RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 FCHO2Q0JRZ9 810 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 TMEM132DQ14C87 1099 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 TAF13Q15543 124 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 PCGF3Q3KNV8 242 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 SPECC1Q5M775 1068 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 LYSMD4Q5XG99 296 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 TEX38Q6PEX7 206 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 KLHL35Q6PF15 583 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 NCEH1Q6PIU2 408 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 FAM198BQ6UWH4 519 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 INTS8Q75QN2 995 aaKnown RBP1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 CPLX4Q7Z7G2 160 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 GALNT5Q7Z7M9 940 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 ZFAND4Q86XD8 727 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 GPD1LQ8N335 351 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 METTL4Q8N3J2 472 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 WDTC1Q8N5D0 677 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 PIGBQ92521 554 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 ARHGEF2Q92974 986 aaKnown RBP1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 CEP295NLQ96MC4 621 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 FAM20AQ96MK3 541 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 CMTM3Q96MX0 182 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 SPAG5Q96R06 1193 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 RAD9AQ99638 391 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 CHCHD5Q9BSY4 110 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 FNDC11Q9BVV2 318 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 TEX13BQ9BXU2 312 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 YTHDF1Q9BYJ9 559 aaKnown RBP1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 PARLQ9H300 379 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 TUBB1Q9H4B7 451 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 B3GAT2Q9NPZ5 323 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 SERINC1Q9NRX5 453 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 LARSQ9P2J5 1176 aaKnown RBP1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 NENFQ9UMX5 172 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 STUB1Q9UNE7 303 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 PLCL2Q9UPR0 1127 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 LRRFIP2Q9Y608 721 aaKnown RBP1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 IGHV4-30-2A0A087WSY4 118 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 A8MZ25 164 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 IFRD1O00458 451 aaPredicted RBP1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 HS6ST1O60243 411 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 GLRA3O75311 464 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 HPP00738 406 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 XBP1P17861 261 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 CD27P26842 260 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 PON1P27169 355 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 ALDH1B1P30837 517 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 BSGP35613 385 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 PDX1P52945 283 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 TMF1P82094 1093 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 GUCY2DQ02846 1103 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 LMOD3Q0VAK6 560 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 LRMPQ12912 555 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 CDH18Q13634 790 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 EFTUD2Q15029 972 aaKnown RBP eCLIP1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 CA9Q16790 459 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 MTHFSDQ2M296 383 aaKnown RBP1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 LEKR1Q6ZMV7 388 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 TMPRSS11FQ6ZWK6 438 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 OR4N5Q8IXE1 308 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 RHOXF1Q8NHV9 184 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 ETNPPLQ8TBG4 499 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 SCLT1Q96NL6 688 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 WNT5BQ9H1J7 359 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 FAM207AQ9NSI2 230 aaPredicted RBP1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 IL17CQ9P0M4 197 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 ZNF69Q9UC07 566 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 AMACRQ9UHK6 382 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 NTNG1Q9Y2I2 539 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 TMED3Q9Y3Q3 217 aa1.05□□□□□ -2.24
RNU2-55P-201ENST00000411146 IGLV4-3A0A075B6K6 122 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 CCDC196A0A1B0GTZ2 297 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 TMEM221A6NGB7 291 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 RPL37AP8A6NKH3 93 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 CCL24O00175 119 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 CDX4O14627 284 aaPredicted RBP1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 SCAMP1O15126 338 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 EPHB6O15197 1021 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 TOMM70O94826 608 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 SLCO2B1O94956 709 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 AGR2O95994 175 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 SRPRAP08240 638 aaKnown RBP1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 GIG44P09565 113 aaPredicted RBP1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 TMEM11P17152 192 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 HLA-FP30511 346 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 MNDAP41218 407 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 TSFMP43897 325 aaKnown RBP1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 LYZP61626 148 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 TRA2AQ13595 282 aaKnown RBP eCLIP1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 IRF3Q14653 427 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 ZNF146Q15072 292 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 UGT3A2Q3SY77 523 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 GPR33Q49SQ1 333 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 LCN1P1Q5VSP4 162 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 GARNL3Q5VVW2 1013 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 LEMD1Q68G75 181 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 HAUS6Q7Z4H7 955 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 PXKQ7Z7A4 578 aa1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 LDB1Q86U70 411 aaPredicted RBP1.04□□□□□ -2.24
RNU2-55P-201ENST00000411146 ARID3BQ8IVW6 561 aaPredicted RBP1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms