RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 TRPC7Q9HCX4 862 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 IL23AQ9NPF7 189 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 GIN1Q9NXP7 522 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 SLC39A1Q9NY26 324 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 ASH2LQ9UBL3 628 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 ATP6V1HQ9UI12 483 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 INTS6Q9UL03 887 aaKnown RBP9.18□□□□□ -0.94
SNHG3-201ENST00000413987 CFL2Q9Y281 166 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 CDY1Q9Y6F8 540 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 LOC100506127A0A0U1RQW1 187 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 XPO1O14980 1071 aaKnown RBP9.17□□□□□ -0.94
SNHG3-201ENST00000413987 ADAM23O75077 832 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 IPO13O94829 963 aaKnown RBP9.17□□□□□ -0.94
SNHG3-201ENST00000413987 LSM8O95777 96 aaKnown RBP9.17□□□□□ -0.94
SNHG3-201ENST00000413987 PDGFBP01127 241 aaPredicted RBP9.17□□□□□ -0.94
SNHG3-201ENST00000413987 APOEP02649 317 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 C1QAP02745 245 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 GSTT2P0CG29 244 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 GSTT2BP0CG30 244 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 FGF3P11487 239 aaPredicted RBP9.17□□□□□ -0.94
SNHG3-201ENST00000413987 ZNF26P17031 533 aaPredicted RBP9.17□□□□□ -0.94
SNHG3-201ENST00000413987 ME2P23368 584 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 CDH5P33151 784 aaPredicted RBP9.17□□□□□ -0.94
SNHG3-201ENST00000413987 SLC16A1P53985 500 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 FPGSQ05932 587 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 KCNJ11Q14654 390 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 VARS2Q5ST30 1063 aaKnown RBP9.17□□□□□ -0.94
SNHG3-201ENST00000413987 FAM109BQ6ICB4 259 aaPredicted RBP9.17□□□□□ -0.94
SNHG3-201ENST00000413987 TRNP1Q6NT89 227 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 FUT10Q6P4F1 479 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 DEGS2Q6QHC5 323 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 ZCCHC23Q6ZST2 131 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 FRA10AC1Q70Z53 315 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 VASH2Q86V25 355 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 NUDT13Q86X67 352 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 XYLT1Q86Y38 959 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 DDIASQ8IXT1 998 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 ZNF679Q8IYX0 411 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 FAM181AQ8N9Y4 354 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 RP9Q8TA86 221 aaKnown RBP9.17□□□□□ -0.94
SNHG3-201ENST00000413987 C12orf43Q96C57 262 aaKnown RBP9.17□□□□□ -0.94
SNHG3-201ENST00000413987 ZNF778Q96MU6 729 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 RPRD1AQ96P16 312 aaPredicted RBP9.17□□□□□ -0.94
SNHG3-201ENST00000413987 ZFYVE21Q9BQ24 234 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 NUDT15Q9NV35 164 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 DCDC2Q9UHG0 476 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 RNF11Q9Y3C5 154 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 HEY1Q9Y5J3 304 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 SPACA6W5XKT8 324 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 MYOCOSA0A1B0GUC4 107 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 C3orf70A6NLC5 250 aaPredicted RBP9.17□□□□□ -0.94
SNHG3-201ENST00000413987 OR6C76A6NM76 312 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 APOC4-APOC2K7ER74 178 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 PSMD12O00232 456 aaPredicted RBP9.17□□□□□ -0.94
SNHG3-201ENST00000413987 ADAM12O43184 909 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 DCXO43602 365 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 NPHS1O60500 1241 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 ZBTB11O95625 1053 aaPredicted RBP9.17□□□□□ -0.94
SNHG3-201ENST00000413987 APOC2P02655 101 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 AMHP03971 560 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 MYOGP15173 224 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 NME2P22392 152 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 CYP2F1P24903 491 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 ALDH7A1P49419 539 aaKnown RBP9.17□□□□□ -0.94
SNHG3-201ENST00000413987 HARS2P49590 506 aaKnown RBP9.17□□□□□ -0.94
SNHG3-201ENST00000413987 GPR15P49685 360 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 NPY4RP50391 375 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 SUMO3P55854 103 aaPredicted RBP9.17□□□□□ -0.94
SNHG3-201ENST00000413987 HSPA14Q0VDF9 509 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 TAZQ16635 292 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 NDUFA5Q16718 116 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 RGS21Q2M5E4 152 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 MGAT5BQ3V5L5 792 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 PIGGQ5H8A4 983 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 RANBP10Q6VN20 620 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 CLEC20AQ6ZU45 233 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 OVCH1Q7RTY7 1134 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 FAM35AQ86V20 835 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 PGAM4Q8N0Y7 254 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 SCAMP5Q8TAC9 235 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 SLC35F5Q8WV83 523 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 FAF2Q96CS3 445 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 PHF21BQ96EK2 531 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 SLC6A18Q96N87 628 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 SMOQ99835 787 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 GDF15Q99988 308 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 NAA11Q9BSU3 229 aaPredicted RBP9.17□□□□□ -0.94
SNHG3-201ENST00000413987 TDRD1Q9BXT4 1180 aaKnown RBP9.17□□□□□ -0.94
SNHG3-201ENST00000413987 TWSG1Q9GZX9 223 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 LHX5Q9H2C1 402 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 ZNF576Q9H609 170 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 MAGEE1Q9HCI5 957 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 HACD3Q9P035 362 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 PAK5Q9P286 719 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 HESX1Q9UBX0 185 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 KLHL3Q9UH77 587 aa9.17□□□□□ -0.94
SNHG3-201ENST00000413987 MYO7AQ13402 2215 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 A0A1B0GWJ7 208 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 TCRBV5S1A1TA0A578 114 aa9.16□□□□□ -0.94
SNHG3-201ENST00000413987 SMIM30A4D0T7 59 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms