RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 IGHEP01854 428 aa15.86■□□□□ 0.13
VARS-216ENST00000428445 PTMAP06454 111 aaKnown RBP15.86■□□□□ 0.13
VARS-216ENST00000428445 CD9P21926 228 aa15.86■□□□□ 0.13
VARS-216ENST00000428445 PSMB5P28074 263 aa15.86■□□□□ 0.13
VARS-216ENST00000428445 RAB28P51157 221 aa15.86■□□□□ 0.13
VARS-216ENST00000428445 SRSF11Q05519 484 aaKnown RBP15.86■□□□□ 0.13
VARS-216ENST00000428445 CCSMST1Q4G0I0 132 aa15.86■□□□□ 0.13
VARS-216ENST00000428445 RAD9BQ6WBX8 426 aa15.86■□□□□ 0.13
VARS-216ENST00000428445 LINC00696Q6ZRV3 163 aa15.86■□□□□ 0.13
VARS-216ENST00000428445 ZNF534Q76KX8 674 aa15.86■□□□□ 0.13
VARS-216ENST00000428445 PRSS58Q8IYP2 241 aa15.86■□□□□ 0.13
VARS-216ENST00000428445 SLC22A15Q8IZD6 547 aa15.86■□□□□ 0.13
VARS-216ENST00000428445 ST6GALNAC3Q8NDV1 305 aa15.86■□□□□ 0.13
VARS-216ENST00000428445 ATG4AQ8WYN0 398 aa15.86■□□□□ 0.13
VARS-216ENST00000428445 TM9SF4Q92544 642 aa15.86■□□□□ 0.13
VARS-216ENST00000428445 CUTCQ9NTM9 273 aa15.86■□□□□ 0.13
VARS-216ENST00000428445 A0A1B0GX78 115 aa15.85■□□□□ 0.13
VARS-216ENST00000428445 GOLGA6L9A6NEM1 432 aa15.85■□□□□ 0.13
VARS-216ENST00000428445 E2F3O00716 465 aa15.85■□□□□ 0.13
VARS-216ENST00000428445 DSCR3O14972 297 aa15.85■□□□□ 0.13
VARS-216ENST00000428445 KLHL41O60662 606 aa15.85■□□□□ 0.13
VARS-216ENST00000428445 KLHL18O94889 574 aa15.85■□□□□ 0.13
VARS-216ENST00000428445 ETS1P14921 441 aa15.85■□□□□ 0.13
VARS-216ENST00000428445 YBX1P67809 324 aaKnown RBP15.85■□□□□ 0.13
VARS-216ENST00000428445 CDC16Q13042 620 aa15.85■□□□□ 0.13
VARS-216ENST00000428445 SF1Q15637 639 aaKnown RBP15.85■□□□□ 0.13
VARS-216ENST00000428445 TSTD2Q5T7W7 516 aa15.85■□□□□ 0.13
VARS-216ENST00000428445 DNAAF3Q8N9W5 541 aa15.85■□□□□ 0.13
VARS-216ENST00000428445 OR6P1Q8NGX9 317 aa15.85■□□□□ 0.13
VARS-216ENST00000428445 DLG3Q92796 817 aa15.85■□□□□ 0.13
VARS-216ENST00000428445 THOC3Q96J01 351 aaKnown RBP15.85■□□□□ 0.13
VARS-216ENST00000428445 ETNK1Q9HBU6 452 aa15.85■□□□□ 0.13
VARS-216ENST00000428445 AGPAT4Q9NRZ5 378 aa15.85■□□□□ 0.13
VARS-216ENST00000428445 RUVBL2Q9Y230 463 aaKnown RBP15.85■□□□□ 0.13
VARS-216ENST00000428445 ENO4A6NNW6 628 aa15.84■□□□□ 0.13
VARS-216ENST00000428445 F8W8V4 182 aa15.84■□□□□ 0.13
VARS-216ENST00000428445 CTSVO60911 334 aa15.84■□□□□ 0.13
VARS-216ENST00000428445 GPC4O75487 556 aa15.84■□□□□ 0.13
VARS-216ENST00000428445 FTCDO95954 541 aa15.84■□□□□ 0.13
VARS-216ENST00000428445 PRF1P14222 555 aa15.84■□□□□ 0.13
VARS-216ENST00000428445 ARSFP54793 590 aa15.84■□□□□ 0.13
VARS-216ENST00000428445 VSX2P58304 361 aaPredicted RBP15.84■□□□□ 0.13
VARS-216ENST00000428445 KLF1Q13351 362 aaPredicted RBP15.84■□□□□ 0.13
VARS-216ENST00000428445 KCTD19Q17RG1 926 aaPredicted RBP15.84■□□□□ 0.13
VARS-216ENST00000428445 DNAJC21Q5F1R6 531 aaKnown RBP15.84■□□□□ 0.13
VARS-216ENST00000428445 AGAP7PQ5VUJ5 663 aa15.84■□□□□ 0.13
VARS-216ENST00000428445 FRMPD2BQ6IN97 320 aa15.84■□□□□ 0.13
VARS-216ENST00000428445 IGFL2Q6UWQ7 119 aa15.84■□□□□ 0.13
VARS-216ENST00000428445 OR11G2Q8NGC1 345 aa15.84■□□□□ 0.13
VARS-216ENST00000428445 OR4L1Q8NH43 312 aa15.84■□□□□ 0.13
VARS-216ENST00000428445 SLC35B2Q8TB61 432 aa15.84■□□□□ 0.13
VARS-216ENST00000428445 PPP4R1Q8TF05 950 aa15.84■□□□□ 0.13
VARS-216ENST00000428445 C8orf44Q96CB5 159 aa15.84■□□□□ 0.13
VARS-216ENST00000428445 AGAP4Q96P64 663 aa15.84■□□□□ 0.13
VARS-216ENST00000428445 SELENOSQ9BQE4 189 aa15.84■□□□□ 0.13
VARS-216ENST00000428445 MARCH4Q9P2E8 410 aaPredicted RBP15.84■□□□□ 0.13
VARS-216ENST00000428445 TSR3Q9UJK0 312 aaKnown RBP15.84■□□□□ 0.13
VARS-216ENST00000428445 AMFRQ9UKV5 643 aa15.84■□□□□ 0.13
VARS-216ENST00000428445 NFS1Q9Y697 457 aa15.84■□□□□ 0.13
VARS-216ENST00000428445 MYO7BQ6PIF6 2116 aa15.83■□□□□ 0.13
VARS-216ENST00000428445 LOC105369274A0A096LPK9 316 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 LOC102723532A0A0G2JNH3 316 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 A0A0J9YVX5 310 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 ARHGAP10A1A4S6 786 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 FFAR3O14843 346 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 GPR42O15529 346 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 PRICKLE3O43900 615 aaPredicted RBP15.83■□□□□ 0.12
VARS-216ENST00000428445 KDM1AO60341 852 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 ZG16O60844 167 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 ONECUT2O95948 504 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 BDKRB1P46663 353 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 ZNF169Q14929 603 aaPredicted RBP15.83■□□□□ 0.12
VARS-216ENST00000428445 RBBP7Q16576 425 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 P3H1Q32P28 736 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 TUBB8Q3ZCM7 444 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 WASHC2DQ5SRD0 308 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 LINC00523Q86TU6 105 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 LAPTM4BQ86VI4 370 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 OR4N4Q8N0Y3 316 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 TXLNBQ8N3L3 684 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 UBL4BQ8N7F7 174 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 OR2L8Q8NGY9 312 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 FAR1Q8WVX9 515 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 FKBP10Q96AY3 582 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 TTC1Q99614 292 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 MIPEPQ99797 713 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 LHPPQ9H008 270 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 PLA2G3Q9NZ20 509 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 ZC3H7BQ9UGR2 993 aaKnown RBP15.83■□□□□ 0.12
VARS-216ENST00000428445 SLC39A10Q9ULF5 831 aa15.83■□□□□ 0.12
VARS-216ENST00000428445 VSTM2BA6NLU5 285 aa15.82■□□□□ 0.12
VARS-216ENST00000428445 MIF4GDA9UHW6 222 aaKnown RBP15.82■□□□□ 0.12
VARS-216ENST00000428445 RASGRF2O14827 1237 aa15.82■□□□□ 0.12
VARS-216ENST00000428445 F10P00742 488 aa15.82■□□□□ 0.12
VARS-216ENST00000428445 ALBP02768 609 aa15.82■□□□□ 0.12
VARS-216ENST00000428445 AOAHP28039 575 aa15.82■□□□□ 0.12
VARS-216ENST00000428445 STIP1P31948 543 aaKnown RBP15.82■□□□□ 0.12
VARS-216ENST00000428445 CDH17Q12864 832 aa15.82■□□□□ 0.12
VARS-216ENST00000428445 GRM7Q14831 915 aa15.82■□□□□ 0.12
VARS-216ENST00000428445 FASTKD1Q53R41 847 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms