RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 PUS10Q3MIT2 529 aaKnown RBP11.29□□□□□ -0.6
RFFL-205ENST00000415395 UGT3A2Q3SY77 523 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 LEXMQ3ZCV2 418 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 CDKL4Q5MAI5 379 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 CLEC6AQ6EIG7 209 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 ISLR2Q6UXK2 745 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 NEK10Q6ZWH5 1172 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 GPR180Q86V85 440 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 PTRH1Q86Y79 214 aaKnown RBP11.29□□□□□ -0.6
RFFL-205ENST00000415395 GPSM1Q86YR5 675 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 SLC15A3Q8IY34 581 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 FBXO39Q8N4B4 442 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 AADATQ8N5Z0 425 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 HLA-CQ95604 372 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 POP5Q969H6 163 aaKnown RBP11.29□□□□□ -0.6
RFFL-205ENST00000415395 BORCS5Q969J3 196 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 ISOC1Q96CN7 298 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 LRRC58Q96CX6 371 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 KCTD14Q9BQ13 255 aaPredicted RBP11.29□□□□□ -0.6
RFFL-205ENST00000415395 BDH2Q9BUT1 245 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 FAM126AQ9BYI3 521 aaPredicted RBP11.29□□□□□ -0.6
RFFL-205ENST00000415395 RDH14Q9HBH5 336 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 ZDHHC4Q9NPG8 344 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 SMPD3Q9NY59 655 aaPredicted RBP11.29□□□□□ -0.6
RFFL-205ENST00000415395 TRPM6Q9BX84 2022 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 A0A1W2PP18 115 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 ANTXRLA6NF34 631 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 H0YAE9 185 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 UBXN8O00124 270 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 IFRD1O00458 451 aaPredicted RBP11.28□□□□□ -0.6
RFFL-205ENST00000415395 UBFD1O14562 309 aaKnown RBP11.28□□□□□ -0.6
RFFL-205ENST00000415395 PIP5K1BO14986 540 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 RAD51BO15315 384 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 NUAK1O60285 661 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 MMP20O60882 483 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 GMNNO75496 209 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 KLF8O95600 359 aaPredicted RBP11.28□□□□□ -0.6
RFFL-205ENST00000415395 MLYCDO95822 493 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 SOD1P00441 154 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 DNTTP04053 509 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 ALDOCP09972 364 aaKnown RBP11.28□□□□□ -0.6
RFFL-205ENST00000415395 MPC1LP0DKB6 136 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 SRFP11831 508 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 HGFP14210 728 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 HOXB2P14652 356 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 CKMT2P17540 419 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 MAPK9P45984 424 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 PRLHRP49683 370 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 EPS8Q12929 822 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 SKIV2LQ15477 1246 aaKnown RBP11.28□□□□□ -0.6
RFFL-205ENST00000415395 CYP51A1Q16850 503 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 C2orf27AQ580R0 203 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 ANKS6Q68DC2 871 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 METTL2BQ6P1Q9 378 aaKnown RBP11.28□□□□□ -0.6
RFFL-205ENST00000415395 BLOC1S3Q6QNY0 202 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 SPPL2CQ8IUH8 684 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 FUNDC1Q8IVP5 155 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 RBM12BQ8IXT5 1001 aaKnown RBP11.28□□□□□ -0.6
RFFL-205ENST00000415395 HDDC3Q8N4P3 179 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 PDPRQ8NCN5 879 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 PAPD5Q8NDF8 572 aaKnown RBP11.28□□□□□ -0.6
RFFL-205ENST00000415395 OR9I1Q8NGQ6 314 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 CYGBQ8WWM9 190 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 THAP11Q96EK4 314 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 VPS50Q96JG6 964 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 MAGED4Q96JG8 741 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 ZNF514Q96K75 400 aaPredicted RBP11.28□□□□□ -0.6
RFFL-205ENST00000415395 ALG2Q9H553 416 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 PALMDQ9NP74 551 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 IKZF3Q9UKT9 509 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 OARD1Q9Y530 152 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 DNAJC15Q9Y5T4 150 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 F5P12259 2224 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 MYO10Q9HD67 2058 aa11.28□□□□□ -0.6
RFFL-205ENST00000415395 ATP6AP2A0A1C7CYW4 349 aa11.27□□□□□ -0.61
RFFL-205ENST00000415395 PLK4O00444 970 aa11.27□□□□□ -0.61
RFFL-205ENST00000415395 SLC16A5O15375 505 aa11.27□□□□□ -0.61
RFFL-205ENST00000415395 SGTAO43765 313 aa11.27□□□□□ -0.61
RFFL-205ENST00000415395 SNX2O60749 519 aa11.27□□□□□ -0.61
RFFL-205ENST00000415395 ADAM23O75077 832 aa11.27□□□□□ -0.61
RFFL-205ENST00000415395 ATG13O75143 517 aa11.27□□□□□ -0.61
RFFL-205ENST00000415395 EEDO75530 441 aaKnown RBP11.27□□□□□ -0.61
RFFL-205ENST00000415395 ATP6AP2O75787 350 aa11.27□□□□□ -0.61
RFFL-205ENST00000415395 CDK14O94921 469 aa11.27□□□□□ -0.61
RFFL-205ENST00000415395 S100BP04271 92 aaPredicted RBP11.27□□□□□ -0.61
RFFL-205ENST00000415395 ENO2P09104 434 aaPredicted RBP11.27□□□□□ -0.61
RFFL-205ENST00000415395 HOXB6P17509 224 aaKnown RBP11.27□□□□□ -0.61
RFFL-205ENST00000415395 ITGB6P18564 788 aa11.27□□□□□ -0.61
RFFL-205ENST00000415395 SLC6A2P23975 617 aa11.27□□□□□ -0.61
RFFL-205ENST00000415395 CCR7P32248 378 aa11.27□□□□□ -0.61
RFFL-205ENST00000415395 GPR1P46091 355 aa11.27□□□□□ -0.61
RFFL-205ENST00000415395 EMP3P54852 163 aa11.27□□□□□ -0.61
RFFL-205ENST00000415395 TAS2R38P59533 333 aa11.27□□□□□ -0.61
RFFL-205ENST00000415395 TMEM115Q12893 351 aaPredicted RBP11.27□□□□□ -0.61
RFFL-205ENST00000415395 SP140Q13342 867 aa11.27□□□□□ -0.61
RFFL-205ENST00000415395 SPIDRQ14159 915 aa11.27□□□□□ -0.61
RFFL-205ENST00000415395 TGFBIQ15582 683 aa11.27□□□□□ -0.61
RFFL-205ENST00000415395 PFKFB4Q16877 469 aa11.27□□□□□ -0.61
RFFL-205ENST00000415395 BCL7AQ4VC05 210 aa11.27□□□□□ -0.61
RFFL-205ENST00000415395 PDCD4Q53EL6 469 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms