RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 MAPK8P45983 427 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 PLA2G16P53816 162 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 SYTL3Q4VX76 610 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 XKR6Q5GH73 641 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 SPARTQ8N0X7 666 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 RAB2BQ8WUD1 216 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 ACDQ96AP0 544 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 DPH2Q9BQC3 489 aaPredicted RBP16.31■□□□□ 0.2
TTC3-209ENST00000438055 CLMPQ9H6B4 373 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 KIAA1522Q9P206 1035 aaPredicted RBP16.31■□□□□ 0.2
TTC3-209ENST00000438055 PSME2Q9UL46 239 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 GMPPBQ9Y5P6 360 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 GRXCR2A6NFK2 248 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 CFAP99D6REC4 459 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 FPGTO14772 594 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 EPN2O95208 641 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 CYP2A7P20853 494 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 RPS3P23396 243 aaKnown RBP eCLIP16.31■□□□□ 0.23e-8■■■□□ 17.1
TTC3-209ENST00000438055 TM4SF4P48230 202 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 BMXP51813 675 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 ACSM2AQ08AH3 577 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 PLEKHG6Q3KR16 790 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 TBC1D25Q3MII6 688 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 RBM48Q5RL73 367 aaKnown RBP16.31■□□□□ 0.2
TTC3-209ENST00000438055 PERM1Q5SV97 790 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 ACSM2BQ68CK6 577 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 SERPINA13PQ6UXR4 307 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 TMEM179BQ7Z7N9 219 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 CHDHQ8NE62 594 aaPredicted RBP16.31■□□□□ 0.2
TTC3-209ENST00000438055 OR7A2PQ8NGA2 310 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 TBC1D15Q8TC07 691 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 PYURFQ96I23 114 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 REXO4Q9GZR2 422 aaKnown RBP16.31■□□□□ 0.2
TTC3-209ENST00000438055 KAT8Q9H7Z6 458 aaKnown RBP16.31■□□□□ 0.2
TTC3-209ENST00000438055 SH3BP4Q9P0V3 963 aa16.31■□□□□ 0.2
TTC3-209ENST00000438055 ZNF701M0R085 212 aaPredicted RBP16.3■□□□□ 0.2
TTC3-209ENST00000438055 GAPDHSO14556 408 aaPredicted RBP16.3■□□□□ 0.2
TTC3-209ENST00000438055 INMTO95050 263 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 ZNF829Q3KNS6 432 aaPredicted RBP16.3■□□□□ 0.2
TTC3-209ENST00000438055 ZNF648Q5T619 568 aaPredicted RBP16.3■□□□□ 0.2
TTC3-209ENST00000438055 RBM23Q86U06 439 aaKnown RBP16.3■□□□□ 0.2
TTC3-209ENST00000438055 C10orf111Q8N326 155 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 ARMC7Q9H6L4 198 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 AASDHPPTQ9NRN7 309 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 SCN3BQ9NY72 215 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 PDP1Q9P0J1 537 aaPredicted RBP16.3■□□□□ 0.2
TTC3-209ENST00000438055 VTCN1Q7Z7D3 282 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 ZSWIM9Q86XI8 627 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 HIPK1Q86Z02 1210 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 ZCCHC7Q8N3Z6 543 aaKnown RBP16.3■□□□□ 0.2
TTC3-209ENST00000438055 OR13F1Q8NGS4 319 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 HDAC2Q92769 488 aaKnown RBP16.3■□□□□ 0.2
TTC3-209ENST00000438055 DCAF13Q9NV06 445 aaKnown RBP16.3■□□□□ 0.2
TTC3-209ENST00000438055 DNAJC11Q9NVH1 559 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 VWA8A3KMH1 1905 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 GNG14A0A1W2PPG7 69 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 A0A1W2PRU2 124 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 MYO1DO94832 1006 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 PHC1P78364 1004 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 USP39Q53GS9 565 aaKnown RBP16.3■□□□□ 0.2
TTC3-209ENST00000438055 ZNF783Q6ZMS7 281 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 TPRG1Q6ZUI0 275 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 PIWIL3Q7Z3Z3 882 aaKnown RBP16.3■□□□□ 0.2
TTC3-209ENST00000438055 ZNF554Q86TJ5 538 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 NELL1Q92832 810 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 NTMT1Q9BV86 223 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 FUNDC2Q9BWH2 189 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 SUV39H2Q9H5I1 410 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 SLCO3A1Q9UIG8 710 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 INSL5Q9Y5Q6 135 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 BACE2Q9Y5Z0 518 aa16.3■□□□□ 0.2
TTC3-209ENST00000438055 CLIC1O00299 241 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 LRG1P02750 347 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 ENGP17813 658 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 PPP3CCP48454 512 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 ZXDBP98169 803 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 RAPSNQ13702 412 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 CTU2Q2VPK5 515 aaKnown RBP16.29■□□□□ 0.2
TTC3-209ENST00000438055 MACC1Q6ZN28 852 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 Q6ZVU0 165 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 EGFL6Q8IUX8 553 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 SMYD1Q8NB12 490 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 ZNF540Q8NDQ6 660 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 ERLEC1Q96DZ1 483 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 ZNF558Q96NG5 402 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 VN1R3Q9BXE9 311 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 BRD9Q9H8M2 597 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 BOLA2-SMG1P6H3BVE0 249 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 FADS2O95864 444 aaKnown RBP16.29■□□□□ 0.2
TTC3-209ENST00000438055 PRPS2P11908 318 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 SDC1P18827 310 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 NKX3-2P78367 333 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 FRG2Q64ET8 278 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 SLC15A4Q8N697 577 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 ADAMTS16Q8TE57 1224 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 FRG2BQ96QU4 278 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 KCNH6Q9H252 994 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 LMCD1Q9NZU5 365 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 ZNF639Q9UID6 485 aa16.29■□□□□ 0.2
TTC3-209ENST00000438055 CCL27Q9Y4X3 112 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms