 1072 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 VPS39Q96JC1 886 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 CCDC138Q96M89 665 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 BBC3Q96PG8 261 aaPredicted RBP10.07□□□□□ -0.8
MCF2L-216ENST00000439475 PKP4Q99569 1192 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 NDNQ99608 321 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms