RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 PAK4O96013 591 aaPredicted RBP18.4■□□□□ 0.54
USP39-202ENST00000409025 SLC6A2P23975 617 aa18.4■□□□□ 0.54
USP39-202ENST00000409025 ACADLP28330 430 aa18.4■□□□□ 0.54
USP39-202ENST00000409025 HNF4AP41235 474 aa18.4■□□□□ 0.54
USP39-202ENST00000409025 ATXN3P54252 364 aaPredicted RBP18.4■□□□□ 0.54
USP39-202ENST00000409025 MRPS22P82650 360 aaKnown RBP18.4■□□□□ 0.54
USP39-202ENST00000409025 DOC2AQ14183 400 aa18.4■□□□□ 0.54
USP39-202ENST00000409025 SPATS1Q496A3 300 aa18.4■□□□□ 0.54
USP39-202ENST00000409025 GRHL2Q6ISB3 625 aa18.4■□□□□ 0.54
USP39-202ENST00000409025 CAPN13Q6MZZ7 669 aaPredicted RBP18.4■□□□□ 0.54
USP39-202ENST00000409025 KIAA1161Q6NSJ0 714 aa18.4■□□□□ 0.54
USP39-202ENST00000409025 FAM83HQ6ZRV2 1179 aaPredicted RBP18.4■□□□□ 0.54
USP39-202ENST00000409025 SPATA24Q86W54 205 aa18.4■□□□□ 0.54
USP39-202ENST00000409025 SLC15A3Q8IY34 581 aa18.4■□□□□ 0.54
USP39-202ENST00000409025 SYTL1Q8IYJ3 562 aa18.4■□□□□ 0.54
USP39-202ENST00000409025 TP53I13Q8NBR0 393 aaPredicted RBP18.4■□□□□ 0.54
USP39-202ENST00000409025 GLB1L3Q8NCI6 653 aaPredicted RBP18.4■□□□□ 0.54
USP39-202ENST00000409025 ZNF480Q8WV37 535 aa18.4■□□□□ 0.54
USP39-202ENST00000409025 DNAJC9Q8WXX5 260 aa18.4■□□□□ 0.54
USP39-202ENST00000409025 OR4K3Q96R72 315 aa18.4■□□□□ 0.54
USP39-202ENST00000409025 PCDHAC1Q9H158 963 aa18.4■□□□□ 0.54
USP39-202ENST00000409025 OR52A5Q9H2C5 316 aa18.4■□□□□ 0.54
USP39-202ENST00000409025 TRPV5Q9NQA5 729 aa18.4■□□□□ 0.54
USP39-202ENST00000409025 GPRC5BQ9NZH0 403 aa18.4■□□□□ 0.54
USP39-202ENST00000409025 PSMD13Q9UNM6 376 aa18.4■□□□□ 0.54
USP39-202ENST00000409025 PCYT1BQ9Y5K3 369 aaPredicted RBP18.4■□□□□ 0.54
USP39-202ENST00000409025 KCNE2Q9Y6J6 123 aa18.4■□□□□ 0.54
USP39-202ENST00000409025 PIAS3Q9Y6X2 628 aa18.4■□□□□ 0.54
USP39-202ENST00000409025 PRR23AA6NEV1 266 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 GPR89AB7ZAQ6 455 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 NPIPB8E9PQR5 432 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 ADAM23O75077 832 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 GPR89BP0CG08 455 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 DRD1P21728 446 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 MAPK1P28482 360 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 PTGR1Q14914 329 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 KIAA0040Q15053 153 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 USP39Q53GS9 565 aaKnown RBP18.39■□□□□ 0.53
USP39-202ENST00000409025 DPP10Q8N608 796 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 KLK6Q92876 244 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 FAM131CQ96AQ9 280 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 RSRC1Q96IZ7 334 aaKnown RBP18.39■□□□□ 0.53
USP39-202ENST00000409025 C1QTNF2Q9BXJ5 285 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 ZDHHC5Q9C0B5 715 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 C8orf33Q9H7E9 229 aaPredicted RBP18.39■□□□□ 0.53
USP39-202ENST00000409025 ITM2CQ9NQX7 267 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 PHPT1Q9NRX4 125 aaPredicted RBP18.39■□□□□ 0.53
USP39-202ENST00000409025 TMED5Q9Y3A6 229 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 ATG2BQ96BY7 2078 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 A0A1W2PQF6 199 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 KMOO15229 486 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 PRPS2P11908 318 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 BCKDHAP12694 445 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 PCSK2P16519 638 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 CD22P20273 847 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 TRIM23P36406 574 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 GRSF1Q12849 480 aaKnown RBP eCLIP18.39■□□□□ 0.53
USP39-202ENST00000409025 CSTF3Q12996 717 aaKnown RBP18.39■□□□□ 0.53
USP39-202ENST00000409025 FGL2Q14314 439 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 SLC2A7Q6PXP3 512 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 RNF111Q6ZNA4 994 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 PDZD3Q86UT5 571 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 FAM9CQ8IZT9 166 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 OXR1Q8N573 874 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 C1QTNF7Q9BXJ2 289 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 SLC6A17Q9H1V8 727 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 CMTM6Q9NX76 183 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 SCML1Q9UN30 329 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 OR1A2Q9Y585 309 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 PCDHA9Q9Y5H5 950 aa18.39■□□□□ 0.53
USP39-202ENST00000409025 A0A1W2PQU0 124 aa18.38■□□□□ 0.53
USP39-202ENST00000409025 H0YIV9 168 aa18.38■□□□□ 0.53
USP39-202ENST00000409025 RNGTTO60942 597 aaKnown RBP18.38■□□□□ 0.53
USP39-202ENST00000409025 HSD17B1P14061 328 aa18.38■□□□□ 0.53
USP39-202ENST00000409025 COL9A1P20849 921 aa18.38■□□□□ 0.53
USP39-202ENST00000409025 TBPL1P62380 186 aa18.38■□□□□ 0.53
USP39-202ENST00000409025 SUSD1Q6UWL2 747 aa18.38■□□□□ 0.53
USP39-202ENST00000409025 PRR23BQ6ZRT6 265 aa18.38■□□□□ 0.53
USP39-202ENST00000409025 DNAJB14Q8TBM8 379 aa18.38■□□□□ 0.53
USP39-202ENST00000409025 WDR20Q8TBZ3 569 aa18.38■□□□□ 0.53
USP39-202ENST00000409025 SLC17A9Q9BYT1 436 aa18.38■□□□□ 0.53
USP39-202ENST00000409025 SLC23A2Q9UGH3 650 aa18.38■□□□□ 0.53
USP39-202ENST00000409025 ASF1AQ9Y294 204 aa18.38■□□□□ 0.53
USP39-202ENST00000409025 DYRK1BQ9Y463 629 aa18.38■□□□□ 0.53
USP39-202ENST00000409025 C15orf38-AP3S2A0A0A6YYH1 394 aa18.37■□□□□ 0.53
USP39-202ENST00000409025 KLHL33A6NCF5 533 aa18.37■□□□□ 0.53
USP39-202ENST00000409025 IGFBP4P22692 258 aa18.37■□□□□ 0.53
USP39-202ENST00000409025 DGKQP52824 942 aa18.37■□□□□ 0.53
USP39-202ENST00000409025 TMEM259Q4ZIN3 620 aa18.37■□□□□ 0.53
USP39-202ENST00000409025 C6orf10Q5SRN2 563 aa18.37■□□□□ 0.53
USP39-202ENST00000409025 ARPINQ7Z6K5 226 aa18.37■□□□□ 0.53
USP39-202ENST00000409025 TMEM125Q96AQ2 219 aa18.37■□□□□ 0.53
USP39-202ENST00000409025 OSBPL6Q9BZF3 934 aa18.37■□□□□ 0.53
USP39-202ENST00000409025 VCX3BQ9H321 246 aa18.37■□□□□ 0.53
USP39-202ENST00000409025 SGK2Q9HBY8 427 aa18.37■□□□□ 0.53
USP39-202ENST00000409025 C6orf203Q9P0P8 240 aaPredicted RBP18.37■□□□□ 0.53
USP39-202ENST00000409025 REV3LO60673 3130 aa18.37■□□□□ 0.53
USP39-202ENST00000409025 COL4A2P08572 1712 aa18.37■□□□□ 0.53
USP39-202ENST00000409025 C2CD4DB7Z1M9 353 aa18.37■□□□□ 0.53
USP39-202ENST00000409025 IL6P05231 212 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms