RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 PIKFYVEQ9Y2I7 2098 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 UNC13CQ8NB66 2214 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 COL27A1Q8IZC6 1860 aaPredicted RBP14.13□□□□□ -0.15
LIMS1-206ENST00000414829 SLC9B1P1A6NJY1 282 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 CAPNS1P04632 268 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 TPBGLP0DKB5 382 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 LIPCP11150 499 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 FGF5P12034 268 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 ETV5P41161 510 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 SERPINB8P50452 374 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 ABATP80404 500 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 MAP7Q14244 749 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 UAP1Q16222 522 aaPredicted RBP14.13□□□□□ -0.15
LIMS1-206ENST00000414829 ST3GAL2Q16842 350 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 ZC3H12BQ5HYM0 836 aaKnown RBP14.13□□□□□ -0.15
LIMS1-206ENST00000414829 BROXQ5VW32 411 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 RAPH1Q70E73 1250 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 TBC1D1Q86TI0 1168 aaPredicted RBP14.13□□□□□ -0.15
LIMS1-206ENST00000414829 LMNTD1Q8N9Z9 388 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 SLC44A1Q8WWI5 657 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 IL17FQ96PD4 163 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 TRAPPC9Q96Q05 1148 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 PKP4Q99569 1192 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 CCDC77Q9BR77 488 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 CCDC177Q9NQR7 707 aaPredicted RBP14.13□□□□□ -0.15
LIMS1-206ENST00000414829 ARL15Q9NXU5 204 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 SPHK1Q9NYA1 384 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 CTNNAL1Q9UBT7 734 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 FETUBQ9UGM5 382 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 SERTAD3Q9UJW9 196 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 KLK4Q9Y5K2 254 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 B3GALT1Q9Y5Z6 326 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 ACACBO00763 2458 aa14.13□□□□□ -0.15
LIMS1-206ENST00000414829 A0A087WV48 116 aa14.12□□□□□ -0.15
LIMS1-206ENST00000414829 A0A087X1B8 175 aa14.12□□□□□ -0.15
LIMS1-206ENST00000414829 EXOC1LA0A1B0GW35 172 aa14.12□□□□□ -0.15
LIMS1-206ENST00000414829 TARM1B6A8C7 271 aa14.12□□□□□ -0.15
LIMS1-206ENST00000414829 C9orf172C9J069 976 aa14.12□□□□□ -0.15
LIMS1-206ENST00000414829 KRT37O76014 449 aa14.12□□□□□ -0.15
LIMS1-206ENST00000414829 MT-ND3P03897 115 aa14.12□□□□□ -0.15
LIMS1-206ENST00000414829 ST6GAL1P15907 406 aa14.12□□□□□ -0.15
LIMS1-206ENST00000414829 HRH2P25021 359 aa14.12□□□□□ -0.15
LIMS1-206ENST00000414829 MSH2P43246 934 aa14.12□□□□□ -0.15
LIMS1-206ENST00000414829 HNMTP50135 292 aa14.12□□□□□ -0.15
LIMS1-206ENST00000414829 CDKL1Q00532 357 aa14.12□□□□□ -0.15
LIMS1-206ENST00000414829 GPR135Q8IZ08 494 aa14.12□□□□□ -0.15
LIMS1-206ENST00000414829 DENND1AQ8TEH3 1009 aa14.12□□□□□ -0.15
LIMS1-206ENST00000414829 ZUFSPQ96AP4 578 aa14.12□□□□□ -0.15
LIMS1-206ENST00000414829 PAFAH2Q99487 392 aa14.12□□□□□ -0.15
LIMS1-206ENST00000414829 ULBP3Q9BZM4 244 aa14.12□□□□□ -0.15
LIMS1-206ENST00000414829 TLK1Q9UKI8 766 aa14.12□□□□□ -0.15
LIMS1-206ENST00000414829 ZMIZ1Q9ULJ6 1067 aa14.12□□□□□ -0.15
LIMS1-206ENST00000414829 PDE10AQ9Y233 779 aa14.12□□□□□ -0.15
LIMS1-206ENST00000414829 RAXQ9Y2V3 346 aa14.12□□□□□ -0.15
LIMS1-206ENST00000414829 MTO1Q9Y2Z2 717 aaKnown RBP14.12□□□□□ -0.15
LIMS1-206ENST00000414829 PMS2P1A4D2B8 440 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 AGRPO00253 132 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 RIPK2O43353 540 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 PIAS1O75925 651 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 HBQ1P09105 142 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 EBLN1P0CF75 366 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 FOLR1P15328 257 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 PEBP1P30086 187 aaKnown RBP14.11□□□□□ -0.15
LIMS1-206ENST00000414829 DEKP35659 375 aaKnown RBP14.11□□□□□ -0.15
LIMS1-206ENST00000414829 EIF2S3P41091 472 aaKnown RBP14.11□□□□□ -0.15
LIMS1-206ENST00000414829 SH3BP2P78314 561 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 EFTUD2Q15029 972 aaKnown RBP eCLIP14.11□□□□□ -0.15
LIMS1-206ENST00000414829 CCSMST1Q4G0I0 132 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 CDKL4Q5MAI5 379 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 THEMIS2Q5TEJ8 643 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 CAPN13Q6MZZ7 669 aaPredicted RBP14.11□□□□□ -0.15
LIMS1-206ENST00000414829 KLC3Q6P597 504 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 TAX1BP1Q86VP1 789 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 CEP97Q8IW35 865 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 TCAIMQ8N3R3 496 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 ESX1Q8N693 406 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 LRRN4CLQ8ND94 238 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 OR2L3Q8NG85 312 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 FLVCR1-AS1Q8TAF5 88 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 ZNF480Q8WV37 535 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 FBXL8Q96CD0 374 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 MTBPQ96DY7 904 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 HAUS8Q9BT25 410 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 EFHD1Q9BUP0 239 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 FAM117AQ9C073 453 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 MRPS30Q9NP92 439 aaKnown RBP14.11□□□□□ -0.15
LIMS1-206ENST00000414829 FOXJ2Q9P0K8 574 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 STOX2Q9P2F5 926 aaPredicted RBP14.11□□□□□ -0.15
LIMS1-206ENST00000414829 CIDEBQ9UHD4 219 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 SRPK3Q9UPE1 567 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 TMEM184BQ9Y519 407 aaPredicted RBP14.11□□□□□ -0.15
LIMS1-206ENST00000414829 OARD1Q9Y530 152 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 AP1M2Q9Y6Q5 423 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 TPRP12270 2363 aaKnown RBP14.11□□□□□ -0.15
LIMS1-206ENST00000414829 FREM2Q5SZK8 3169 aa14.11□□□□□ -0.15
LIMS1-206ENST00000414829 E7ENX8 843 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 CPNE3O75131 537 aaKnown RBP14.1□□□□□ -0.15
LIMS1-206ENST00000414829 STK17BO94768 372 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 S100BP04271 92 aaPredicted RBP14.1□□□□□ -0.15
LIMS1-206ENST00000414829 ANXA5P08758 320 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms