RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 CIPCQ9C0C6 399 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 DPEP3Q9H4B8 488 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 NME4O00746 187 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 FFAR2O15552 330 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 CNTN5O94779 1100 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 C1RP00736 705 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 TMEM132BQ14DG7 1078 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 SLC36A3Q495N2 470 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 TECRLQ5HYJ1 363 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 AGAP7PQ5VUJ5 663 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 GEMIN6Q8WXD5 167 aaKnown RBP17.28■□□□□ 0.36
SMPD4-202ENST00000409031 DEDD2Q8WXF8 326 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 CDK15Q96Q40 435 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 FZD8Q9H461 694 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 VRTNQ9H8Y1 702 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 IL1RAPQ9NPH3 570 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 RAI2Q9Y5P3 530 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 TCRBV3S1A0A5B6 114 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 DNTTP04053 509 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 SLC35E2BP0CK96 405 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 SNRPD1P62314 119 aaKnown RBP17.28■□□□□ 0.36
SMPD4-202ENST00000409031 CXCL9Q07325 125 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 C6orf136Q5SQH8 315 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 METTL3Q86U44 580 aaKnown RBP17.28■□□□□ 0.36
SMPD4-202ENST00000409031 NOXA1Q86UR1 476 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 PHACTR4Q8IZ21 702 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 SPARTQ8N0X7 666 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 MGLLQ99685 303 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 ABHD16BQ9H3Z7 469 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 ZFYVE1Q9HBF4 777 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 ERVK13-1Q9NX77 482 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 RABL2AQ9UBK7 228 aaPredicted RBP17.28■□□□□ 0.36
SMPD4-202ENST00000409031 KIAA0513O60268 411 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 DIRAS1O95057 198 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 HNMTP50135 292 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 SPANXN4Q5MJ08 99 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 ATG9BQ674R7 924 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 OAFQ86UD1 273 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 KLHL36Q8N4N3 616 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 KDM1BQ8NB78 822 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 CLEC4DQ8WXI8 215 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 TMEM80Q96HE8 168 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 HSH2DQ96JZ2 352 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 RANBP9Q96S59 729 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 MKRN2Q9H000 416 aaKnown RBP17.28■□□□□ 0.36
SMPD4-202ENST00000409031 TMLHEQ9NVH6 421 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 PCDH10Q9P2E7 1040 aa17.28■□□□□ 0.36
SMPD4-202ENST00000409031 MSCO60682 206 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 EEDO75530 441 aaKnown RBP17.27■□□□□ 0.36
SMPD4-202ENST00000409031 RPL4P36578 427 aaKnown RBP17.27■□□□□ 0.36
SMPD4-202ENST00000409031 RPP38P78345 283 aaKnown RBP17.27■□□□□ 0.36
SMPD4-202ENST00000409031 IL10RBQ08334 325 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 PON2Q15165 354 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 LRRC66Q68CR7 880 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 TRAPPC5Q8IUR0 188 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 OR7G1Q8NGA0 311 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 CEP76Q8TAP6 659 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 FOLH1BQ9HBA9 442 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 MRM3Q9HC36 420 aaKnown RBP17.27■□□□□ 0.36
SMPD4-202ENST00000409031 PCDHAC2Q9Y5I4 1007 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 GRID2O43424 1007 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 NDUFV1P49821 464 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 ZNF132P52740 706 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 PPP3R1P63098 170 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 MBTD1Q05BQ5 628 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 MFSD10Q14728 455 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 BEND5Q7L4P6 421 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 PHC3Q8NDX5 983 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 RTP4Q96DX8 246 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 CCDC115Q96NT0 180 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 FCRL3Q96P31 734 aaPredicted RBP17.27■□□□□ 0.36
SMPD4-202ENST00000409031 SLC2A6Q9UGQ3 507 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 CLCA3PQ9Y6N3 262 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 IFT172Q9UG01 1749 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 LCHNA4D1U4 455 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 MTRF1O75570 445 aaKnown RBP17.27■□□□□ 0.36
SMPD4-202ENST00000409031 ALDH2P05091 517 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 ALDH3B2P48448 385 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 PIGXQ8TBF5 258 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 EBPLQ9BY08 206 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 RIMKLBQ9ULI2 386 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 SNX10Q9Y5X0 201 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 STYXL1Q9Y6J8 313 aa17.27■□□□□ 0.36
SMPD4-202ENST00000409031 METTL21EPA6NDL7 271 aa17.27■□□□□ 0.35
SMPD4-202ENST00000409031 HNRNPA0Q13151 305 aaKnown RBP17.27■□□□□ 0.35
SMPD4-202ENST00000409031 CAPN13Q6MZZ7 669 aaPredicted RBP17.27■□□□□ 0.35
SMPD4-202ENST00000409031 TSPYL5Q86VY4 417 aaPredicted RBP17.27■□□□□ 0.35
SMPD4-202ENST00000409031 STX12Q86Y82 276 aa17.27■□□□□ 0.35
SMPD4-202ENST00000409031 SETD6Q8TBK2 473 aa17.27■□□□□ 0.35
SMPD4-202ENST00000409031 KCNA7Q96RP8 456 aa17.27■□□□□ 0.35
SMPD4-202ENST00000409031 DERL2Q9GZP9 239 aa17.27■□□□□ 0.35
SMPD4-202ENST00000409031 AGPAT4Q9NRZ5 378 aa17.27■□□□□ 0.35
SMPD4-202ENST00000409031 YJEFN3A6XGL0 299 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 DCLK1O15075 740 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 PRKACAP17612 351 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 OLIG2Q13516 323 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 LAPTM4AQ15012 233 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 FAM171A1Q5VUB5 890 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 CHADLQ6NUI6 762 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 ITIH5Q86UX2 942 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms