RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 VPS39Q96JC1 886 aa24.4■■□□□ 1.5
CPNE1-207ENST00000414664 PKP4Q99569 1192 aa24.4■■□□□ 1.5
CPNE1-207ENST00000414664 CPNE1Q99829 537 aa24.4■■□□□ 1.5
CPNE1-207ENST00000414664 CACNA1BQ00975 2339 aa24.4■■□□□ 1.5
CPNE1-207ENST00000414664 SLC16A5O15375 505 aa24.39■■□□□ 1.49
CPNE1-207ENST00000414664 ERGP11308 486 aa24.39■■□□□ 1.49
CPNE1-207ENST00000414664 SAT1P21673 171 aa24.39■■□□□ 1.49
CPNE1-207ENST00000414664 SLC12A2P55011 1212 aa24.39■■□□□ 1.49
CPNE1-207ENST00000414664 SP140Q13342 867 aa24.39■■□□□ 1.49
CPNE1-207ENST00000414664 PWWP2BQ6NUJ5 590 aa24.39■■□□□ 1.49
CPNE1-207ENST00000414664 C6orf15Q6UXA7 325 aaPredicted RBP24.39■■□□□ 1.49
CPNE1-207ENST00000414664 CTAGE3PQ8IX95 158 aa24.39■■□□□ 1.49
CPNE1-207ENST00000414664 LMNTD1Q8N9Z9 388 aa24.39■■□□□ 1.49
CPNE1-207ENST00000414664 OLFM1Q99784 485 aa24.39■■□□□ 1.49
CPNE1-207ENST00000414664 LHX6Q9UPM6 363 aa24.39■■□□□ 1.49
CPNE1-207ENST00000414664 KRT87PA6NCN2 255 aa24.38■■□□□ 1.49
CPNE1-207ENST00000414664 CXorf49A8MYA2 514 aaPredicted RBP24.38■■□□□ 1.49
CPNE1-207ENST00000414664 TMEM150CB9EJG8 249 aa24.38■■□□□ 1.49
CPNE1-207ENST00000414664 PRICKLE3O43900 615 aaPredicted RBP24.38■■□□□ 1.49
CPNE1-207ENST00000414664 KRT37O76014 449 aa24.38■■□□□ 1.49
CPNE1-207ENST00000414664 CCNYL3P0C7X3 344 aa24.38■■□□□ 1.49
CPNE1-207ENST00000414664 GP5P40197 560 aa24.38■■□□□ 1.49
CPNE1-207ENST00000414664 PNLIPRP1P54315 467 aa24.38■■□□□ 1.49
CPNE1-207ENST00000414664 CXADRP78310 365 aa24.38■■□□□ 1.49
CPNE1-207ENST00000414664 VAC14Q08AM6 782 aa24.38■■□□□ 1.49
CPNE1-207ENST00000414664 ABHD18Q0P651 414 aa24.38■■□□□ 1.49
CPNE1-207ENST00000414664 NAA25Q14CX7 972 aa24.38■■□□□ 1.49
CPNE1-207ENST00000414664 CDHR3Q6ZTQ4 885 aa24.38■■□□□ 1.49
CPNE1-207ENST00000414664 TIPARPQ7Z3E1 657 aaKnown RBP24.38■■□□□ 1.49
CPNE1-207ENST00000414664 TMEM126BQ8IUX1 230 aa24.38■■□□□ 1.49
CPNE1-207ENST00000414664 KIAA1143Q96AT1 154 aaPredicted RBP24.38■■□□□ 1.49
CPNE1-207ENST00000414664 SLC12A9Q9BXP2 914 aa24.38■■□□□ 1.49
CPNE1-207ENST00000414664 ZZEF1O43149 2961 aa24.38■■□□□ 1.49
CPNE1-207ENST00000414664 PKD1L2Q7Z442 2459 aa24.38■■□□□ 1.49
CPNE1-207ENST00000414664 PABPN1LA6NDY0 278 aaKnown RBP24.37■■□□□ 1.49
CPNE1-207ENST00000414664 SCRG1O75711 98 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 HIST1H2AGP0C0S8 130 aaPredicted RBP24.37■■□□□ 1.49
CPNE1-207ENST00000414664 ZNF28P17035 718 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 HIST1H2ADP20671 130 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 MAGP20916 626 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 PHBP35232 272 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 POU4F1Q01851 419 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 NAB1Q13506 487 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 RELL1Q8IUW5 271 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 SPNS2Q8IVW8 549 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 NKAPQ8N5F7 415 aaKnown RBP24.37■■□□□ 1.49
CPNE1-207ENST00000414664 GALNT6Q8NCL4 622 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 FBF1Q8TES7 1133 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 ZUFSPQ96AP4 578 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 TSPAN17Q96FV3 270 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 PDLIM5Q96HC4 596 aaKnown RBP24.37■■□□□ 1.49
CPNE1-207ENST00000414664 HIST1H2AHQ96KK5 128 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 FMO2Q99518 471 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 HIST1H2AJQ99878 128 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 MCMBPQ9BTE3 642 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 H2AFJQ9BTM1 129 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 EFHD1Q9BUP0 239 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 PRORYQ9H606 182 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 PARVBQ9HBI1 364 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 POPDC3Q9HBV1 291 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 CPNE5Q9HCH3 593 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 FAM60AQ9NP50 221 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 CELSR3Q9NYQ7 3312 aa24.37■■□□□ 1.49
CPNE1-207ENST00000414664 TARM1B6A8C7 271 aa24.36■■□□□ 1.49
CPNE1-207ENST00000414664 CPNE3O75131 537 aaKnown RBP24.36■■□□□ 1.49
CPNE1-207ENST00000414664 PIAS1O75925 651 aa24.36■■□□□ 1.49
CPNE1-207ENST00000414664 TIAF1O95411 115 aa24.36■■□□□ 1.49
CPNE1-207ENST00000414664 SLC16A8O95907 504 aa24.36■■□□□ 1.49
CPNE1-207ENST00000414664 RPA3P35244 121 aaPredicted RBP24.36■■□□□ 1.49
CPNE1-207ENST00000414664 ITGA1P56199 1179 aa24.36■■□□□ 1.49
CPNE1-207ENST00000414664 FASTKQ14296 549 aaKnown RBP24.36■■□□□ 1.49
CPNE1-207ENST00000414664 ZIC1Q15915 447 aa24.36■■□□□ 1.49
CPNE1-207ENST00000414664 KBTBD12Q3ZCT8 623 aa24.36■■□□□ 1.49
CPNE1-207ENST00000414664 GRTP1Q5TC63 336 aa24.36■■□□□ 1.49
CPNE1-207ENST00000414664 FIGLAQ6QHK4 219 aa24.36■■□□□ 1.49
CPNE1-207ENST00000414664 GPR155Q7Z3F1 870 aa24.36■■□□□ 1.49
CPNE1-207ENST00000414664 VASH2Q86V25 355 aa24.36■■□□□ 1.49
CPNE1-207ENST00000414664 FAM20CQ8IXL6 584 aa24.36■■□□□ 1.49
CPNE1-207ENST00000414664 IFT20Q8IY31 132 aa24.36■■□□□ 1.49
CPNE1-207ENST00000414664 SYTL1Q8IYJ3 562 aa24.36■■□□□ 1.49
CPNE1-207ENST00000414664 GPR135Q8IZ08 494 aa24.36■■□□□ 1.49
CPNE1-207ENST00000414664 ZSCAN1Q8NBB4 408 aa24.36■■□□□ 1.49
CPNE1-207ENST00000414664 OR2A1Q8NGT9 310 aa24.36■■□□□ 1.49
CPNE1-207ENST00000414664 CCDC138Q96M89 665 aa24.36■■□□□ 1.49
CPNE1-207ENST00000414664 RBBP8Q99708 897 aa24.36■■□□□ 1.49
CPNE1-207ENST00000414664 TRIM54Q9BYV2 358 aa24.36■■□□□ 1.49
CPNE1-207ENST00000414664 PADI1Q9ULC6 663 aa24.36■■□□□ 1.49
CPNE1-207ENST00000414664 PCDHB3Q9Y5E6 796 aa24.36■■□□□ 1.49
CPNE1-207ENST00000414664 A0A1W2PPV9 198 aa24.35■■□□□ 1.49
CPNE1-207ENST00000414664 E7EQ34 232 aa24.35■■□□□ 1.49
CPNE1-207ENST00000414664 K7ENP7 123 aa24.35■■□□□ 1.49
CPNE1-207ENST00000414664 TSPAN12O95859 305 aa24.35■■□□□ 1.49
CPNE1-207ENST00000414664 ZNF37AP17032 561 aaPredicted RBP24.35■■□□□ 1.49
CPNE1-207ENST00000414664 CMPK1P30085 196 aa24.35■■□□□ 1.49
CPNE1-207ENST00000414664 SPRP35270 261 aaPredicted RBP24.35■■□□□ 1.49
CPNE1-207ENST00000414664 TAS2R39P59534 338 aa24.35■■□□□ 1.49
CPNE1-207ENST00000414664 TSTA3Q13630 321 aaPredicted RBP24.35■■□□□ 1.49
CPNE1-207ENST00000414664 ZC3H12BQ5HYM0 836 aaKnown RBP24.35■■□□□ 1.49
CPNE1-207ENST00000414664 INO80CQ6PI98 192 aaPredicted RBP24.35■■□□□ 1.49
CPNE1-207ENST00000414664 DNAJC22Q8N4W6 341 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms