RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 E7EQ34 232 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 PRMT5O14744 637 aaPredicted RBP12.49□□□□□ -0.41
VRK3-203ENST00000424804 LIN7AO14910 233 aaPredicted RBP12.49□□□□□ -0.41
VRK3-203ENST00000424804 FANCGO15287 622 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 TTI1O43156 1089 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 VPS4BO75351 444 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 F7P08709 466 aaPredicted RBP12.49□□□□□ -0.41
VRK3-203ENST00000424804 CHRM5P08912 532 aaPredicted RBP12.49□□□□□ -0.41
VRK3-203ENST00000424804 MLNP12872 115 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 ITGAXP20702 1163 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 FMO4P31512 558 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 MAGEA6P43360 314 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 MRPS25P82663 173 aaKnown RBP12.49□□□□□ -0.41
VRK3-203ENST00000424804 HSPA14Q0VDF9 509 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 GRB7Q14451 532 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 DEFB110Q30KQ9 67 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 PLEKHN1Q494U1 663 aaPredicted RBP12.49□□□□□ -0.41
VRK3-203ENST00000424804 MRNIPQ6NTE8 343 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 RHBDD2Q6NTF9 364 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 FAM20CQ8IXL6 584 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 TBC1D21Q8IYX1 336 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 NAT8LQ8N9F0 302 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 LMNTD1Q8N9Z9 388 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 MCUQ8NE86 351 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 CFAP61Q8NHU2 1237 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 LKAAEAR1Q8TD35 194 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 SKA2Q8WVK7 121 aaPredicted RBP12.49□□□□□ -0.41
VRK3-203ENST00000424804 FAM136AQ96C01 138 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 C19orf60Q96EN9 201 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 DPH2Q9BQC3 489 aaPredicted RBP12.49□□□□□ -0.41
VRK3-203ENST00000424804 FANCEQ9HB96 536 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 LUZP4Q9P127 313 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 PCYOX1Q9UHG3 505 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 VPS4AQ9UN37 437 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 ASF1AQ9Y294 204 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 CRYL1Q9Y2S2 319 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 CENPEQ02224 2701 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 WIPF3A6NGB9 483 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 CCDC188H7C350 402 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 PFDN6O15212 129 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 BANF1O75531 89 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 UMODP07911 640 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 CCR7P32248 378 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 MRPL49Q13405 166 aaKnown RBP12.48□□□□□ -0.41
VRK3-203ENST00000424804 SSPNQ14714 243 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 TMED2Q15363 201 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 BBS9Q3SYG4 887 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 ANKRD20A4Q4UJ75 823 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 HP1BP3Q5SSJ5 553 aaPredicted RBP12.48□□□□□ -0.41
VRK3-203ENST00000424804 RNASEH2BQ5TBB1 312 aaKnown RBP12.48□□□□□ -0.41
VRK3-203ENST00000424804 C1orf189Q5VU69 101 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 KIAA0930Q6ICG6 404 aaPredicted RBP12.48□□□□□ -0.41
VRK3-203ENST00000424804 PCGF5Q86SE9 256 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 MRGPREQ86SM8 312 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 VRK3Q8IV63 474 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 LINC01555Q8NAE3 123 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 OR5K2Q8NHB8 316 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 GSDMBQ8TAX9 411 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 INPP5DQ92835 1189 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 PNPLA2Q96AD5 504 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 TCTN2Q96GX1 697 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 RUNDC3BQ96NL0 473 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 DHRS4Q9BTZ2 278 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 ZNF552Q9H707 407 aaPredicted RBP12.48□□□□□ -0.41
VRK3-203ENST00000424804 ZBTB20Q9HC78 741 aaPredicted RBP12.48□□□□□ -0.41
VRK3-203ENST00000424804 ENAMQ9NRM1 1142 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 C20orf96Q9NUD7 363 aaPredicted RBP12.48□□□□□ -0.41
VRK3-203ENST00000424804 DHCR7Q9UBM7 475 aaKnown RBP12.48□□□□□ -0.41
VRK3-203ENST00000424804 GNPTGQ9UJJ9 305 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 PLAGL1Q9UM63 463 aa12.48□□□□□ -0.41
VRK3-203ENST00000424804 CELSR2Q9HCU4 2923 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 A0A0J9YY10 115 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 FAM237BA0A1B0GVD1 139 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 MAGEB16A2A368 324 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 PRICKLE3O43900 615 aaPredicted RBP12.47□□□□□ -0.41
VRK3-203ENST00000424804 DPM1O60762 260 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 GPC4O75487 556 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 ONECUT2O95948 504 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 APOA4P06727 396 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 HBQ1P09105 142 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 ARNTP27540 789 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 SHMT2P34897 504 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 SOX8P57073 446 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 ETF1P62495 437 aaKnown RBP12.47□□□□□ -0.41
VRK3-203ENST00000424804 DHX9Q08211 1270 aaKnown RBP12.47□□□□□ -0.41
VRK3-203ENST00000424804 C2orf54Q08AI8 447 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 RAPSNQ13702 412 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 KYNUQ16719 465 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 SLC5A12Q1EHB4 618 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 EIF2S3LQ2VIR3 472 aaKnown RBP12.47□□□□□ -0.41
VRK3-203ENST00000424804 FHL5Q5TD97 284 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 ZNF470Q6ECI4 717 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 NEPROQ6NW34 567 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 SYDE1Q6ZW31 735 aaPredicted RBP12.47□□□□□ -0.41
VRK3-203ENST00000424804 PPP1R32Q7Z5V6 425 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 HPS6Q86YV9 775 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 ZNF592Q92610 1267 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 SNRNP40Q96DI7 357 aaKnown RBP12.47□□□□□ -0.41
VRK3-203ENST00000424804 CFAP36Q96G28 342 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 SGSM3Q96HU1 749 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms