RNA–Protein interactions for RNA: ENST00000416690.5

GTF3C3-203, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 326 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-203ENST00000416690 SPDYCQ5MJ68 293 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 RARS2Q5T160 578 aaKnown RBP0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 LINC00242Q5T6M2 205 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 INTS11Q5TA45 600 aaKnown RBP0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 UGT3A1Q6NUS8 523 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 C3P1Q6ZMU1 363 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 LEKR1Q6ZMV7 388 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 LRRTM4Q86VH4 590 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 FAM114A1Q8IWE2 563 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 CFAP206Q8IYR0 622 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 CDK20Q8IZL9 346 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 TMTC2Q8N394 836 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 TMEM116Q8NCL8 245 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 OR5T2Q8NGG2 359 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 OR10G7Q8NGN6 311 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 HVCN1Q96D96 273 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 ERLEC1Q96DZ1 483 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 APOL2Q9BQE5 337 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 BTBD10Q9BSF8 475 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 C16orf70Q9BSU1 422 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 CCDC28BQ9BUN5 200 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 POLR1BQ9H9Y6 1135 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 KCNMB3Q9NPA1 279 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 RHCGQ9UBD6 479 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 DAPK2Q9UIK4 370 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 LNPEPQ9UIQ6 1025 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 NAALADL1Q9UQQ1 740 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 ZNF541Q9H0D2 1346 aa0.86□□□□□ -2.27
GTF3C3-203ENST00000416690 ARID1AO14497 2285 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 SPRR5A0A1B0GTR4 108 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 C2orf81A6NN90 581 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 ENO4A6NNW6 628 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 SLC33A1O00400 549 aaPredicted RBP0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 TRAFD1O14545 582 aaPredicted RBP0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 WDPCPO95876 746 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 BCL10O95999 233 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 GIG44P09565 113 aaPredicted RBP0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 PRKAR1AP10644 381 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 ACTN1P12814 892 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 DARSP14868 501 aaKnown RBP0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 ANPEPP15144 967 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 ABCD3P28288 659 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 RGRP47804 291 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 HARS2P49590 506 aaKnown RBP0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 RPL7AP62424 266 aaKnown RBP0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 NIPAL4Q0D2K0 466 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 MELKQ14680 651 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 ACSM2BQ68CK6 577 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 SERINC5Q86VE9 423 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 CATSPER3Q86XQ3 398 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 CNTROBQ8N137 903 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 C17orf53Q8N3J3 647 aaPredicted RBP0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 SPATA5Q8NB90 893 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 OR11H4Q8NGC9 324 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 KIR2DL5BQ8NHK3 375 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 ZDHHC19Q8WVZ1 309 aaPredicted RBP0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 ZKSCAN4Q969J2 545 aaPredicted RBP0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 WDFY2Q96P53 400 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 OR6C1Q96RD1 312 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 GAD1Q99259 594 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 RAD9AQ99638 391 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 LPAR4Q99677 370 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 NYXQ9GZU5 481 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 FAM207AQ9NSI2 230 aaPredicted RBP0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 SMC4Q9NTJ3 1288 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 STAU2Q9NUL3 570 aaKnown RBP eCLIP0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 SPHK1Q9NYA1 384 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 FRMD4AQ9P2Q2 1039 aaPredicted RBP0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 AMACRQ9UHK6 382 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 ZHX1Q9UKY1 873 aaPredicted RBP0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 PCDHGA5Q9Y5G8 931 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 CYP46A1Q9Y6A2 500 aa0.85□□□□□ -2.27
GTF3C3-203ENST00000416690 HIVEP2P31629 2446 aa0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 IGHV3-38A0A0C4DH36 116 aa0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 NPIPB15A6NHN6 443 aaPredicted RBP0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 SNURFLB1AK76 121 aa0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 E7ENQ6 273 aa0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 EIF3FO00303 357 aaPredicted RBP0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 TEX28O15482 410 aa0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 SSX4O60224 188 aa0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 SUPT20HL2P0C7V6 817 aa0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 HSPA8P11142 646 aaKnown RBP0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 UBL4AP11441 157 aa0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 AOC1P19801 751 aa0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 CSTF2P33240 577 aaKnown RBP eCLIP0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 PTGER4P35408 488 aa0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 PBX3P40426 434 aa0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 ZNF133P52736 654 aaPredicted RBP0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 NDUFV3P56181 108 aaKnown RBP0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 TLE4Q04727 773 aa0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 TRPC3Q13507 836 aa0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 ODF4Q2M2E3 257 aa0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 PCGF3Q3KNV8 242 aa0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 SLC35D3Q5M8T2 416 aa0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 C9orf66Q5T8R8 295 aa0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 SLC9C2Q5TAH2 1124 aa0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 MARC1Q5VT66 337 aa0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 GARNL3Q5VVW2 1013 aa0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 CYP20A1Q6UW02 462 aa0.84□□□□□ -2.27
GTF3C3-203ENST00000416690 TIFABQ6ZNK6 161 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms