RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 PLA2G16P53816 162 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 SLC18A1P54219 525 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 ALG11Q2TAA5 492 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 PGS1Q32NB8 556 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 ZDHHC20Q5W0Z9 365 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 SLC22A18ASQ8N1D0 253 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 AFAP1L2Q8N4X5 818 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 KLHDC7BQ96G42 594 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 RHBGQ9H310 441 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 MKS1Q9NXB0 559 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 SPHK1Q9NYA1 384 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 POLG2Q9UHN1 485 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 COPG1Q9Y678 874 aaKnown RBP9.43□□□□□ -0.9
SMPD4-203ENST00000412570 A0A1B0GVT2 93 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 GLOD5A6NK44 160 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 WASHC1A8K0Z3 465 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 NME6O75414 186 aaPredicted RBP9.43□□□□□ -0.9
SMPD4-203ENST00000412570 PAPLNO95428 1278 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 C1orf105O95561 183 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 PDYNP01213 254 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 KRT16P08779 473 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 MYCLP1P12525 358 aaPredicted RBP9.43□□□□□ -0.9
SMPD4-203ENST00000412570 RPS3P23396 243 aaKnown RBP eCLIP9.43□□□□□ -0.9
SMPD4-203ENST00000412570 SRP54P61011 504 aaKnown RBP9.43□□□□□ -0.9
SMPD4-203ENST00000412570 BNIP3Q12983 259 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 RFTN2Q52LD8 501 aaPredicted RBP9.43□□□□□ -0.9
SMPD4-203ENST00000412570 WASH2PQ6VEQ5 465 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 GCNT7Q6ZNI0 430 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 CEP68Q76N32 757 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 SHISA5Q8N114 240 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 DTWD1Q8N5C7 304 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 METTL27Q8N6F8 245 aaPredicted RBP9.43□□□□□ -0.9
SMPD4-203ENST00000412570 KRTCAP2Q8N6L1 136 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 AGAP11Q8TF27 550 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 CCDC126Q96EE4 140 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 MAGED4Q96JG8 741 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 TEX37Q96LM6 180 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 PFDN4Q9NQP4 134 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 KCNK4Q9NYG8 393 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 NUDT4Q9NZJ9 180 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 GMEB2Q9UKD1 530 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 OARD1Q9Y530 152 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 GNG14A0A1W2PPG7 69 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 ALDH9A1P49189 494 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 SUOXP51687 545 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 NCALDP61601 193 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 UFM1P61960 85 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 DOC2AQ14183 400 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 SLBPQ14493 270 aaKnown RBP eCLIP9.43□□□□□ -0.9
SMPD4-203ENST00000412570 TMEM259Q4ZIN3 620 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 IL23RQ5VWK5 629 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 NKAIN2Q5VXU1 208 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 RDH11Q8TC12 318 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 PNPT1Q8TCS8 783 aaKnown RBP9.43□□□□□ -0.9
SMPD4-203ENST00000412570 LCN9Q8WX39 176 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 WDR92Q96MX6 357 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 OR2M4Q96R27 311 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 OR4K3Q96R72 315 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 TBC1D10AQ9BXI6 508 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 ZDHHC5Q9C0B5 715 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 CAPN10Q9HC96 672 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 ITM2CQ9NQX7 267 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 DNAJC11Q9NVH1 559 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 UCKL1Q9NWZ5 548 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 APOBEC3BQ9UH17 382 aaKnown RBP9.43□□□□□ -0.9
SMPD4-203ENST00000412570 LNPEPQ9UIQ6 1025 aa9.43□□□□□ -0.9
SMPD4-203ENST00000412570 IGHV1OR15-9A0A0B4J2B8 117 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 EIF4E1BA6NMX2 242 aaKnown RBP9.42□□□□□ -0.9
SMPD4-203ENST00000412570 SRRM3A6NNA2 597 aaPredicted RBP9.42□□□□□ -0.9
SMPD4-203ENST00000412570 KMOO15229 486 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 ALPPL2P10696 532 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 STX1BP61266 288 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 ILF3Q12906 894 aaKnown RBP eCLIP9.42□□□□□ -0.98e-7■■■□□ 15
SMPD4-203ENST00000412570 EPGNQ6UW88 154 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 CYP2U1Q7Z449 544 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 NRSN1Q8IZ57 195 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 DEFB107AQ8IZN7 70 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 PJA1Q8NG27 643 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 SHDQ96IW2 340 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 CORO1CQ9ULV4 474 aaPredicted RBP9.42□□□□□ -0.9
SMPD4-203ENST00000412570 SLC5A10A0PJK1 596 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 ZNF860A6NHJ4 632 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 TMEM114B3SHH9 223 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 BTN3A3O00478 584 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 ESRRBO95718 433 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 ALDOCP09972 364 aaKnown RBP9.42□□□□□ -0.9
SMPD4-203ENST00000412570 SYT13Q7L8C5 426 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 RBM15BQ8NDT2 890 aaKnown RBP9.42□□□□□ -0.9
SMPD4-203ENST00000412570 RHEBL1Q8TAI7 183 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 ZCCHC10Q8TBK6 192 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 DNAJB14Q8TBM8 379 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 KCNV2Q8TDN2 545 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 TMEM74BQ9NUR3 256 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 WSB2Q9NYS7 404 aaPredicted RBP9.42□□□□□ -0.9
SMPD4-203ENST00000412570 A0A0J9YVX5 310 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 AGAP14A8MT82 685 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 ZNF195O14628 629 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 OR1F1O43749 312 aa9.42□□□□□ -0.9
SMPD4-203ENST00000412570 WISP3O95389 354 aaPredicted RBP9.42□□□□□ -0.9
SMPD4-203ENST00000412570 T-ENOLP0DO92 83 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms