RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 ARPC4P59998 168 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 PRAMEF14Q5SWL7 426 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 DENND5AQ6IQ26 1287 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 AHSA2Q719I0 299 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 DUSP9Q99956 384 aaKnown RBP8.24□□□□□ -1.09
SCN9A-203ENST00000409672 FN3KQ9H479 309 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 CORO1CQ9ULV4 474 aaPredicted RBP8.24□□□□□ -1.09
SCN9A-203ENST00000409672 PCDHB1Q9Y5F3 818 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 C5orf60A6NFR6 353 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 CLDN7O95471 211 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 S100A9P06702 114 aaKnown RBP8.24□□□□□ -1.09
SCN9A-203ENST00000409672 ZBTB48P10074 688 aaPredicted RBP8.24□□□□□ -1.09
SCN9A-203ENST00000409672 PIM1P11309 404 aaPredicted RBP8.24□□□□□ -1.09
SCN9A-203ENST00000409672 PREPP48147 710 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 CSTF1Q05048 431 aaKnown RBP8.24□□□□□ -1.09
SCN9A-203ENST00000409672 EIF2S3LQ2VIR3 472 aaKnown RBP8.24□□□□□ -1.09
SCN9A-203ENST00000409672 LAS2Q8IYD9 372 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 FAM47BQ8NA70 645 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 OR13C4Q8NGS5 318 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 PIWIL2Q8TC59 973 aaKnown RBP8.24□□□□□ -1.09
SCN9A-203ENST00000409672 KCNC2Q96PR1 638 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 SLC39A3Q9BRY0 314 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 FEM1AQ9BSK4 669 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 PDP2Q9P2J9 529 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 CDC14AQ9UNH5 594 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 NDST3O95803 873 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 RB1P06400 928 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 CTBP2P56545 445 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 FMO1Q01740 532 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 SLC34A1Q06495 639 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 TIMM50Q3ZCQ8 353 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 GLYATQ6IB77 296 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 YIPF7Q8N8F6 280 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 OR8S1Q8NH09 359 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 TMEM203Q969S6 136 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 XKR8Q9H6D3 395 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 OR6C74A6NCV1 312 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 RFPL2O75678 378 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 FABP3P05413 133 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 S100A1P23297 94 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 ABRAXAS1Q6UWZ7 409 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 TMEM192Q8IY95 271 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 DQX1Q8TE96 717 aaKnown RBP8.23□□□□□ -1.09
SCN9A-203ENST00000409672 CITED4Q96RK1 184 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.23□□□□□ -1.09
SCN9A-203ENST00000409672 ETS2P15036 469 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 BDH1Q02338 343 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 LAPTM5Q13571 262 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 DHDDSQ86SQ9 333 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 ILDR1Q86SU0 546 aaPredicted RBP8.23□□□□□ -1.09
SCN9A-203ENST00000409672 XYLT1Q86Y38 959 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 DTX3Q8N9I9 347 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 PNLDC1Q8NA58 520 aaKnown RBP8.23□□□□□ -1.09
SCN9A-203ENST00000409672 AP3S1Q92572 193 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 HINT2Q9BX68 163 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 ZNF639Q9UID6 485 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 UBIAD1Q9Y5Z9 338 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 FAM149AA5PLN7 773 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 FADS2P1A8MWK0 482 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 ARPINQ7Z6K5 226 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 ZNF565Q8N9K5 539 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 ASPNQ9BXN1 380 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 HRASLS2Q9NWW9 162 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 STOX2Q9P2F5 926 aaPredicted RBP8.23□□□□□ -1.09
SCN9A-203ENST00000409672 CRNNQ9UBG3 495 aaPredicted RBP8.23□□□□□ -1.09
SCN9A-203ENST00000409672 NCANO14594 1321 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 C13orf42A0A1B0GVH6 325 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 VILLO15195 856 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 S100A6P06703 90 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 JUNDP17535 347 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 MTPNP58546 118 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 SLC26A5P58743 744 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 CHRNA6Q15825 494 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 PDK4Q16654 411 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 TEX44Q53QW1 395 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 ARSHQ5FYA8 562 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 SLC9B2Q86UD5 537 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 ZNF676Q8N7Q3 588 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 PLD4Q96BZ4 506 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 MNTQ99583 582 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 ZNF670Q9BS34 389 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 MKKSQ9NPJ1 570 aaPredicted RBP8.23□□□□□ -1.09
SCN9A-203ENST00000409672 SLC17A7Q9P2U7 560 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 H3BUI4 141 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 OGDHQ02218 1023 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 C6orf52Q5T4I8 152 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 BROXQ5VW32 411 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 OGFOD2Q6N063 350 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 SRFBP1Q8NEF9 429 aaKnown RBP8.23□□□□□ -1.09
SCN9A-203ENST00000409672 OR2T12Q8NG77 320 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 LNX1Q8TBB1 728 aaPredicted RBP8.23□□□□□ -1.09
SCN9A-203ENST00000409672 TNFRSF25Q93038 417 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 TM9SF2Q99805 663 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 LGR4Q9BXB1 951 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 GBA3Q9H227 469 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 MAPRE3Q9UPY8 281 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 MYH13Q9UKX3 1938 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 ZNF521Q96K83 1311 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 CYP3A7-CYP3A51PA0A087WV96 503 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 TEX46H3BTG2 121 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms